RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SLC25A38Q96DW6 304 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 ZNF251Q9BRH9 671 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 RNF150Q9ULK6 438 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 CMYA5Q8N3K9 4069 aa11.19□□□□□ -0.62
HLA-DQB1-202ENST00000399079 TMEM235A6NFC5 223 aa11.18□□□□□ -0.62
HLA-DQB1-202ENST00000399079 M0QZ24 198 aa11.18□□□□□ -0.62
HLA-DQB1-202ENST00000399079 BET1O15155 118 aa11.18□□□□□ -0.62
HLA-DQB1-202ENST00000399079 TSPAN15O95858 294 aa11.18□□□□□ -0.62
HLA-DQB1-202ENST00000399079 MOSP00540 346 aa11.18□□□□□ -0.62
HLA-DQB1-202ENST00000399079 F2RL1P55085 397 aa11.18□□□□□ -0.62
HLA-DQB1-202ENST00000399079 NCS1P62166 190 aa11.18□□□□□ -0.62
HLA-DQB1-202ENST00000399079 C10orf99Q6UWK7 81 aa11.18□□□□□ -0.62
HLA-DQB1-202ENST00000399079 OR4A4PQ8NGN8 299 aa11.18□□□□□ -0.62
HLA-DQB1-202ENST00000399079 OR13F1Q8NGS4 319 aa11.18□□□□□ -0.62
HLA-DQB1-202ENST00000399079 RITA1Q96K30 269 aa11.18□□□□□ -0.62
HLA-DQB1-202ENST00000399079 NABP2Q9BQ15 211 aa11.18□□□□□ -0.62
HLA-DQB1-202ENST00000399079 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.18□□□□□ -0.62
HLA-DQB1-202ENST00000399079 PLSCR3Q9NRY6 295 aa11.18□□□□□ -0.62
HLA-DQB1-202ENST00000399079 RDH8Q9NYR8 311 aa11.18□□□□□ -0.62
HLA-DQB1-202ENST00000399079 RAB29O14966 203 aa11.17□□□□□ -0.62
HLA-DQB1-202ENST00000399079 FGF16O43320 207 aa11.17□□□□□ -0.62
HLA-DQB1-202ENST00000399079 TALDO1P37837 337 aa11.17□□□□□ -0.62
HLA-DQB1-202ENST00000399079 VBP1P61758 197 aa11.17□□□□□ -0.62
HLA-DQB1-202ENST00000399079 ZNF260Q3ZCT1 412 aa11.17□□□□□ -0.62
HLA-DQB1-202ENST00000399079 HACD4Q5VWC8 232 aa11.17□□□□□ -0.62
HLA-DQB1-202ENST00000399079 CENPVQ7Z7K6 275 aaPredicted RBP11.17□□□□□ -0.62
HLA-DQB1-202ENST00000399079 Q8N9W7 124 aa11.17□□□□□ -0.62
HLA-DQB1-202ENST00000399079 OR5AU1Q8NGC0 362 aa11.17□□□□□ -0.62
HLA-DQB1-202ENST00000399079 NUDCD2Q8WVJ2 157 aa11.17□□□□□ -0.62
HLA-DQB1-202ENST00000399079 PIPOXQ9P0Z9 390 aa11.17□□□□□ -0.62
HLA-DQB1-202ENST00000399079 ETV7Q9Y603 341 aa11.17□□□□□ -0.62
HLA-DQB1-202ENST00000399079 LINC01548A6NM66 108 aa11.16□□□□□ -0.62
HLA-DQB1-202ENST00000399079 PROP1O75360 226 aa11.16□□□□□ -0.62
HLA-DQB1-202ENST00000399079 FBXO24O75426 580 aa11.16□□□□□ -0.62
HLA-DQB1-202ENST00000399079 SCAND1P57086 179 aa11.16□□□□□ -0.62
HLA-DQB1-202ENST00000399079 KIR2DS1Q14954 304 aa11.16□□□□□ -0.62
HLA-DQB1-202ENST00000399079 GLDNQ6ZMI3 551 aaPredicted RBP11.16□□□□□ -0.62
HLA-DQB1-202ENST00000399079 EDARADDQ8WWZ3 215 aa11.16□□□□□ -0.62
HLA-DQB1-202ENST00000399079 NOL4LQ96MY1 436 aaPredicted RBP11.16□□□□□ -0.62
HLA-DQB1-202ENST00000399079 S1PR3Q99500 378 aa11.16□□□□□ -0.62
HLA-DQB1-202ENST00000399079 CITED2Q99967 270 aaPredicted RBP11.16□□□□□ -0.62
HLA-DQB1-202ENST00000399079 CABLES2Q9BTV7 478 aa11.16□□□□□ -0.62
HLA-DQB1-202ENST00000399079 ST6GALNAC5Q9BVH7 336 aa11.16□□□□□ -0.62
HLA-DQB1-202ENST00000399079 NAA50Q9GZZ1 169 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB1-202ENST00000399079 LINC00527Q9UJ94 153 aa11.16□□□□□ -0.62
HLA-DQB1-202ENST00000399079 TET2Q6N021 2002 aaPredicted RBP11.16□□□□□ -0.62
HLA-DQB1-202ENST00000399079 TRAV18A0A075B6X5 111 aa11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 TRBV6-7A0A0A0MS04 114 aa11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 ITGB1BP1O14713 200 aa11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 SSX5O60225 188 aa11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 SCGNO76038 276 aa11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 GSTP1P09211 210 aaKnown RBP11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 CT45A6P0DMU7 189 aa11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 CT45A5P0DMU8 189 aa11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 CT45A7P0DMV0 189 aa11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 CNTFRP26992 372 aa11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 LINC00205P59089 165 aa11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 ARL6IP1Q15041 203 aa11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 C2orf68Q2NKX9 166 aa11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 NSUN5P1Q3KNT7 163 aa11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 DRAXINQ8NBI3 349 aaPredicted RBP11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 OR10J5Q8NHC4 309 aa11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 FAM110DQ8TAY7 271 aaPredicted RBP11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 PHF21AQ96BD5 680 aa11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 SPATA2Q9UM82 520 aa11.15□□□□□ -0.62
HLA-DQB1-202ENST00000399079 CSF1P09603 554 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 OR8U9P0C7N5 309 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 PTHLHP12272 177 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 DTYMKP23919 212 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 SERPINB10P48595 397 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 GNG2P59768 71 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 ACTBP60709 375 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 TCTEX1D4Q5JR98 221 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 FAM131AQ6UXB0 335 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 ZNF329Q86UD4 541 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 CROCCP3Q8IVE0 287 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 FAM71E2Q8N5Q1 922 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 OR8U1Q8NH10 309 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 ABCG5Q9H222 651 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 LIN7CQ9NUP9 197 aaKnown RBP11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 ADARB2-AS1A8MUL3 147 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 IGHG2P01859 326 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 MMDQ15546 238 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 SRSF7Q16629 238 aaKnown RBP eCLIP11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 FAM71F2Q6NXP2 309 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 Q6ZS49 121 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 SLC35E3Q7Z769 313 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 SLC25A46Q96AG3 418 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 RASL11BQ9BPW5 248 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 TOLLIPQ9H0E2 274 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 MMP27Q9H306 513 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 GHITMQ9H3K2 345 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 ZNF221Q9UK13 617 aa11.14□□□□□ -0.63
HLA-DQB1-202ENST00000399079 A0A1W2PRX2 142 aa11.13□□□□□ -0.63
HLA-DQB1-202ENST00000399079 TFAP2AP05549 437 aa11.13□□□□□ -0.63
HLA-DQB1-202ENST00000399079 GPR12P47775 334 aa11.13□□□□□ -0.63
HLA-DQB1-202ENST00000399079 PITPNAQ00169 270 aa11.13□□□□□ -0.63
HLA-DQB1-202ENST00000399079 CD83Q01151 205 aa11.13□□□□□ -0.63
HLA-DQB1-202ENST00000399079 PNLIPRP3Q17RR3 467 aa11.13□□□□□ -0.63
HLA-DQB1-202ENST00000399079 SAMD12Q8N8I0 201 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms