RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 MTIF3Q9H2K0 278 aaKnown RBP-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR51I1Q9H343 314 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 COPS7BQ9H9Q2 264 aaPredicted RBP-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 ELOVL3Q9HB03 270 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 AS3MTQ9HBK9 375 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 NRN1Q9NPD7 142 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 ACOXLQ9NUZ1 547 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 CLN6Q9NWW5 311 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 AAR2Q9Y312 384 aaKnown RBP-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 TMED5Q9Y3A6 229 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 SYNJ2O15056 1496 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 HECW2Q9P2P5 1572 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 UBR1Q8IWV7 1749 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 NRXN3Q9Y4C0 1643 aa-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 BLMP54132 1417 aaPredicted RBP-2.42□□□□□ -2.8
RNU4-88P-201ENST00000411220 RREB1Q92766 1687 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 IGHV6-1A0A0B4J1U7 121 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 TRAV39A0A0B4J263 110 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 FAM237AA0A1B0GTK4 181 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 LOC101927531A0A1B0GV80 90 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 C17orf105B2RV13 164 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 KBTBD13C9JR72 458 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 LRRN3E7EW58 273 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 F8VRH5 84 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 PLPP1O14494 284 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 TOR1AO14656 332 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 RDH16O75452 317 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 LGALS1P09382 135 aaKnown RBP-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR5AL1P0C617 328 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 PBLDP30039 288 aaPredicted RBP-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 RFC4P35249 363 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 HRH1P35367 487 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 TALDO1P37837 337 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 MSH2P43246 934 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 GRK6P43250 576 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 PSMD7P51665 324 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 CDH13P55290 713 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 GEMIN4P57678 1058 aaKnown RBP-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 TAS2R45P59539 299 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 ACTR1AP61163 376 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 EMX2Q04743 252 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 ECH1Q13011 328 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 PDIA2Q13087 525 aaKnown RBP-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 PICALMQ13492 652 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 GNL2Q13823 731 aaKnown RBP-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 MAPRE2Q15555 327 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 USF2Q15853 346 aaPredicted RBP-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 KCTD21Q4G0X4 260 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR10J3Q5JRS4 329 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 C1orf228Q6PIY5 440 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 ENPP6Q6UWR7 440 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 Q6ZQT0 140 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 Q6ZRG5 221 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 PEX26Q7Z412 305 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 CATIPQ7Z7H3 387 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 IFNEQ86WN2 208 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 CCDC28AQ8IWP9 274 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 CD302Q8IX05 232 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 DEFB106AQ8N104 65 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 FER1L6-AS1Q8NA97 138 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 NHLRC2Q8NBF2 726 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR56B4Q8NH76 319 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 UCMAQ8WVF2 138 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 UBE2Q2Q8WVN8 375 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 HMGB4Q8WW32 186 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 ELMO1Q92556 727 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 CNOT9Q92600 299 aaKnown RBP-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 MAL2Q969L2 176 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 C3orf49Q96BT1 292 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 TBC1D31Q96DN5 1066 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 HOOK2Q96ED9 719 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 GINS4Q9BRT9 223 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 H2AFJQ9BTM1 129 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 TMEM243Q9BU79 118 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 ISCA1Q9BUE6 129 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR2J1Q9GZK6 312 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 RNASE7Q9H1E1 156 aaKnown RBP-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR51I2Q9H344 312 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 PRMT8Q9NR22 394 aaPredicted RBP-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 KCNIP2Q9NS61 270 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 SCN3BQ9NY72 215 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 CALYQ9NYX4 217 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 KCNIP1Q9NZI2 227 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 BFARQ9NZS9 450 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 CWC15Q9P013 229 aaKnown RBP-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 CDKN2A-AS1Q9UH64 79 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 TRMT112Q9UI30 125 aaKnown RBP-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 EPDR1Q9UM22 224 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 POFUT2Q9Y2G5 429 aa-2.43□□□□□ -2.8
RNU4-88P-201ENST00000411220 CAMTA1Q9Y6Y1 1673 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 MAST1Q9Y2H9 1570 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 FGD5Q6ZNL6 1462 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 PHLPP1O60346 1717 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 PKD1L3Q7Z443 1732 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 A0A0J9YVX5 310 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 TRBV10-2A0A0K0K1G8 114 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 TEX50A0A1B0GTY4 177 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 MAGEB16A2A368 324 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 ANKDD1BA6NHY2 528 aa-2.44□□□□□ -2.8
RNU4-88P-201ENST00000411220 E5RGE8 158 aa-2.44□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms