RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 FAM71F2Q6NXP2 309 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 Q6ZPA2 131 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 ZNF833PQ6ZTB9 187 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 ZNF329Q86UD4 541 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 COMMD1Q8N668 190 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 Q8N9W7 124 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 PHF21AQ96BD5 680 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 NOL4LQ96MY1 436 aaPredicted RBP8.87□□□□□ -0.99
RFFL-204ENST00000414419 NABP2Q9BQ15 211 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 CHCHD6Q9BRQ6 235 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 MRPL20Q9BYC9 149 aaKnown RBP8.87□□□□□ -0.99
RFFL-204ENST00000414419 OR51E2Q9H255 320 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 VCX3AQ9NNX9 186 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 DAPK2Q9UIK4 370 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 ADARB2-AS1A8MUL3 147 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 ITGB1BP1O14713 200 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 SLC2A2P11168 524 aaPredicted RBP8.86□□□□□ -0.99
RFFL-204ENST00000414419 HIST1H1DP16402 221 aaKnown RBP8.86□□□□□ -0.99
RFFL-204ENST00000414419 CD36P16671 472 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 CD33P20138 364 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 SOX6P35712 828 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 GPR12P47775 334 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 SERPINB10P48595 397 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 F2RL1P55085 397 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 ACTBP60709 375 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 KIR2DS1Q14954 304 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 TCTEX1D4Q5JR98 221 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 C10orf99Q6UWK7 81 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 NR2C2APQ86WQ0 139 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 C1QL4Q86Z23 238 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 STPG2Q8N412 459 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 OR4A4PQ8NGN8 299 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 ABHD14BQ96IU4 210 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 CENPOQ9BU64 300 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 C11orf54Q9H0W9 315 aaPredicted RBP8.86□□□□□ -0.99
RFFL-204ENST00000414419 IFI27L2Q9H2X8 130 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 PLSCR3Q9NRY6 295 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 OR1A1Q9P1Q5 309 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 KIAA1456Q9P272 454 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 ZNF221Q9UK13 617 aa8.86□□□□□ -0.99
RFFL-204ENST00000414419 MEGF8Q7Z7M0 2845 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 OR5H14A6NHG9 310 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 H7C2Y5 167 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 RAB27BO00194 218 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 MFNGO00587 321 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 BET1O15155 118 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 FABP7O15540 132 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 WIPF1O43516 503 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 SCGNO76038 276 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 TNFAIP8O95379 198 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 FCGR3AP08637 254 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 GSTP1P09211 210 aaKnown RBP8.85□□□□□ -0.99
RFFL-204ENST00000414419 VDAC1P21796 283 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 MC5RP33032 325 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 SDC2P34741 201 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 MXD1Q05195 221 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 PNLIPRP3Q17RR3 467 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 TIMM50Q3ZCQ8 353 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 RPL39P5Q59GN2 51 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 SFXN4Q6P4A7 337 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 TEX38Q6PEX7 206 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 FAM71E2Q8N5Q1 922 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 OR10J5Q8NHC4 309 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 ZFP57Q9NU63 452 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 RDH8Q9NYR8 311 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 ZNF107Q9UII5 783 aaPredicted RBP8.85□□□□□ -0.99
RFFL-204ENST00000414419 RNF150Q9ULK6 438 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 KCNK7Q9Y2U2 307 aa8.85□□□□□ -0.99
RFFL-204ENST00000414419 RBM7Q9Y580 266 aaKnown RBP8.85□□□□□ -0.99
RFFL-204ENST00000414419 A0A087WXM4 84 aa8.84□□□□□ -0.99
RFFL-204ENST00000414419 LINC01548A6NM66 108 aa8.84□□□□□ -0.99
RFFL-204ENST00000414419 NUDT19A8MXV4 375 aa8.84□□□□□ -0.99
RFFL-204ENST00000414419 G3V4G9 280 aa8.84□□□□□ -0.99
RFFL-204ENST00000414419 NBR2O15453 112 aa8.84□□□□□ -0.99
RFFL-204ENST00000414419 GSTT2P0CG29 244 aa8.84□□□□□ -0.99
RFFL-204ENST00000414419 GSTT2BP0CG30 244 aa8.84□□□□□ -0.99
RFFL-204ENST00000414419 PLGLAQ15195 96 aa8.84□□□□□ -0.99
RFFL-204ENST00000414419 CDNFQ49AH0 187 aa8.84□□□□□ -0.99
RFFL-204ENST00000414419 LIN54Q6MZP7 749 aa8.84□□□□□ -0.99
RFFL-204ENST00000414419 FAM131AQ6UXB0 335 aa8.84□□□□□ -0.99
RFFL-204ENST00000414419 TSPAN14Q8NG11 270 aa8.84□□□□□ -0.99
RFFL-204ENST00000414419 RBMXL1Q96E39 390 aaKnown RBP8.84□□□□□ -0.99
RFFL-204ENST00000414419 GINS4Q9BRT9 223 aa8.84□□□□□ -0.99
RFFL-204ENST00000414419 AGMATQ9BSE5 352 aa8.84□□□□□ -0.99
RFFL-204ENST00000414419 PARP12Q9H0J9 701 aaKnown RBP8.84□□□□□ -0.99
RFFL-204ENST00000414419 ZNF230Q9UIE0 474 aaPredicted RBP8.84□□□□□ -0.99
RFFL-204ENST00000414419 WASHC3Q9Y3C0 194 aa8.84□□□□□ -0.99
RFFL-204ENST00000414419 RBBP9O75884 186 aa8.83□□□□□ -1
RFFL-204ENST00000414419 CT45A6P0DMU7 189 aa8.83□□□□□ -1
RFFL-204ENST00000414419 CT45A5P0DMU8 189 aa8.83□□□□□ -1
RFFL-204ENST00000414419 CT45A7P0DMV0 189 aa8.83□□□□□ -1
RFFL-204ENST00000414419 OR5H8P0DN80 308 aa8.83□□□□□ -1
RFFL-204ENST00000414419 SNRPBP14678 240 aaKnown RBP8.83□□□□□ -1
RFFL-204ENST00000414419 RPL23AP62750 156 aaKnown RBP8.83□□□□□ -1
RFFL-204ENST00000414419 PITPNAQ00169 270 aa8.83□□□□□ -1
RFFL-204ENST00000414419 PDLIM3Q53GG5 364 aaPredicted RBP8.83□□□□□ -1
RFFL-204ENST00000414419 IGSF11Q5DX21 431 aa8.83□□□□□ -1
RFFL-204ENST00000414419 CXorf66Q5JRM2 361 aaPredicted RBP8.83□□□□□ -1
RFFL-204ENST00000414419 IDNKQ5T6J7 187 aa8.83□□□□□ -1
RFFL-204ENST00000414419 GLDNQ6ZMI3 551 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms