RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ITGB1BP1O14713 200 aa11.5□□□□□ -0.57
CBX3-203ENST00000409747 ST8SIA5O15466 376 aa11.5□□□□□ -0.57
CBX3-203ENST00000409747 CD37P11049 281 aa11.5□□□□□ -0.57
CBX3-203ENST00000409747 ARSBP15848 533 aa11.5□□□□□ -0.57
CBX3-203ENST00000409747 PSMA1P25786 263 aaKnown RBP11.5□□□□□ -0.57
CBX3-203ENST00000409747 MC5RP33032 325 aa11.5□□□□□ -0.57
CBX3-203ENST00000409747 QRFPP83859 136 aa11.5□□□□□ -0.57
CBX3-203ENST00000409747 RUNX1Q01196 453 aa11.5□□□□□ -0.57
CBX3-203ENST00000409747 LIPKQ5VXJ0 399 aa11.5□□□□□ -0.57
CBX3-203ENST00000409747 C5orf24Q7Z6I8 188 aa11.5□□□□□ -0.57
CBX3-203ENST00000409747 RBMXL1Q96E39 390 aaKnown RBP11.5□□□□□ -0.57
CBX3-203ENST00000409747 PLGRKTQ9HBL7 147 aa11.5□□□□□ -0.57
CBX3-203ENST00000409747 WSB1Q9Y6I7 421 aa11.5□□□□□ -0.57
CBX3-203ENST00000409747 DNAH9Q9NYC9 4486 aa11.5□□□□□ -0.57
CBX3-203ENST00000409747 G3V318 75 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 ARL6IP5O75915 188 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 IGLV1-40P01703 118 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 ZBTB25P24278 435 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 CNTFRP26992 372 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 INSL3P51460 131 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 ZNF616Q08AN1 781 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 FAM131AQ6UXB0 335 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 TCTEX1D1Q8N7M0 179 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 ZNF491Q8N8L2 437 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 SLC17A2O00624 439 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 RBBP9O75884 186 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 NHLRC4P0CG21 123 aaPredicted RBP11.49□□□□□ -0.57
CBX3-203ENST00000409747 HLA-DRB3P79483 266 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 IRF3Q14653 427 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 PLGLAQ15195 96 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 ZNF660Q6AZW8 331 aaPredicted RBP11.49□□□□□ -0.57
CBX3-203ENST00000409747 RITA1Q96K30 269 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 LPAR5Q9H1C0 372 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 KCNK15Q9H427 330 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 ISYNA1Q9NPH2 558 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 C12orf4Q9NQ89 552 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 HSF4Q9ULV5 492 aa11.49□□□□□ -0.57
CBX3-203ENST00000409747 I3L521 148 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 RRHO14718 337 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 HSPA12AO43301 675 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 GSTP1P09211 210 aaKnown RBP11.48□□□□□ -0.57
CBX3-203ENST00000409747 HSMCR30P0CW71 290 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 ECI1P42126 302 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 RAB9AP51151 201 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 CRIP2P52943 208 aaPredicted RBP11.48□□□□□ -0.57
CBX3-203ENST00000409747 TPBGQ13641 420 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 RAB11BQ15907 218 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 ZNF260Q3ZCT1 412 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 MINDY2Q8NBR6 621 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 OR1N2Q8NGR9 330 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 TMEM203Q969S6 136 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 WWC2-AS2Q96NR7 200 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 RNF5Q99942 180 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 KLK15Q9H2R5 256 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 GNB4Q9HAV0 340 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 AK3Q9UIJ7 227 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 WASHC3Q9Y3C0 194 aa11.48□□□□□ -0.57
CBX3-203ENST00000409747 A0A0A6YYD4 124 aa11.47□□□□□ -0.57
CBX3-203ENST00000409747 H7C2Y5 167 aa11.47□□□□□ -0.57
CBX3-203ENST00000409747 RGS10O43665 173 aa11.47□□□□□ -0.57
CBX3-203ENST00000409747 CT45A6P0DMU7 189 aa11.47□□□□□ -0.57
CBX3-203ENST00000409747 CT45A5P0DMU8 189 aa11.47□□□□□ -0.57
CBX3-203ENST00000409747 CT45A7P0DMV0 189 aa11.47□□□□□ -0.57
CBX3-203ENST00000409747 TMEM267Q0VDI3 215 aaPredicted RBP11.47□□□□□ -0.57
CBX3-203ENST00000409747 P2RY14Q15391 338 aa11.47□□□□□ -0.57
CBX3-203ENST00000409747 ECSCRQ19T08 205 aa11.47□□□□□ -0.57
CBX3-203ENST00000409747 RPL39P5Q59GN2 51 aa11.47□□□□□ -0.57
CBX3-203ENST00000409747 PYHIN1Q6K0P9 492 aa11.47□□□□□ -0.57
CBX3-203ENST00000409747 FAM89BQ8N5H3 189 aa11.47□□□□□ -0.57
CBX3-203ENST00000409747 RNF150Q9ULK6 438 aa11.47□□□□□ -0.57
CBX3-203ENST00000409747 FOXA2Q9Y261 457 aaPredicted RBP11.47□□□□□ -0.57
CBX3-203ENST00000409747 ZNF256Q9Y2P7 627 aaPredicted RBP11.47□□□□□ -0.57
CBX3-203ENST00000409747 A0A1W2PN81 502 aa11.46□□□□□ -0.57
CBX3-203ENST00000409747 ERICH4A6NGS2 130 aa11.46□□□□□ -0.57
CBX3-203ENST00000409747 H0YJW9 148 aa11.46□□□□□ -0.57
CBX3-203ENST00000409747 SOCS1O15524 211 aa11.46□□□□□ -0.57
CBX3-203ENST00000409747 CHRNA7P36544 502 aa11.46□□□□□ -0.57
CBX3-203ENST00000409747 CEACAM6P40199 344 aa11.46□□□□□ -0.57
CBX3-203ENST00000409747 PSMD7P51665 324 aa11.46□□□□□ -0.57
CBX3-203ENST00000409747 AQP4P55087 323 aa11.46□□□□□ -0.57
CBX3-203ENST00000409747 MLLT11Q13015 90 aaPredicted RBP11.46□□□□□ -0.57
CBX3-203ENST00000409747 KIAA0141Q14154 515 aaPredicted RBP11.46□□□□□ -0.57
CBX3-203ENST00000409747 OR5AN1Q8NGI8 311 aa11.46□□□□□ -0.57
CBX3-203ENST00000409747 ABHD14BQ96IU4 210 aa11.46□□□□□ -0.57
CBX3-203ENST00000409747 PRR25Q96S07 402 aa11.46□□□□□ -0.57
CBX3-203ENST00000409747 AGMATQ9BSE5 352 aa11.46□□□□□ -0.57
CBX3-203ENST00000409747 FBXL15Q9H469 300 aa11.46□□□□□ -0.57
CBX3-203ENST00000409747 DUSP21Q9H596 190 aa11.46□□□□□ -0.57
CBX3-203ENST00000409747 SCOCQ9UIL1 159 aa11.46□□□□□ -0.57
CBX3-203ENST00000409747 LSM4Q9Y4Z0 139 aaKnown RBP11.46□□□□□ -0.57
CBX3-203ENST00000409747 CPEP16870 476 aa11.46□□□□□ -0.58
CBX3-203ENST00000409747 RPS25P62851 125 aaKnown RBP11.46□□□□□ -0.58
CBX3-203ENST00000409747 GNB1P62873 340 aa11.46□□□□□ -0.58
CBX3-203ENST00000409747 TMEM91Q6ZNR0 172 aa11.46□□□□□ -0.58
CBX3-203ENST00000409747 ZNF429Q86V71 674 aa11.46□□□□□ -0.58
CBX3-203ENST00000409747 OR56B1Q8NGI3 324 aa11.46□□□□□ -0.58
CBX3-203ENST00000409747 ABHD5Q8WTS1 349 aa11.46□□□□□ -0.58
CBX3-203ENST00000409747 PTX4Q96A99 478 aa11.46□□□□□ -0.58
CBX3-203ENST00000409747 Q9N2K0 584 aa11.46□□□□□ -0.58
CBX3-203ENST00000409747 OR1A1Q9P1Q5 309 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms