RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 SOCS1O15524 211 aa17.42■□□□□ 0.38
MSH6-202ENST00000411819 RGS10O43665 173 aa17.42■□□□□ 0.38
MSH6-202ENST00000411819 ARSBP15848 533 aa17.42■□□□□ 0.38
MSH6-202ENST00000411819 LIN54Q6MZP7 749 aa17.42■□□□□ 0.38
MSH6-202ENST00000411819 ZNF880Q6PDB4 577 aa17.42■□□□□ 0.38
MSH6-202ENST00000411819 OR11H1Q8NG94 326 aa17.42■□□□□ 0.38
MSH6-202ENST00000411819 CHCHD6Q9BRQ6 235 aa17.42■□□□□ 0.38
MSH6-202ENST00000411819 PARP12Q9H0J9 701 aaKnown RBP17.42■□□□□ 0.38
MSH6-202ENST00000411819 AK3Q9UIJ7 227 aa17.42■□□□□ 0.38
MSH6-202ENST00000411819 AK6Q9Y3D8 172 aaKnown RBP17.42■□□□□ 0.38
MSH6-202ENST00000411819 TRAV41A0A0B4J266 112 aa17.41■□□□□ 0.38
MSH6-202ENST00000411819 SEC14L6B5MCN3 397 aa17.41■□□□□ 0.38
MSH6-202ENST00000411819 SLC17A2O00624 439 aa17.41■□□□□ 0.38
MSH6-202ENST00000411819 RAMP3O60896 148 aa17.41■□□□□ 0.38
MSH6-202ENST00000411819 ARL6IP5O75915 188 aa17.41■□□□□ 0.38
MSH6-202ENST00000411819 PPIFP30405 207 aaKnown RBP17.41■□□□□ 0.38
MSH6-202ENST00000411819 HLA-DRB3P79483 266 aa17.41■□□□□ 0.38
MSH6-202ENST00000411819 PLGLAQ15195 96 aa17.41■□□□□ 0.38
MSH6-202ENST00000411819 ECSCRQ19T08 205 aa17.41■□□□□ 0.38
MSH6-202ENST00000411819 GLDNQ6ZMI3 551 aaPredicted RBP17.41■□□□□ 0.38
MSH6-202ENST00000411819 NRG4Q8WWG1 115 aa17.41■□□□□ 0.38
MSH6-202ENST00000411819 ABHD14BQ96IU4 210 aa17.41■□□□□ 0.38
MSH6-202ENST00000411819 OR5B12Q96R08 314 aa17.41■□□□□ 0.38
MSH6-202ENST00000411819 GFI1Q99684 422 aa17.41■□□□□ 0.38
MSH6-202ENST00000411819 B9D2Q9BPU9 175 aa17.41■□□□□ 0.38
MSH6-202ENST00000411819 KLK15Q9H2R5 256 aa17.41■□□□□ 0.38
MSH6-202ENST00000411819 RIMS4Q9H426 269 aaPredicted RBP17.41■□□□□ 0.38
MSH6-202ENST00000411819 DNAH9Q9NYC9 4486 aa17.41■□□□□ 0.38
MSH6-202ENST00000411819 HSPA12AO43301 675 aa17.4■□□□□ 0.38
MSH6-202ENST00000411819 NDUFA3O95167 84 aa17.4■□□□□ 0.38
MSH6-202ENST00000411819 FHL3Q13643 280 aa17.4■□□□□ 0.38
MSH6-202ENST00000411819 TRAM1Q15629 374 aa17.4■□□□□ 0.38
MSH6-202ENST00000411819 RAB11BQ15907 218 aa17.4■□□□□ 0.38
MSH6-202ENST00000411819 TMEM91Q6ZNR0 172 aa17.4■□□□□ 0.38
MSH6-202ENST00000411819 NPBQ8NG41 125 aa17.4■□□□□ 0.38
MSH6-202ENST00000411819 FBXL15Q9H469 300 aa17.4■□□□□ 0.38
MSH6-202ENST00000411819 GNB4Q9HAV0 340 aa17.4■□□□□ 0.38
MSH6-202ENST00000411819 OR1A1Q9P1Q5 309 aa17.4■□□□□ 0.38
MSH6-202ENST00000411819 OR5H14A6NHG9 310 aa17.39■□□□□ 0.37
MSH6-202ENST00000411819 H7C2Y5 167 aa17.39■□□□□ 0.37
MSH6-202ENST00000411819 CD37P11049 281 aa17.39■□□□□ 0.37
MSH6-202ENST00000411819 PSMA1P25786 263 aaKnown RBP17.39■□□□□ 0.37
MSH6-202ENST00000411819 CALRP27797 417 aaKnown RBP17.39■□□□□ 0.37
MSH6-202ENST00000411819 CLDN12P56749 244 aa17.39■□□□□ 0.37
MSH6-202ENST00000411819 TPBGQ13641 420 aa17.39■□□□□ 0.37
MSH6-202ENST00000411819 MYOZ3Q8TDC0 251 aa17.39■□□□□ 0.37
MSH6-202ENST00000411819 ABHD5Q8WTS1 349 aa17.39■□□□□ 0.37
MSH6-202ENST00000411819 UBE2E2Q96LR5 201 aa17.39■□□□□ 0.37
MSH6-202ENST00000411819 DUSP21Q9H596 190 aa17.39■□□□□ 0.37
MSH6-202ENST00000411819 C12orf4Q9NQ89 552 aa17.39■□□□□ 0.37
MSH6-202ENST00000411819 MGAT4AQ9UM21 535 aa17.39■□□□□ 0.37
MSH6-202ENST00000411819 VSIG4Q9Y279 399 aa17.39■□□□□ 0.37
MSH6-202ENST00000411819 TRBV6-6A0A0A6YYG2 114 aa17.38■□□□□ 0.37
MSH6-202ENST00000411819 GSTP1P09211 210 aaKnown RBP17.38■□□□□ 0.37
MSH6-202ENST00000411819 CT45A6P0DMU7 189 aa17.38■□□□□ 0.37
MSH6-202ENST00000411819 CT45A5P0DMU8 189 aa17.38■□□□□ 0.37
MSH6-202ENST00000411819 CT45A7P0DMV0 189 aa17.38■□□□□ 0.37
MSH6-202ENST00000411819 ZBTB25P24278 435 aa17.38■□□□□ 0.37
MSH6-202ENST00000411819 ECI1P42126 302 aa17.38■□□□□ 0.37
MSH6-202ENST00000411819 VEGFCP49767 419 aa17.38■□□□□ 0.37
MSH6-202ENST00000411819 NDPQ00604 133 aa17.38■□□□□ 0.37
MSH6-202ENST00000411819 MLLT11Q13015 90 aaPredicted RBP17.38■□□□□ 0.37
MSH6-202ENST00000411819 ZNF260Q3ZCT1 412 aa17.38■□□□□ 0.37
MSH6-202ENST00000411819 ZNF491Q8N8L2 437 aa17.38■□□□□ 0.37
MSH6-202ENST00000411819 EDARADDQ8WWZ3 215 aa17.38■□□□□ 0.37
MSH6-202ENST00000411819 PRR25Q96S07 402 aa17.38■□□□□ 0.37
MSH6-202ENST00000411819 ISYNA1Q9NPH2 558 aa17.38■□□□□ 0.37
MSH6-202ENST00000411819 WASHC3Q9Y3C0 194 aa17.38■□□□□ 0.37
MSH6-202ENST00000411819 A3GALT2U3KPV4 340 aa17.38■□□□□ 0.37
MSH6-202ENST00000411819 A0A1W2PN81 502 aa17.37■□□□□ 0.37
MSH6-202ENST00000411819 H0YJW9 148 aa17.37■□□□□ 0.37
MSH6-202ENST00000411819 RRHO14718 337 aa17.37■□□□□ 0.37
MSH6-202ENST00000411819 IGLV1-40P01703 118 aa17.37■□□□□ 0.37
MSH6-202ENST00000411819 OR8U8P0C7N1 319 aa17.37■□□□□ 0.37
MSH6-202ENST00000411819 CHRNA7P36544 502 aa17.37■□□□□ 0.37
MSH6-202ENST00000411819 CEACAM6P40199 344 aa17.37■□□□□ 0.37
MSH6-202ENST00000411819 ZNF616Q08AN1 781 aa17.37■□□□□ 0.37
MSH6-202ENST00000411819 OR1N2Q8NGR9 330 aa17.37■□□□□ 0.37
MSH6-202ENST00000411819 ARHGAP5-AS1Q96IT6 56 aa17.37■□□□□ 0.37
MSH6-202ENST00000411819 CMSS1Q9BQ75 279 aaKnown RBP17.37■□□□□ 0.37
MSH6-202ENST00000411819 HSF4Q9ULV5 492 aa17.37■□□□□ 0.37
MSH6-202ENST00000411819 FBXO7Q9Y3I1 522 aa17.37■□□□□ 0.37
MSH6-202ENST00000411819 I3L521 148 aa17.36■□□□□ 0.37
MSH6-202ENST00000411819 SCTP09683 121 aa17.36■□□□□ 0.37
MSH6-202ENST00000411819 CPEP16870 476 aa17.36■□□□□ 0.37
MSH6-202ENST00000411819 MC5RP33032 325 aa17.36■□□□□ 0.37
MSH6-202ENST00000411819 MAP2K4P45985 399 aa17.36■□□□□ 0.37
MSH6-202ENST00000411819 RAB9AP51151 201 aa17.36■□□□□ 0.37
MSH6-202ENST00000411819 GNB1P62873 340 aa17.36■□□□□ 0.37
MSH6-202ENST00000411819 FAM89BQ8N5H3 189 aa17.36■□□□□ 0.37
MSH6-202ENST00000411819 MGLLQ99685 303 aa17.36■□□□□ 0.37
MSH6-202ENST00000411819 AGMATQ9BSE5 352 aa17.36■□□□□ 0.37
MSH6-202ENST00000411819 PECRQ9BY49 303 aa17.36■□□□□ 0.37
MSH6-202ENST00000411819 C11orf54Q9H0W9 315 aaPredicted RBP17.36■□□□□ 0.37
MSH6-202ENST00000411819 Q9N2K0 584 aa17.36■□□□□ 0.37
MSH6-202ENST00000411819 FOXI3A8MTJ6 420 aaPredicted RBP17.35■□□□□ 0.37
MSH6-202ENST00000411819 ITGB1BP1O14713 200 aa17.35■□□□□ 0.37
MSH6-202ENST00000411819 RBBP9O75884 186 aa17.35■□□□□ 0.37
MSH6-202ENST00000411819 CRHBPP24387 322 aa17.35■□□□□ 0.37
MSH6-202ENST00000411819 CX3CL1P78423 397 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms