RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 A6NNC1 897 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 MPPED1O15442 326 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 SOD3P08294 240 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 SSTR5P35346 364 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 AKR1D1P51857 326 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 GAGE1Q13065 139 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 PHLDA2Q53GA4 152 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 LAMTOR1Q6IAA8 161 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 C9orf62Q8N4C0 152 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 SECTM1Q8WVN6 248 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 IL1F10Q8WWZ1 152 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 CCL17Q92583 94 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 TNFRSF14Q92956 283 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 MSI2Q96DH6 328 aaKnown RBP4.58□□□□□ -1.68
EPHA4-202ENST00000409854 AKR1E2Q96JD6 320 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 GSX1Q9H4S2 264 aaPredicted RBP4.58□□□□□ -1.68
EPHA4-202ENST00000409854 CCL28Q9NRJ3 127 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 JPT1Q9UK76 154 aa4.58□□□□□ -1.68
EPHA4-202ENST00000409854 ANKHD1Q8IWZ3 2542 aaKnown RBP4.57□□□□□ -1.68
EPHA4-202ENST00000409854 TEX13DA0A0J9YY54 714 aaPredicted RBP4.57□□□□□ -1.68
EPHA4-202ENST00000409854 IFNA7P01567 189 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 OR5AC1P0C628 307 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 DNASE1P24855 282 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 IL2RGP31785 369 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 GPX4P36969 197 aaPredicted RBP4.57□□□□□ -1.68
EPHA4-202ENST00000409854 CEACAM6P40199 344 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 LUMP51884 338 aaPredicted RBP4.57□□□□□ -1.68
EPHA4-202ENST00000409854 LOXL3P58215 753 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 EIF4EBP1Q13541 118 aaPredicted RBP4.57□□□□□ -1.68
EPHA4-202ENST00000409854 EDDM3AQ14507 147 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 C17orf58Q2M2W7 97 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 TMEM30BQ3MIR4 351 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 Q5BKY6 102 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 DEFB108BQ8NET1 73 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 NEU4Q8WWR8 484 aaPredicted RBP4.57□□□□□ -1.68
EPHA4-202ENST00000409854 C18orf12Q96KH6 178 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 DCTN5Q9BTE1 182 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 CHIAQ9BZP6 476 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 NMES1Q9C002 83 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 PARP12Q9H0J9 701 aaKnown RBP4.57□□□□□ -1.68
EPHA4-202ENST00000409854 TRAV14DV4A0A0A6YYC5 116 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 C3orf85A0A1B0GTC6 90 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 M0QZK8 103 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 CCSO14618 274 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 SPINT2O43291 252 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 RNF224P0DH78 156 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 PAX6P26367 422 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 RPL35P42766 123 aaKnown RBP4.57□□□□□ -1.68
EPHA4-202ENST00000409854 MEF2CQ06413 473 aaPredicted RBP4.57□□□□□ -1.68
EPHA4-202ENST00000409854 IL15RAQ13261 267 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 GNMTQ14749 295 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 HFEQ30201 348 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 LIAT1Q6ZQX7 453 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 TBC1D26Q86UD7 250 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 OR52L2PQ8NGH6 319 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 GLYATL2Q8WU03 294 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 RBPMSQ93062 196 aaKnown RBP4.57□□□□□ -1.68
EPHA4-202ENST00000409854 ARL11Q969Q4 196 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 TMEM56Q96MV1 263 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 TP53RKQ96S44 253 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 VRK1Q99986 396 aaPredicted RBP4.57□□□□□ -1.68
EPHA4-202ENST00000409854 TMEM222Q9H0R3 208 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 RAB1BQ9H0U4 201 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 RAB9BQ9NP90 201 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 CALYQ9NYX4 217 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 PRR13Q9NZ81 148 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 CTSZQ9UBR2 303 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 KCNIP3Q9Y2W7 256 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 UBE2J1Q9Y385 318 aaPredicted RBP4.57□□□□□ -1.68
EPHA4-202ENST00000409854 TMEM56-RWDD3S4R434 201 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 CFAP46Q8IYW2 2715 aa4.57□□□□□ -1.68
EPHA4-202ENST00000409854 KBTBD11-OT1A0A1B0GTJ5 212 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 HMSDA8MTL9 139 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 H0Y980 276 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 HSPA12AO43301 675 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 YPEL1O60688 119 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 PGLYRP1O75594 196 aaPredicted RBP4.56□□□□□ -1.68
EPHA4-202ENST00000409854 COL8A2P25067 703 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 UCP1P25874 307 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 SRPXP78539 464 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 FGL1Q08830 312 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 GSG1LQ6UXU4 331 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 CMTM1Q8IZ96 169 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 ZNF645Q8N7E2 425 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 ZBTB34Q8NCN2 500 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 UBALD1Q8TB05 177 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 IGFBPL1Q8WX77 278 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 C5orf30Q96GV9 206 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 YPEL2Q96QA6 119 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 GAL3ST2Q9H3Q3 398 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 TAS2R3Q9NYW6 316 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 SLC25A10Q9UBX3 287 aaPredicted RBP4.56□□□□□ -1.68
EPHA4-202ENST00000409854 CLN8Q9UBY8 286 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 MLXQ9UH92 298 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 LINC00312Q9Y6C7 94 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 TRGV10A0A0A0MS01 117 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 A0A1W2PN81 502 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 DUXBA0A1W2PPF3 345 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 HSD17B6O14756 317 aa4.56□□□□□ -1.68
EPHA4-202ENST00000409854 TMPRSS2O15393 492 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms