RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 GIMAP1Q8WWP7 306 aa12.88□□□□□ -0.35
HMGA1-204ENST00000401473 MEGF9Q9H1U4 602 aa12.88□□□□□ -0.35
HMGA1-204ENST00000401473 OR2W1Q9Y3N9 320 aa12.88□□□□□ -0.35
HMGA1-204ENST00000401473 MINOS1-NBL1R4GNA1 71 aa12.88□□□□□ -0.35
HMGA1-204ENST00000401473 IGKV1D-13A0A0B4J2D9 117 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 ANKRD20A5PA0PJZ0 165 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 LEUTXA8MZ59 168 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 CD74P04233 296 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 IGKV1-13P0DP09 117 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 FAAP20Q6NZ36 180 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 EDARADDQ8WWZ3 215 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 RBMXL1Q96E39 390 aaKnown RBP12.87□□□□□ -0.35
HMGA1-204ENST00000401473 ZNF251Q9BRH9 671 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 PRDM13Q9H4Q3 707 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 FAM96BQ9Y3D0 163 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 AADACP22760 399 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 REG1BP48304 166 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 RAB13P51153 203 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 ZNF137PP52743 207 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 TAS2R19P59542 299 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 VAX1Q5SQQ9 334 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 TPTE2P1Q5T6R2 138 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 STEAP1BQ6NZ63 245 aa12.87□□□□□ -0.35
HMGA1-204ENST00000401473 ZNF107Q9UII5 783 aaPredicted RBP12.87□□□□□ -0.35
HMGA1-204ENST00000401473 SAA2-SAA4A0A096LPE2 208 aa12.86□□□□□ -0.35
HMGA1-204ENST00000401473 IGLV2-14P01704 120 aa12.86□□□□□ -0.35
HMGA1-204ENST00000401473 FBP1P09467 338 aa12.86□□□□□ -0.35
HMGA1-204ENST00000401473 SAA2P0DJI9 122 aaPredicted RBP12.86□□□□□ -0.35
HMGA1-204ENST00000401473 LINC00205P59089 165 aa12.86□□□□□ -0.35
HMGA1-204ENST00000401473 PLA1AQ53H76 456 aa12.86□□□□□ -0.35
HMGA1-204ENST00000401473 RPL39P5Q59GN2 51 aa12.86□□□□□ -0.35
HMGA1-204ENST00000401473 SIGLECL1Q8N7X8 197 aa12.86□□□□□ -0.35
HMGA1-204ENST00000401473 CREB3L1Q96BA8 519 aa12.86□□□□□ -0.35
HMGA1-204ENST00000401473 ZNF2Q9BSG1 426 aaPredicted RBP12.86□□□□□ -0.35
HMGA1-204ENST00000401473 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
HMGA1-204ENST00000401473 TAS2R8Q9NYW2 309 aa12.86□□□□□ -0.35
HMGA1-204ENST00000401473 RAB29O14966 203 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 PPYP01298 95 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 CSF1P09603 554 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 ZNF735P0CB33 412 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 RAB7AP51149 207 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 LSAMPQ13449 338 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 KLF9Q13886 244 aaPredicted RBP12.85□□□□□ -0.35
HMGA1-204ENST00000401473 RNASE10Q5GAN6 216 aaKnown RBP12.85□□□□□ -0.35
HMGA1-204ENST00000401473 Q6YL49 198 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 PRIMA1Q86XR5 153 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 OR4C16Q8NGL9 310 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 OR6F1Q8NGZ6 308 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 OR56B4Q8NH76 319 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 PIFOQ8TCI5 191 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 RTN4IP1Q8WWV3 396 aaPredicted RBP12.85□□□□□ -0.35
HMGA1-204ENST00000401473 S100ZQ8WXG8 99 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 RPEQ96AT9 228 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 C5orf30Q96GV9 206 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 AMMECR1Q9Y4X0 333 aaPredicted RBP12.85□□□□□ -0.35
HMGA1-204ENST00000401473 RAB3DO95716 219 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 PPP5CP53041 499 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 TSPAN5P62079 268 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 AADACL3Q5VUY0 350 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 OR2D2Q9H210 308 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 PIPOXQ9P0Z9 390 aa12.85□□□□□ -0.35
HMGA1-204ENST00000401473 RBM7Q9Y580 266 aaKnown RBP12.85□□□□□ -0.35
HMGA1-204ENST00000401473 A0A1W2PPI3 338 aa12.84□□□□□ -0.35
HMGA1-204ENST00000401473 HSD17B6O14756 317 aa12.84□□□□□ -0.35
HMGA1-204ENST00000401473 IL7P13232 177 aa12.84□□□□□ -0.35
HMGA1-204ENST00000401473 TBPP20226 339 aa12.84□□□□□ -0.35
HMGA1-204ENST00000401473 CD24P25063 80 aa12.84□□□□□ -0.35
HMGA1-204ENST00000401473 CEACAM3P40198 252 aa12.84□□□□□ -0.35
HMGA1-204ENST00000401473 LUMP51884 338 aaPredicted RBP12.84□□□□□ -0.35
HMGA1-204ENST00000401473 ZNF833PQ6ZTB9 187 aa12.84□□□□□ -0.35
HMGA1-204ENST00000401473 TOMM5Q8N4H5 51 aa12.84□□□□□ -0.35
HMGA1-204ENST00000401473 GHITMQ9H3K2 345 aa12.84□□□□□ -0.35
HMGA1-204ENST00000401473 ESM1Q9NQ30 184 aa12.84□□□□□ -0.35
HMGA1-204ENST00000401473 SDHAF2Q9NX18 166 aa12.84□□□□□ -0.35
HMGA1-204ENST00000401473 OR5H14A6NHG9 310 aa12.83□□□□□ -0.36
HMGA1-204ENST00000401473 AKAIN1P0CW23 69 aa12.83□□□□□ -0.36
HMGA1-204ENST00000401473 IER3P46695 156 aa12.83□□□□□ -0.36
HMGA1-204ENST00000401473 FXYD4P59646 89 aa12.83□□□□□ -0.36
HMGA1-204ENST00000401473 ZNF816Q0VGE8 651 aaPredicted RBP12.83□□□□□ -0.36
HMGA1-204ENST00000401473 FBLN7Q53RD9 439 aa12.83□□□□□ -0.36
HMGA1-204ENST00000401473 ACTBL2Q562R1 376 aa12.83□□□□□ -0.36
HMGA1-204ENST00000401473 DRAXINQ8NBI3 349 aaPredicted RBP12.83□□□□□ -0.36
HMGA1-204ENST00000401473 TOMM40LQ969M1 308 aa12.83□□□□□ -0.36
HMGA1-204ENST00000401473 MRGPRFQ96AM1 343 aa12.83□□□□□ -0.36
HMGA1-204ENST00000401473 SSX3Q99909 188 aa12.83□□□□□ -0.36
HMGA1-204ENST00000401473 IGHV1-3A0A0C4DH29 117 aa12.82□□□□□ -0.36
HMGA1-204ENST00000401473 VGLL3A8MV65 326 aa12.82□□□□□ -0.36
HMGA1-204ENST00000401473 IGHV4-59P01825 116 aa12.82□□□□□ -0.36
HMGA1-204ENST00000401473 GAPDHP04406 335 aaKnown RBP12.82□□□□□ -0.36
HMGA1-204ENST00000401473 IFNA6P05013 189 aa12.82□□□□□ -0.36
HMGA1-204ENST00000401473 CD40LGP29965 261 aa12.82□□□□□ -0.36
HMGA1-204ENST00000401473 GPR12P47775 334 aa12.82□□□□□ -0.36
HMGA1-204ENST00000401473 SRSF2Q01130 221 aaKnown RBP12.82□□□□□ -0.36
HMGA1-204ENST00000401473 LHFPL1Q86WI0 220 aa12.82□□□□□ -0.36
HMGA1-204ENST00000401473 SECTM1Q8WVN6 248 aa12.82□□□□□ -0.36
HMGA1-204ENST00000401473 ZDHHC16Q969W1 377 aa12.82□□□□□ -0.36
HMGA1-204ENST00000401473 MOB3AQ96BX8 217 aa12.82□□□□□ -0.36
HMGA1-204ENST00000401473 DUX5Q96PT3 197 aa12.82□□□□□ -0.36
HMGA1-204ENST00000401473 HRASLSQ9HDD0 168 aa12.82□□□□□ -0.36
HMGA1-204ENST00000401473 CCL28Q9NRJ3 127 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms