RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 ABHD14BQ96IU4 210 aa12.12□□□□□ -0.47
ACTB-202ENST00000414620 LPAR5Q9H1C0 372 aa12.12□□□□□ -0.47
ACTB-202ENST00000414620 OR1A1Q9P1Q5 309 aa12.12□□□□□ -0.47
ACTB-202ENST00000414620 SLC23A1Q9UHI7 598 aa12.12□□□□□ -0.47
ACTB-202ENST00000414620 LRRC42Q9Y546 428 aa12.12□□□□□ -0.47
ACTB-202ENST00000414620 TRAV41A0A0B4J266 112 aa12.11□□□□□ -0.47
ACTB-202ENST00000414620 PPIFP30405 207 aaKnown RBP12.11□□□□□ -0.47
ACTB-202ENST00000414620 ECI1P42126 302 aa12.11□□□□□ -0.47
ACTB-202ENST00000414620 CLDN12P56749 244 aa12.11□□□□□ -0.47
ACTB-202ENST00000414620 HLA-DRB3P79483 266 aa12.11□□□□□ -0.47
ACTB-202ENST00000414620 NDPQ00604 133 aa12.11□□□□□ -0.47
ACTB-202ENST00000414620 LY6G6FQ5SQ64 297 aa12.11□□□□□ -0.47
ACTB-202ENST00000414620 TMEM65Q6PI78 240 aa12.11□□□□□ -0.47
ACTB-202ENST00000414620 TMEM91Q6ZNR0 172 aa12.11□□□□□ -0.47
ACTB-202ENST00000414620 MOB1BQ7L9L4 216 aa12.11□□□□□ -0.47
ACTB-202ENST00000414620 B9D2Q9BPU9 175 aa12.11□□□□□ -0.47
ACTB-202ENST00000414620 URM1Q9BTM9 101 aaKnown RBP12.11□□□□□ -0.47
ACTB-202ENST00000414620 CCDC90BQ9GZT6 254 aa12.11□□□□□ -0.47
ACTB-202ENST00000414620 FBXL15Q9H469 300 aa12.11□□□□□ -0.47
ACTB-202ENST00000414620 PIPOXQ9P0Z9 390 aa12.11□□□□□ -0.47
ACTB-202ENST00000414620 ZNF580Q9UK33 172 aa12.11□□□□□ -0.47
ACTB-202ENST00000414620 TPRKBQ9Y3C4 175 aa12.11□□□□□ -0.47
ACTB-202ENST00000414620 FBXO7Q9Y3I1 522 aa12.11□□□□□ -0.47
ACTB-202ENST00000414620 SLC17A2O00624 439 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 RAB29O14966 203 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 NDUFA3O95167 84 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 CT45A6P0DMU7 189 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 CT45A5P0DMU8 189 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 CT45A7P0DMV0 189 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 ARSBP15848 533 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 GNB1P62873 340 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 FHL3Q13643 280 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 PLGLAQ15195 96 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 LIN54Q6MZP7 749 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 FAM71F2Q6NXP2 309 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 ZNF491Q8N8L2 437 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 NPBQ8NG41 125 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 MYOZ3Q8TDC0 251 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 ABHD5Q8WTS1 349 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 CASTOR1Q8WTX7 329 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 A3GALT2U3KPV4 340 aa12.1□□□□□ -0.47
ACTB-202ENST00000414620 A0A1W2PN81 502 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 H7C2Y5 167 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 HSPA12AO43301 675 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 RGS10O43665 173 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 RAMP3O60896 148 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 SCTP09683 121 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 CD37P11049 281 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 CHRNA7P36544 502 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 MAP2K4P45985 399 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 VEGFCP49767 419 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 KIAA0141Q14154 515 aaPredicted RBP12.09□□□□□ -0.47
ACTB-202ENST00000414620 RAB11BQ15907 218 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 ZNF260Q3ZCT1 412 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 ASPHD1Q5U4P2 390 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 ARHGAP5-AS1Q96IT6 56 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 UBE2E2Q96LR5 201 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 ALX4Q9H161 411 aaPredicted RBP12.09□□□□□ -0.47
ACTB-202ENST00000414620 ZMAT5Q9UDW3 170 aaKnown RBP12.09□□□□□ -0.47
ACTB-202ENST00000414620 RNF150Q9ULK6 438 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 VSIG4Q9Y279 399 aa12.09□□□□□ -0.47
ACTB-202ENST00000414620 OR5H14A6NHG9 310 aa12.08□□□□□ -0.48
ACTB-202ENST00000414620 H0YJW9 148 aa12.08□□□□□ -0.48
ACTB-202ENST00000414620 RRHO14718 337 aa12.08□□□□□ -0.48
ACTB-202ENST00000414620 IGLV1-40P01703 118 aa12.08□□□□□ -0.48
ACTB-202ENST00000414620 GSTP1P09211 210 aaKnown RBP12.08□□□□□ -0.48
ACTB-202ENST00000414620 SNRPBP14678 240 aaKnown RBP12.08□□□□□ -0.48
ACTB-202ENST00000414620 CALRP27797 417 aaKnown RBP12.08□□□□□ -0.48
ACTB-202ENST00000414620 CEACAM6P40199 344 aa12.08□□□□□ -0.48
ACTB-202ENST00000414620 FABP5Q01469 135 aa12.08□□□□□ -0.48
ACTB-202ENST00000414620 TPBGQ13641 420 aa12.08□□□□□ -0.48
ACTB-202ENST00000414620 HES5Q5TA89 166 aa12.08□□□□□ -0.48
ACTB-202ENST00000414620 DRAXINQ8NBI3 349 aaPredicted RBP12.08□□□□□ -0.48
ACTB-202ENST00000414620 OR1N2Q8NGR9 330 aa12.08□□□□□ -0.48
ACTB-202ENST00000414620 CLCC1Q96S66 551 aa12.08□□□□□ -0.48
ACTB-202ENST00000414620 CHCHD6Q9BRQ6 235 aa12.08□□□□□ -0.48
ACTB-202ENST00000414620 PECRQ9BY49 303 aa12.08□□□□□ -0.48
ACTB-202ENST00000414620 C11orf54Q9H0W9 315 aaPredicted RBP12.08□□□□□ -0.48
ACTB-202ENST00000414620 DUSP21Q9H596 190 aa12.08□□□□□ -0.48
ACTB-202ENST00000414620 SCOCQ9UIL1 159 aa12.08□□□□□ -0.48
ACTB-202ENST00000414620 DNAH9Q9NYC9 4486 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 TRBV6-6A0A0A6YYG2 114 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 FOXI3A8MTJ6 420 aaPredicted RBP12.07□□□□□ -0.48
ACTB-202ENST00000414620 I3L521 148 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 FCN1O00602 326 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 SOX15O60248 233 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 ARL6IP5O75915 188 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 LY86O95711 162 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 OR8U8P0C7N1 319 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 CPEP16870 476 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 RAB9AP51151 201 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 TMEM50BP56557 158 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 LINC00205P59089 165 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 ZNF616Q08AN1 781 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 MLLT11Q13015 90 aaPredicted RBP12.07□□□□□ -0.48
ACTB-202ENST00000414620 PLA2G7Q13093 441 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 DCTN2Q13561 401 aaKnown RBP12.07□□□□□ -0.48
ACTB-202ENST00000414620 TRAM1Q15629 374 aa12.07□□□□□ -0.48
ACTB-202ENST00000414620 CMSS1Q9BQ75 279 aaKnown RBP12.07□□□□□ -0.48
ACTB-202ENST00000414620 FAM103A1Q9BTL3 118 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms