RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 OR3A3P47888 321 aa16.51■□□□□ 0.23
VSX1-204ENST00000409958 LSAMPQ13449 338 aa16.51■□□□□ 0.23
VSX1-204ENST00000409958 ZNF260Q3ZCT1 412 aa16.51■□□□□ 0.23
VSX1-204ENST00000409958 C5orf56Q8N8D9 126 aa16.51■□□□□ 0.23
VSX1-204ENST00000409958 PHF21AQ96BD5 680 aa16.51■□□□□ 0.23
VSX1-204ENST00000409958 AGMATQ9BSE5 352 aa16.51■□□□□ 0.23
VSX1-204ENST00000409958 CABLES2Q9BTV7 478 aa16.51■□□□□ 0.23
VSX1-204ENST00000409958 MRPS26Q9BYN8 205 aaKnown RBP16.51■□□□□ 0.23
VSX1-204ENST00000409958 TOLLIPQ9H0E2 274 aa16.51■□□□□ 0.23
VSX1-204ENST00000409958 C11orf54Q9H0W9 315 aaPredicted RBP16.51■□□□□ 0.23
VSX1-204ENST00000409958 ZNF230Q9UIE0 474 aaPredicted RBP16.51■□□□□ 0.23
VSX1-204ENST00000409958 WNK1Q9H4A3 2382 aa16.5■□□□□ 0.23
VSX1-204ENST00000409958 A0A0A6YYH2 397 aa16.5■□□□□ 0.23
VSX1-204ENST00000409958 A6NJ64 397 aa16.5■□□□□ 0.23
VSX1-204ENST00000409958 SH2D7A6NKC9 451 aaPredicted RBP16.5■□□□□ 0.23
VSX1-204ENST00000409958 GSTT2P0CG29 244 aa16.5■□□□□ 0.23
VSX1-204ENST00000409958 GSTT2BP0CG30 244 aa16.5■□□□□ 0.23
VSX1-204ENST00000409958 PITPNAQ00169 270 aa16.5■□□□□ 0.23
VSX1-204ENST00000409958 PNLIPRP3Q17RR3 467 aa16.5■□□□□ 0.23
VSX1-204ENST00000409958 TMEM95Q3KNT9 176 aa16.5■□□□□ 0.23
VSX1-204ENST00000409958 WIPF2Q8TF74 440 aaPredicted RBP16.5■□□□□ 0.23
VSX1-204ENST00000409958 S1PR3Q99500 378 aa16.5■□□□□ 0.23
VSX1-204ENST00000409958 NABP2Q9BQ15 211 aa16.5■□□□□ 0.23
VSX1-204ENST00000409958 ZNF251Q9BRH9 671 aa16.5■□□□□ 0.23
VSX1-204ENST00000409958 MRPL20Q9BYC9 149 aaKnown RBP16.5■□□□□ 0.23
VSX1-204ENST00000409958 TMEM235A6NFC5 223 aa16.49■□□□□ 0.23
VSX1-204ENST00000409958 M0QZ24 198 aa16.49■□□□□ 0.23
VSX1-204ENST00000409958 NCS1P62166 190 aa16.49■□□□□ 0.23
VSX1-204ENST00000409958 IGSF11Q5DX21 431 aa16.49■□□□□ 0.23
VSX1-204ENST00000409958 C9orf152Q5JTZ5 239 aa16.49■□□□□ 0.23
VSX1-204ENST00000409958 OR8H1Q8NGG4 311 aa16.49■□□□□ 0.23
VSX1-204ENST00000409958 MAFIPQ8WZ33 124 aa16.49■□□□□ 0.23
VSX1-204ENST00000409958 DCSTAMPQ9H295 470 aa16.49■□□□□ 0.23
VSX1-204ENST00000409958 RDH8Q9NYR8 311 aa16.49■□□□□ 0.23
VSX1-204ENST00000409958 NBEAL1Q6ZS30 2694 aa16.49■□□□□ 0.23
VSX1-204ENST00000409958 TRBV6-7A0A0A0MS04 114 aa16.48■□□□□ 0.23
VSX1-204ENST00000409958 NCBP2LA6PVI3 153 aaKnown RBP16.48■□□□□ 0.23
VSX1-204ENST00000409958 GNG2P59768 71 aa16.48■□□□□ 0.23
VSX1-204ENST00000409958 VBP1P61758 197 aa16.48■□□□□ 0.23
VSX1-204ENST00000409958 ANKRD13BQ86YJ7 626 aa16.48■□□□□ 0.23
VSX1-204ENST00000409958 OR10J5Q8NHC4 309 aa16.48■□□□□ 0.23
VSX1-204ENST00000409958 SLC25A46Q96AG3 418 aa16.48■□□□□ 0.23
VSX1-204ENST00000409958 ABHD14BQ96IU4 210 aa16.48■□□□□ 0.23
VSX1-204ENST00000409958 PLSCR3Q9NRY6 295 aa16.48■□□□□ 0.23
VSX1-204ENST00000409958 PKD1L1Q8TDX9 2849 aa16.48■□□□□ 0.23
VSX1-204ENST00000409958 BET1O15155 118 aa16.47■□□□□ 0.23
VSX1-204ENST00000409958 FBXO24O75426 580 aa16.47■□□□□ 0.23
VSX1-204ENST00000409958 RPL39P5Q59GN2 51 aa16.47■□□□□ 0.23
VSX1-204ENST00000409958 Q8N9W7 124 aa16.47■□□□□ 0.23
VSX1-204ENST00000409958 NUDCD2Q8WVJ2 157 aa16.47■□□□□ 0.23
VSX1-204ENST00000409958 KCTD12Q96CX2 325 aaKnown RBP16.47■□□□□ 0.23
VSX1-204ENST00000409958 ABCG5Q9H222 651 aa16.47■□□□□ 0.23
VSX1-204ENST00000409958 DIABLOQ9NR28 239 aa16.47■□□□□ 0.23
VSX1-204ENST00000409958 TRAV18A0A075B6X5 111 aa16.46■□□□□ 0.23
VSX1-204ENST00000409958 ALDH3B2P48448 385 aa16.46■□□□□ 0.23
VSX1-204ENST00000409958 C11orf44Q8N8P7 122 aa16.46■□□□□ 0.23
VSX1-204ENST00000409958 ST6GALNAC5Q9BVH7 336 aa16.46■□□□□ 0.23
VSX1-204ENST00000409958 LIN7CQ9NUP9 197 aaKnown RBP16.46■□□□□ 0.23
VSX1-204ENST00000409958 ZNF221Q9UK13 617 aa16.46■□□□□ 0.23
VSX1-204ENST00000409958 TET2Q6N021 2002 aaPredicted RBP16.46■□□□□ 0.23
VSX1-204ENST00000409958 IGKV1D-8A0A087WSZ0 117 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 SSX5O60225 188 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 GABARAPO95166 117 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 TFAP2AP05549 437 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 CT45A6P0DMU7 189 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 CT45A5P0DMU8 189 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 CT45A7P0DMV0 189 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 C2orf68Q2NKX9 166 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 TREML4Q6UXN2 200 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 CENPVQ7Z7K6 275 aaPredicted RBP16.45■□□□□ 0.22
VSX1-204ENST00000409958 RNF150Q9ULK6 438 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 IGHG2P01859 326 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 CD28P10747 220 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 GPR12P47775 334 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 F2RL1P55085 397 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 CTF1Q16619 201 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 UBE2NLQ5JXB2 153 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 HIST2H2BDQ6DRA6 164 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 FAM71E2Q8N5Q1 922 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.45■□□□□ 0.22
VSX1-204ENST00000409958 OR5AU1Q8NGC0 362 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 RBMXL1Q96E39 390 aaKnown RBP16.45■□□□□ 0.22
VSX1-204ENST00000409958 S100A16Q96FQ6 103 aaKnown RBP16.45■□□□□ 0.22
VSX1-204ENST00000409958 GINS4Q9BRT9 223 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 NAA50Q9GZZ1 169 aaKnown RBP16.45■□□□□ 0.22
VSX1-204ENST00000409958 AUNIPQ9H7T9 357 aa16.45■□□□□ 0.22
VSX1-204ENST00000409958 OR5H14A6NHG9 310 aa16.44■□□□□ 0.22
VSX1-204ENST00000409958 XRCC3O43542 346 aa16.44■□□□□ 0.22
VSX1-204ENST00000409958 PROP1O75360 226 aa16.44■□□□□ 0.22
VSX1-204ENST00000409958 CTXN2P0C2S0 81 aa16.44■□□□□ 0.22
VSX1-204ENST00000409958 MC5RP33032 325 aa16.44■□□□□ 0.22
VSX1-204ENST00000409958 ACTBP60709 375 aa16.44■□□□□ 0.22
VSX1-204ENST00000409958 GPR107Q5VW38 600 aa16.44■□□□□ 0.22
VSX1-204ENST00000409958 FAM131AQ6UXB0 335 aa16.44■□□□□ 0.22
VSX1-204ENST00000409958 GPR141Q7Z602 305 aa16.44■□□□□ 0.22
VSX1-204ENST00000409958 SLC35E3Q7Z769 313 aa16.44■□□□□ 0.22
VSX1-204ENST00000409958 H1FOOQ8IZA3 346 aaPredicted RBP16.44■□□□□ 0.22
VSX1-204ENST00000409958 SAMD12Q8N8I0 201 aa16.44■□□□□ 0.22
VSX1-204ENST00000409958 RASL11BQ9BPW5 248 aa16.44■□□□□ 0.22
VSX1-204ENST00000409958 GAB2Q9UQC2 676 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms