RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 MIOXQ9UGB7 285 aa15.16■□□□□ 0.02
SNED1-204ENST00000401884 SIGLEC12Q96PQ1 595 aa15.16■□□□□ 0.02
SNED1-204ENST00000401884 RNF7Q9UBF6 113 aa15.16■□□□□ 0.02
SNED1-204ENST00000401884 NAT8BQ9UHF3 227 aa15.16■□□□□ 0.02
SNED1-204ENST00000401884 IGHV3OR15-7A0A075B7D8 119 aa15.16■□□□□ 0.02
SNED1-204ENST00000401884 OR4C12Q96R67 309 aa15.16■□□□□ 0.02
SNED1-204ENST00000401884 CHRNB4P30926 498 aa15.16■□□□□ 0.02
SNED1-204ENST00000401884 CEBPDP49716 269 aaPredicted RBP15.16■□□□□ 0.02
SNED1-204ENST00000401884 FER1L5A0AVI2 2057 aa15.16■□□□□ 0.02
SNED1-204ENST00000401884 LOC102723996A0A087X1L8 192 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 H0YIZ8 118 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 H0YL77 283 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 GNG4P50150 75 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 RND3P61587 244 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 AURKAIP1Q9NWT8 199 aaPredicted RBP15.15■□□□□ 0.02
SNED1-204ENST00000401884 WIPI2Q9Y4P8 454 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 CHEK1O14757 476 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 B2MP61769 119 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 HIST1H3AP68431 136 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 DPPA3Q6W0C5 159 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 MYPOPQ86VE0 399 aaPredicted RBP15.15■□□□□ 0.02
SNED1-204ENST00000401884 POM121Q96HA1 1249 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 PRO1933Q9H354 126 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 SHANK1Q9Y566 2161 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 HSBP1O75506 76 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 PMS2P11Q13670 270 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 FAM166AQ6J272 317 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 ZNF71Q9NQZ8 489 aaPredicted RBP15.15■□□□□ 0.02
SNED1-204ENST00000401884 DOK5Q9P104 306 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 CLDN16Q9Y5I7 305 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 A0A1W2PPE3 182 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 KRTDAPP60985 99 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 ATP1A1-AS1Q5TC04 95 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 FAM89BQ8N5H3 189 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 RARRES2Q99969 163 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 LINC00470Q9BZP3 86 aa15.15■□□□□ 0.02
SNED1-204ENST00000401884 HSPB1P04792 205 aaKnown RBP15.14■□□□□ 0.01
SNED1-204ENST00000401884 NPY1RP25929 384 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 CHRDL1Q9BU40 450 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 CLCF1Q9UBD9 225 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 TRAV38-1A0A0B4J264 116 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 K7ESF4 209 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 CLDN14O95500 239 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 CSN1S1P47710 185 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 EIF4E3Q8N5X7 224 aaKnown RBP15.14■□□□□ 0.01
SNED1-204ENST00000401884 HIF1ANQ9NWT6 349 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 FCN1O00602 326 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 MGST3O14880 152 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 EIF3GO75821 320 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNED1-204ENST00000401884 CCL1P22362 96 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 CTSSP25774 331 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 CD82P27701 267 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 FANCMQ8IYD8 2048 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 OR4P4Q8NGL7 312 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 TAF15Q92804 592 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNED1-204ENST00000401884 TMEM230Q96A57 120 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 LYZL4Q96KX0 146 aa15.14■□□□□ 0.01
SNED1-204ENST00000401884 FOXC1Q12948 553 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 OR10G8Q8NGN5 311 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 ZNF703Q9H7S9 590 aaPredicted RBP15.13■□□□□ 0.01
SNED1-204ENST00000401884 TMEM11P17152 192 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 P2RY6Q15077 328 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 MARS2Q96GW9 593 aaKnown RBP15.13■□□□□ 0.01
SNED1-204ENST00000401884 RHOVQ96L33 236 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 COL6A6A6NMZ7 2263 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 A0A0A6YYD4 124 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 CD1BP29016 333 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 TPPP2P59282 170 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 IQCJQ1A5X6 159 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 NSUN5P2Q63ZY6 315 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 KLF14Q8TD94 323 aaPredicted RBP15.13■□□□□ 0.01
SNED1-204ENST00000401884 IL22RA2Q969J5 263 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 MISP3Q96FF7 219 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 REPIN1Q9BWE0 567 aaKnown RBP15.13■□□□□ 0.01
SNED1-204ENST00000401884 FOXJ2Q9P0K8 574 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 PLXND1Q9Y4D7 1925 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 LDLRAD4O15165 306 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 CLN5O75503 358 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 MDKP21741 143 aaPredicted RBP15.13■□□□□ 0.01
SNED1-204ENST00000401884 MS4A10Q96PG2 267 aa15.13■□□□□ 0.01
SNED1-204ENST00000401884 CADP27708 2225 aa15.12■□□□□ 0.01
SNED1-204ENST00000401884 MPV17P39210 176 aa15.12■□□□□ 0.01
SNED1-204ENST00000401884 MEF2BQ02080 365 aaPredicted RBP15.12■□□□□ 0.01
SNED1-204ENST00000401884 PSG5Q15238 335 aa15.12■□□□□ 0.01
SNED1-204ENST00000401884 HFEQ30201 348 aa15.12■□□□□ 0.01
SNED1-204ENST00000401884 ABCA1O95477 2261 aa15.12■□□□□ 0.01
SNED1-204ENST00000401884 HELZP42694 1942 aaKnown RBP15.12■□□□□ 0.01
SNED1-204ENST00000401884 LNP1A1A4G5 178 aa15.12■□□□□ 0.01
SNED1-204ENST00000401884 KIAA1324LA8MWY0 1029 aaPredicted RBP15.12■□□□□ 0.01
SNED1-204ENST00000401884 KLF7O75840 302 aaPredicted RBP15.12■□□□□ 0.01
SNED1-204ENST00000401884 NAT1P18440 290 aa15.12■□□□□ 0.01
SNED1-204ENST00000401884 TMEM45BQ96B21 275 aa15.12■□□□□ 0.01
SNED1-204ENST00000401884 ANAPC16Q96DE5 110 aa15.12■□□□□ 0.01
SNED1-204ENST00000401884 THADAQ6YHU6 1953 aa15.12■□□□□ 0.01
SNED1-204ENST00000401884 ELOA3CA0A087WX78 387 aaPredicted RBP15.12■□□□□ 0.01
SNED1-204ENST00000401884 OR8G5Q8NG78 346 aa15.12■□□□□ 0.01
SNED1-204ENST00000401884 VSTM2AQ8TAG5 236 aa15.12■□□□□ 0.01
SNED1-204ENST00000401884 RPEQ96AT9 228 aa15.12■□□□□ 0.01
SNED1-204ENST00000401884 SAP30LQ9HAJ7 183 aa15.12■□□□□ 0.01
SNED1-204ENST00000401884 MYO7BQ6PIF6 2116 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms