RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 HELZ2Q9BYK8 2649 aaKnown RBP5.46□□□□□ -1.54
VPS41-204ENST00000413141 USF3Q68DE3 2245 aa5.46□□□□□ -1.54
VPS41-204ENST00000413141 LOC105371242A0A075B767 164 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 A0A087X0M5 115 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 SAA2-SAA4A0A096LPE2 208 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 PPIAL4CA0A0B4J2A2 164 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 C3orf85A0A1B0GTC6 90 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 A0A1B0GX30 115 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 H0Y980 276 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 CCSO14618 274 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 SLC22A5O76082 557 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 IGHV3-7P01780 117 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 LIPFP07098 398 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 HNRNPCP07910 306 aaKnown RBP eCLIP5.45□□□□□ -1.54
VPS41-204ENST00000413141 SAA2P0DJI9 122 aaPredicted RBP5.45□□□□□ -1.54
VPS41-204ENST00000413141 PPIAL4GP0DN37 164 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 IGHV1-8P0DP01 117 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 F2RP25116 425 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 GPR12P47775 334 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 GNG10P50151 68 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 H2BFSP57053 126 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 ERVFRD-1P60508 538 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 LMO4P61968 165 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 SRPXP78539 464 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 TMEM187Q14656 261 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 SP6Q3SY56 376 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 CT45A1Q5HYN5 189 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 DCAF12L2Q5VW00 463 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 HIST2H2BCQ6DN03 193 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 LIAT1Q6ZQX7 453 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 SLC25A48Q6ZT89 311 aaKnown RBP5.45□□□□□ -1.54
VPS41-204ENST00000413141 KCTD9Q7L273 389 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 C11orf42Q8N5U0 333 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 LRTM2Q8N967 370 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 UXS1Q8NBZ7 420 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 ZBTB34Q8NCN2 500 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 OR51H1Q8NH63 302 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 CT45A3Q8NHU0 189 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 MSI2Q96DH6 328 aaKnown RBP5.45□□□□□ -1.54
VPS41-204ENST00000413141 ABHD14BQ96IU4 210 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 DMRTB1Q96MA1 342 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 TMEM222Q9H0R3 208 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 LIN7CQ9NUP9 197 aaKnown RBP5.45□□□□□ -1.54
VPS41-204ENST00000413141 BEX4Q9NWD9 120 aaPredicted RBP5.45□□□□□ -1.54
VPS41-204ENST00000413141 SDHAF2Q9NX18 166 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 ONECUT1Q9UBC0 465 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 RNF150Q9ULK6 438 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 KCNIP3Q9Y2W7 256 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 SESN1Q9Y6P5 492 aa5.45□□□□□ -1.54
VPS41-204ENST00000413141 GCN1Q92616 2671 aaKnown RBP5.44□□□□□ -1.54
VPS41-204ENST00000413141 KIAA2026Q5HYC2 2103 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 IGHV4-30-2A0A087WSY4 118 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 NBPF19A0A087WUL8 3843 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 IGHV4-61A0A0C4DH41 118 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 A0A1W2PPE3 182 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 RNF212BA8MTL3 300 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 M0R1W7 72 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 ENSAO43768 121 aaKnown RBP5.44□□□□□ -1.54
VPS41-204ENST00000413141 ADAP1O75689 374 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 B3GALNT1O75752 331 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 OR2A4O95047 310 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 SIX6O95475 246 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 GIPP09681 153 aaPredicted RBP5.44□□□□□ -1.54
VPS41-204ENST00000413141 HLA-GP17693 338 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 UCP1P25874 307 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 ZFP36P26651 326 aaKnown RBP5.44□□□□□ -1.54
VPS41-204ENST00000413141 DSCR9P59020 149 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 PAX2Q02962 417 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 CATR1Q13166 79 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 DEFB113Q30KQ7 82 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 RPL39P5Q59GN2 51 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 BTNL3Q6UXE8 466 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 ODF3L1Q8IXM7 274 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 LGI3Q8N145 548 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 LINC00311Q8N616 119 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 KIR3DL3Q8N743 410 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 C8orf31Q8N9H6 132 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.44□□□□□ -1.54
VPS41-204ENST00000413141 LHFPL5Q8TAF8 219 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 ZNF596Q8TC21 504 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 GLYATL2Q8WU03 294 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 ASB13Q8WXK3 278 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 C18orf12Q96KH6 178 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 TMEM56Q96MV1 263 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 OR2A7Q96R45 310 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 HSD17B10Q99714 261 aaKnown RBP5.44□□□□□ -1.54
VPS41-204ENST00000413141 CHIAQ9BZP6 476 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 TMEM133Q9H2Q1 129 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 RAB18Q9NP72 206 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 PIPOXQ9P0Z9 390 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 ZNRD1Q9P1U0 126 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 TMEM56-RWDD3S4R434 201 aa5.44□□□□□ -1.54
VPS41-204ENST00000413141 IGHV2-26A0A0B4J1V2 119 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 IGHV2-70DA0A0C4DH43 119 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 hCG_1809904A0A1W2PP81 198 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 A0A1W2PPE2 198 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 DUXBA0A1W2PPF3 345 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 A0A1W2PR64 198 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 A0A1W2PRV1 198 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 LINC00473A8K010 186 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms