RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 ST3GAL4Q11206 333 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 MLLT11Q13015 90 aaPredicted RBP2□□□□□ -2.09
HMGB1P11-201ENST00000413899 INSL4Q14641 139 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 TRAM2Q15035 370 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 ELOCQ15369 112 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR1Q1Q15612 314 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF791Q3KP31 576 aaPredicted RBP2□□□□□ -2.09
HMGB1P11-201ENST00000413899 MESTQ5EB52 335 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 CLEC12AQ5QGZ9 265 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 LINC01590Q5TEZ4 76 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 C9orf135Q5VTT2 229 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 NXNL2Q5VZ03 156 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 C16orf47Q6ZP98 133 aaPredicted RBP2□□□□□ -2.09
HMGB1P11-201ENST00000413899 LINC00299Q6ZSB3 139 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 SLC16A13Q7RTY0 426 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 GKN2Q86XP6 184 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 CYP4Z2PQ8N1L4 340 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 GTPBP8Q8N3Z3 284 aaPredicted RBP2□□□□□ -2.09
HMGB1P11-201ENST00000413899 TMEM105Q8N8V8 129 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 APCDD1LQ8NCL9 501 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR51Q1Q8NH59 317 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR4C6Q8NH72 309 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 GNPDA2Q8TDQ7 276 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 C17orf50Q8WW18 174 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 TMEM239Q8WW34 195 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 RASSF5Q8WWW0 418 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 RORBQ92753 470 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 HGDQ93099 445 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 SLC35B4Q969S0 331 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 RERGQ96A58 199 aaPredicted RBP2□□□□□ -2.09
HMGB1P11-201ENST00000413899 FLYWCH2Q96CP2 140 aaKnown RBP2□□□□□ -2.09
HMGB1P11-201ENST00000413899 RMI2Q96E14 147 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 PGLYRP3Q96LB9 341 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 Q96MT0 163 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 GPX7Q96SL4 187 aaPredicted RBP2□□□□□ -2.09
HMGB1P11-201ENST00000413899 TIMM17AQ99595 171 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 MGLLQ99685 303 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 ULBP2Q9BZM5 246 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 DCSTAMPQ9H295 470 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 MIXL1Q9H2W2 232 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 TRIM45Q9H8W5 580 aaPredicted RBP2□□□□□ -2.09
HMGB1P11-201ENST00000413899 ANKHQ9HCJ1 492 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 VCX3AQ9NNX9 186 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 CALML5Q9NZT1 146 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 TPRKBQ9Y3C4 175 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 MMACHCQ9Y4U1 282 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 ORC6Q9Y5N6 252 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF780BQ9Y6R6 833 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 S4R3C0 116 aa2□□□□□ -2.09
HMGB1P11-201ENST00000413899 CHD3Q12873 2000 aaKnown RBP2□□□□□ -2.09
HMGB1P11-201ENST00000413899 TRIOO75962 3097 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 IGKV1D-17A0A075B6S4 117 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 A0A087WUJ7 227 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 TRBV11-1A0A0K0K1C0 115 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 A0A1B0GX78 115 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 EFCAB10A6NFE3 127 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF850A8MQ14 1090 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 EFCAB9A8MZ26 197 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 D6RAR5 112 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 FTCDNL1E5RQL4 147 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF670-ZNF695F2Z2N8 137 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 BOLA2-SMG1P6H3BVE0 249 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 SIRPB1O00241 398 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 CCRL2O00421 344 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 KPNA4O00629 521 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 CHST1O43916 411 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 FADS1O60427 444 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 MPZL2O60487 215 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 OR2B3O76000 313 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 RAB36O95755 333 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 IGF2P01344 180 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 IGKV1-17P01599 117 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 IGHMP01871 453 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 GYPBP06028 91 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 ACSM4P0C7M7 580 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 ASAH2BP0C7U1 165 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 CT45A6P0DMU7 189 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 CT45A5P0DMU8 189 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 CT45A7P0DMV0 189 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 IFI30P13284 250 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 SPNP16150 400 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 GSTM3P21266 225 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 CSRP1P21291 193 aaKnown RBP1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 OTX1P32242 354 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 RBM34P42696 430 aaKnown RBP1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 SMIM11AP58511 58 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 CDC42P60953 191 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 RPS11P62280 158 aaKnown RBP eCLIP1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 LSM3P62310 102 aaKnown RBP1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 CACNG7P62955 275 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 PSPHP78330 225 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 CCL7P80098 99 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 FABP5Q01469 135 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF117Q03924 483 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 TPBGQ13641 420 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 GNA13Q14344 377 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 TOMM34Q15785 309 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 MOGQ16653 247 aa1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 ZNF829Q3KNS6 432 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P11-201ENST00000413899 CT45A1Q5HYN5 189 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 231.3 ms