RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 FOXE3Q13461 319 aa10.53□□□□□ -0.72
VCX3A-202ENST00000398729 SSX1Q16384 188 aa10.53□□□□□ -0.72
VCX3A-202ENST00000398729 C11orf87Q6NUJ2 197 aa10.53□□□□□ -0.72
VCX3A-202ENST00000398729 C18orf65Q6ZTR6 163 aa10.53□□□□□ -0.72
VCX3A-202ENST00000398729 OR56B1Q8NGI3 324 aa10.53□□□□□ -0.72
VCX3A-202ENST00000398729 EDARADDQ8WWZ3 215 aa10.53□□□□□ -0.72
VCX3A-202ENST00000398729 CMSS1Q9BQ75 279 aaKnown RBP10.53□□□□□ -0.72
VCX3A-202ENST00000398729 HDHD3Q9BSH5 251 aaPredicted RBP10.53□□□□□ -0.72
VCX3A-202ENST00000398729 PECRQ9BY49 303 aa10.53□□□□□ -0.72
VCX3A-202ENST00000398729 C12orf4Q9NQ89 552 aa10.53□□□□□ -0.72
VCX3A-202ENST00000398729 SLC23A1Q9UHI7 598 aa10.53□□□□□ -0.72
VCX3A-202ENST00000398729 ZNF580Q9UK33 172 aa10.53□□□□□ -0.72
VCX3A-202ENST00000398729 RYR2Q92736 4967 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 FOXI3A8MTJ6 420 aaPredicted RBP10.52□□□□□ -0.73
VCX3A-202ENST00000398729 ITGB1BP1O14713 200 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 PDCD5O14737 125 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 NBR2O15453 112 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 HSPA12AO43301 675 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 DENRO43583 198 aaKnown RBP10.52□□□□□ -0.73
VCX3A-202ENST00000398729 IGF1P05019 195 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 RPLP1P05386 114 aaKnown RBP10.52□□□□□ -0.73
VCX3A-202ENST00000398729 ELANEP08246 267 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 OR5H8P0DN80 308 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 MYL9P24844 172 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 TMEM50BP56557 158 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 HES5Q5TA89 166 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 DPF1Q92782 380 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 ARHGAP5-AS1Q96IT6 56 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 P2RX4Q99571 388 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 CHCHD6Q9BRQ6 235 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 MCRIP2Q9BUT9 160 aaKnown RBP10.52□□□□□ -0.73
VCX3A-202ENST00000398729 GHITMQ9H3K2 345 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 Q9N2K0 584 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 KIAA1456Q9P272 454 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 RAB22AQ9UL26 194 aa10.52□□□□□ -0.73
VCX3A-202ENST00000398729 EPPK1P58107 5090 aaKnown RBP10.52□□□□□ -0.73
VCX3A-202ENST00000398729 DYNC2H1Q8NCM8 4307 aaKnown RBP10.51□□□□□ -0.73
VCX3A-202ENST00000398729 TRAV1-2A0A0B4J238 106 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 TMEM272A0A1B0GTI8 110 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 K7EIL1 84 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 LDLRAD4O15165 306 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 MRPS14O60783 128 aaKnown RBP10.51□□□□□ -0.73
VCX3A-202ENST00000398729 ATP6V1G2O95670 118 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 IGHG4P01861 327 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 HLA-DRB1P01911 266 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 CNTFRP26992 372 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 CEACAM6P40199 344 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 CDX1P47902 265 aaPredicted RBP10.51□□□□□ -0.73
VCX3A-202ENST00000398729 GABARAPL2P60520 117 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 MRPS15P82914 257 aaKnown RBP10.51□□□□□ -0.73
VCX3A-202ENST00000398729 CFHR3Q02985 330 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 RPL39P5Q59GN2 51 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 PLAC9Q5JTB6 97 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 LCNL1Q6ZST4 164 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 RNF152Q8N8N0 203 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 NPBQ8NG41 125 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 ABHD14BQ96IU4 210 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 RITA1Q96K30 269 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 KCTD7Q96MP8 289 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 NDUFB11Q9NX14 153 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 OR1A1Q9P1Q5 309 aa10.51□□□□□ -0.73
VCX3A-202ENST00000398729 TRDV1A0A1B0GX56 115 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 OR5H14A6NHG9 310 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 IFITM5A6NNB3 132 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 CCL24O00175 119 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 SCTP09683 121 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 CT45A6P0DMU7 189 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 CT45A5P0DMU8 189 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 CT45A7P0DMV0 189 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 GALP22466 123 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 MC5RP33032 325 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 OR10A3P58181 314 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 C5orf64Q2M2E5 130 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 LIN54Q6MZP7 749 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 CD200R1LQ6Q8B3 271 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 FAM131AQ6UXB0 335 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 OR8U1Q8NH10 309 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 RAB3CQ96E17 227 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 DUX3Q96PT4 197 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 AGMATQ9BSE5 352 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 PARP12Q9H0J9 701 aaKnown RBP10.5□□□□□ -0.73
VCX3A-202ENST00000398729 C11orf54Q9H0W9 315 aaPredicted RBP10.5□□□□□ -0.73
VCX3A-202ENST00000398729 OR51J1Q9H342 316 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 Q9H521 79 aa10.5□□□□□ -0.73
VCX3A-202ENST00000398729 IGHV7-81A0A0B4J1V7 117 aa10.49□□□□□ -0.73
VCX3A-202ENST00000398729 TRDCB7Z8K6 153 aa10.49□□□□□ -0.73
VCX3A-202ENST00000398729 H7C2Y5 167 aa10.49□□□□□ -0.73
VCX3A-202ENST00000398729 ATP6V0E1O15342 81 aa10.49□□□□□ -0.73
VCX3A-202ENST00000398729 NDUFA3O95167 84 aa10.49□□□□□ -0.73
VCX3A-202ENST00000398729 GSTP1P09211 210 aaKnown RBP10.49□□□□□ -0.73
VCX3A-202ENST00000398729 CD3GP09693 182 aa10.49□□□□□ -0.73
VCX3A-202ENST00000398729 RAB3BP20337 219 aa10.49□□□□□ -0.73
VCX3A-202ENST00000398729 GADD45AP24522 165 aa10.49□□□□□ -0.73
VCX3A-202ENST00000398729 PSMB8P28062 276 aa10.49□□□□□ -0.73
VCX3A-202ENST00000398729 RAB25P57735 213 aa10.49□□□□□ -0.73
VCX3A-202ENST00000398729 EGFEM1PQ0D2K5 195 aa10.49□□□□□ -0.73
VCX3A-202ENST00000398729 KIR2DS1Q14954 304 aa10.49□□□□□ -0.73
VCX3A-202ENST00000398729 TMEM65Q6PI78 240 aa10.49□□□□□ -0.73
VCX3A-202ENST00000398729 GLDNQ6ZMI3 551 aaPredicted RBP10.49□□□□□ -0.73
VCX3A-202ENST00000398729 PTX4Q96A99 478 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms