RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 OR2S2Q9NQN1 319 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 CREBBPQ92793 2442 aa9.66□□□□□ -0.86
SKA3-203ENST00000400018 TMEM30CPA0ZSE6 113 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 HLA-DRB3P79483 266 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 LCN2P80188 198 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 RBM39Q14498 530 aaKnown RBP9.65□□□□□ -0.86
SKA3-203ENST00000400018 IZUMO4Q1ZYL8 232 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 BTN2A1Q7KYR7 527 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 MUC20Q8N307 709 aaPredicted RBP9.65□□□□□ -0.86
SKA3-203ENST00000400018 BPIFCQ8NFQ6 507 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 SCARB1Q8WTV0 552 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 ANAPC10Q9UM13 185 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 RBM7Q9Y580 266 aaKnown RBP9.65□□□□□ -0.86
SKA3-203ENST00000400018 PLXNB1O43157 2135 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 TRAV38-1A0A0B4J264 116 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 DISC1C4P0D8 188 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 KCNAB3O43448 404 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 NXPH3O95157 252 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 ZFP36P26651 326 aaKnown RBP9.65□□□□□ -0.86
SKA3-203ENST00000400018 PPOXP50336 477 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 RPL31P62899 125 aaKnown RBP9.65□□□□□ -0.86
SKA3-203ENST00000400018 DIAPH2-AS1Q14236 149 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 C17orf58Q2M2W7 97 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 TEX36Q5VZQ5 186 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 ZNF818PQ6ZRF7 136 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 KCTD9Q7L273 389 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 TERB2Q8NHR7 220 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 C5orf30Q96GV9 206 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 MMP26Q9NRE1 261 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 KCNS2Q9ULS6 477 aa9.65□□□□□ -0.86
SKA3-203ENST00000400018 IGHV4-30-2A0A087WSY4 118 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 PPYP01298 95 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 ZNF16P17020 682 aaPredicted RBP9.64□□□□□ -0.87
SKA3-203ENST00000400018 TMEM200BQ69YZ2 307 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 PNKDQ8N490 385 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 EIF4E3Q8N5X7 224 aaKnown RBP9.64□□□□□ -0.87
SKA3-203ENST00000400018 OR51H1Q8NH63 302 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 C15orf40Q8WUR7 153 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 SNX22Q96L94 193 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 TMEM68Q96MH6 324 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 NUDT16L1Q9BRJ7 211 aaKnown RBP9.64□□□□□ -0.87
SKA3-203ENST00000400018 SPACA1Q9HBV2 294 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 SIRT7Q9NRC8 400 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 NECAP2Q9NVZ3 263 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 PCDHB10Q9UN67 800 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 FAM90A10PA6NDY2 464 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 FAM90A18PA6NE21 464 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 FAM90A16PA6NEW6 464 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 FAM90A20PA6NIJ5 464 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 FAM90A8PA6NJQ4 464 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 FAM90A7PA6NKC0 464 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 FAM90A22PA8MWA6 464 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 FAM90A12PA8MX19 464 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 FAM90A5PA8MXJ8 464 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 FAM90A23PA8MXZ1 464 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 C22orf46C9J442 243 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 TXNL1O43396 289 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 FBP1P09467 338 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 FAM90A15PP0C7V4 464 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 FAM90A13PP0C7W8 464 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 FAM90A14PP0C7W9 464 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 FAM90A24PP0C7X0 464 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 DTYMKP23919 212 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 REG1BP48304 166 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 SSX8Q7RTT4 187 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 PUSL1Q8N0Z8 303 aaKnown RBP9.64□□□□□ -0.87
SKA3-203ENST00000400018 GAPTQ8N292 157 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 PSMG3-AS1Q96PY0 264 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 PSG11Q9UQ72 335 aa9.64□□□□□ -0.87
SKA3-203ENST00000400018 CLN5O75503 358 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 ADAP1O75689 374 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 S100A8P05109 93 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 MUC1P15941 1255 aaPredicted RBP9.63□□□□□ -0.87
SKA3-203ENST00000400018 FAUP35544 74 aaKnown RBP9.63□□□□□ -0.87
SKA3-203ENST00000400018 DCAF12L2Q5VW00 463 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 ZNF841Q6ZN19 808 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 C1orf87Q8N0U7 546 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 OR10J5Q8NHC4 309 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 SDSLQ96GA7 329 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 SEC22AQ96IW7 307 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 DIRC2Q96SL1 478 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 NUBP2Q9Y5Y2 271 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 NAV3Q8IVL0 2385 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 MTORP42345 2549 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 IGHV3OR16-10A0A075B7F0 116 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 DBX1A6NMT0 343 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 ZNF729A6NN14 1252 aaPredicted RBP9.63□□□□□ -0.87
SKA3-203ENST00000400018 C15orf65H3BRN8 121 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 TNFRSF13BO14836 293 aaPredicted RBP9.63□□□□□ -0.87
SKA3-203ENST00000400018 MGST3O14880 152 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 F12P00748 615 aaPredicted RBP9.63□□□□□ -0.87
SKA3-203ENST00000400018 HLA-AP01891 365 aaKnown RBP9.63□□□□□ -0.87
SKA3-203ENST00000400018 OR4E1P0C645 316 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 GNRHRP30968 328 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 GPR6P46095 362 aaPredicted RBP9.63□□□□□ -0.87
SKA3-203ENST00000400018 PIGPP57054 158 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 ARF6P62330 175 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 SUPT4H1P63272 117 aaKnown RBP9.63□□□□□ -0.87
SKA3-203ENST00000400018 KLRD1Q13241 179 aa9.63□□□□□ -0.87
SKA3-203ENST00000400018 RPL39P5Q59GN2 51 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms