RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 OR3A1P47881 315 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 BRWD1-AS2P59051 145 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 RPL30P62888 115 aaKnown RBP13.34□□□□□ -0.27
HOXD3-202ENST00000410016 HBG1P69891 147 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 HBG2P69892 147 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 SERF2P84101 59 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 ELOBQ15370 118 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 ACSF3Q4G176 576 aaPredicted RBP13.34□□□□□ -0.27
HOXD3-202ENST00000410016 SPANXN5Q5MJ07 72 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 ZNF645Q8N7E2 425 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 GALMQ96C23 342 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 NIPSNAP3BQ9BS92 247 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 WDR61Q9GZS3 305 aaKnown RBP13.34□□□□□ -0.27
HOXD3-202ENST00000410016 GNG13Q9P2W3 67 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 RNF150Q9ULK6 438 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 TMEM30CPA0ZSE6 113 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 FAM90A2PQ658T7 463 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 Q6ZR03 302 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 CXorf67Q86X51 503 aaPredicted RBP13.34□□□□□ -0.27
HOXD3-202ENST00000410016 RCC1LQ96I51 464 aaKnown RBP13.34□□□□□ -0.27
HOXD3-202ENST00000410016 PARD6GQ9BYG4 376 aaPredicted RBP13.34□□□□□ -0.27
HOXD3-202ENST00000410016 BCL2L14Q9BZR8 327 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 TOLLIPQ9H0E2 274 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 ZNF665Q9H7R5 613 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 OBP2BQ9NPH6 170 aa13.34□□□□□ -0.27
HOXD3-202ENST00000410016 CISD1Q9NZ45 108 aaKnown RBP13.34□□□□□ -0.27
HOXD3-202ENST00000410016 SMIM6P0DI80 62 aa13.33□□□□□ -0.28
HOXD3-202ENST00000410016 NQO2P16083 231 aa13.33□□□□□ -0.28
HOXD3-202ENST00000410016 TNFRSF9Q07011 255 aa13.33□□□□□ -0.28
HOXD3-202ENST00000410016 SLC35E4Q6ICL7 350 aa13.33□□□□□ -0.28
HOXD3-202ENST00000410016 ZNF343Q6P1L6 599 aa13.33□□□□□ -0.28
HOXD3-202ENST00000410016 TMEM14EPQ6UXP3 125 aa13.33□□□□□ -0.28
HOXD3-202ENST00000410016 WDR31Q8NA23 367 aa13.33□□□□□ -0.28
HOXD3-202ENST00000410016 ZBTB34Q8NCN2 500 aa13.33□□□□□ -0.28
HOXD3-202ENST00000410016 KCNIP1Q9NZI2 227 aa13.33□□□□□ -0.28
HOXD3-202ENST00000410016 RNF212BA8MTL3 300 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 AP4M1O00189 453 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 IFNA17P01571 189 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 BCL2P10415 239 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 ERVFRD-1P60508 538 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 AESQ08117 197 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 ZNF787Q6DD87 383 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 LCN15Q6UWW0 184 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 OR52L2PQ8NGH6 319 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 Q8WTZ3 238 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 COQ2Q96H96 371 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 TRIB1Q96RU8 372 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 HSPB7Q9UBY9 170 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 CFAP47Q6ZTR5 3102 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 CXorf65A6NEN9 183 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 CXCL1P09341 107 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 KIR2DL2P43627 348 aaPredicted RBP13.32□□□□□ -0.28
HOXD3-202ENST00000410016 GLIPR1P48060 266 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 SLC16A13Q7RTY0 426 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 CA5BP1Q8WTZ4 195 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 OR2D2Q9H210 308 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 RBKSQ9H477 322 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 CACNA1DQ01668 2161 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 ZFHX4Q86UP3 3567 aa13.32□□□□□ -0.28
HOXD3-202ENST00000410016 OOEPA6NGQ2 149 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 ZFP92A6NM28 416 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 AGFG2O95081 481 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 KRASP01116 189 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 HBZP02008 142 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 ZNF806P0C7X5 589 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 FGF8P55075 233 aaPredicted RBP13.31□□□□□ -0.28
HOXD3-202ENST00000410016 ACP7Q6ZNF0 438 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 NANPQ8TBE9 248 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 TAF15Q92804 592 aaKnown RBP eCLIP13.31□□□□□ -0.28
HOXD3-202ENST00000410016 SIRT7Q9NRC8 400 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 PRR14LQ5THK1 2151 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 NKX2-8O15522 239 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 TFF1P04155 84 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 COX5AP20674 150 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 G6PCP35575 357 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 RPS10P46783 165 aaKnown RBP13.31□□□□□ -0.28
HOXD3-202ENST00000410016 RAB11AP62491 216 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 WDR82Q6UXN9 313 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 CENPVQ7Z7K6 275 aaPredicted RBP13.31□□□□□ -0.28
HOXD3-202ENST00000410016 PRR7Q8TB68 274 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 USF3Q68DE3 2245 aa13.31□□□□□ -0.28
HOXD3-202ENST00000410016 DSPP15924 2871 aaKnown RBP13.31□□□□□ -0.28
HOXD3-202ENST00000410016 IL2RGP31785 369 aa13.3□□□□□ -0.28
HOXD3-202ENST00000410016 SLC38A11Q08AI6 406 aa13.3□□□□□ -0.28
HOXD3-202ENST00000410016 SRSF6Q13247 344 aaKnown RBP13.3□□□□□ -0.28
HOXD3-202ENST00000410016 TMEM41BQ5BJD5 291 aa13.3□□□□□ -0.28
HOXD3-202ENST00000410016 VWA1Q6PCB0 445 aa13.3□□□□□ -0.28
HOXD3-202ENST00000410016 CNEP1R1Q8N9A8 125 aa13.3□□□□□ -0.28
HOXD3-202ENST00000410016 FDCSPQ8NFU4 85 aa13.3□□□□□ -0.28
HOXD3-202ENST00000410016 LRRC30A6NM36 301 aa13.3□□□□□ -0.28
HOXD3-202ENST00000410016 IGKV1D-33P01593 117 aa13.3□□□□□ -0.28
HOXD3-202ENST00000410016 IGKV1-33P01594 117 aa13.3□□□□□ -0.28
HOXD3-202ENST00000410016 CD55P08174 381 aa13.3□□□□□ -0.28
HOXD3-202ENST00000410016 ZNF124Q15973 351 aa13.3□□□□□ -0.28
HOXD3-202ENST00000410016 RPP25LQ8N5L8 163 aaKnown RBP13.3□□□□□ -0.28
HOXD3-202ENST00000410016 PINX1Q96BK5 328 aaKnown RBP13.3□□□□□ -0.28
HOXD3-202ENST00000410016 CXXC4Q9H2H0 198 aa13.3□□□□□ -0.28
HOXD3-202ENST00000410016 URGCP-MRPS24S4R325 110 aa13.3□□□□□ -0.28
HOXD3-202ENST00000410016 ODAMA1E959 279 aa13.29□□□□□ -0.28
HOXD3-202ENST00000410016 PMS2P5A8MQ11 134 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms