RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 ING3Q9NXR8 418 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 COMMD3Q9UBI1 195 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 PSG11Q9UQ72 335 aa12.59□□□□□ -0.39
CUX2-202ENST00000397643 AMMECR1Q9Y4X0 333 aaPredicted RBP12.59□□□□□ -0.39
CUX2-202ENST00000397643 AP4M1O00189 453 aa12.58□□□□□ -0.4
CUX2-202ENST00000397643 SCGNO76038 276 aa12.58□□□□□ -0.4
CUX2-202ENST00000397643 FUT3P21217 361 aa12.58□□□□□ -0.4
CUX2-202ENST00000397643 PLA2G7Q13093 441 aa12.58□□□□□ -0.4
CUX2-202ENST00000397643 FOXE3Q13461 319 aa12.58□□□□□ -0.4
CUX2-202ENST00000397643 MADCAM1Q13477 382 aa12.58□□□□□ -0.4
CUX2-202ENST00000397643 EBI3Q14213 229 aa12.58□□□□□ -0.4
CUX2-202ENST00000397643 PNLIPRP3Q17RR3 467 aa12.58□□□□□ -0.4
CUX2-202ENST00000397643 PAN3Q58A45 887 aaKnown RBP12.58□□□□□ -0.4
CUX2-202ENST00000397643 OR8H3Q8N146 312 aa12.58□□□□□ -0.4
CUX2-202ENST00000397643 FAM89BQ8N5H3 189 aa12.58□□□□□ -0.4
CUX2-202ENST00000397643 Q8N6K4 173 aa12.58□□□□□ -0.4
CUX2-202ENST00000397643 SAMD12Q8N8I0 201 aa12.58□□□□□ -0.4
CUX2-202ENST00000397643 LINC00574Q9H8X3 128 aa12.58□□□□□ -0.4
CUX2-202ENST00000397643 RHBDL2Q9NX52 303 aa12.58□□□□□ -0.4
CUX2-202ENST00000397643 SMAD5-AS1Q9Y6J3 95 aa12.58□□□□□ -0.4
CUX2-202ENST00000397643 HYDINQ4G0P3 5121 aa12.58□□□□□ -0.4
CUX2-202ENST00000397643 TRAV24A0A0B4J272 114 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 PDCD6O75340 191 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 GLAP06280 429 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 LYL1P12980 280 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 BLVRBP30043 206 aaPredicted RBP12.57□□□□□ -0.4
CUX2-202ENST00000397643 VEGFCP49767 419 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 RAB7AP51149 207 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 ZNF260Q3ZCT1 412 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 CXorf66Q5JRM2 361 aaPredicted RBP12.57□□□□□ -0.4
CUX2-202ENST00000397643 UBE2NLQ5JXB2 153 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 TGIF2LXQ8IUE1 241 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 SUMF2Q8NBJ7 301 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 OR13A1Q8NGR1 328 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 CMTM3Q96MX0 182 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 NICN1Q9BSH3 213 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 DPCDQ9BVM2 203 aaPredicted RBP12.57□□□□□ -0.4
CUX2-202ENST00000397643 SLIRPQ9GZT3 109 aaKnown RBP12.57□□□□□ -0.4
CUX2-202ENST00000397643 ABCG5Q9H222 651 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 CALYQ9NYX4 217 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 OR6C3Q9NZP0 311 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 RCC2Q9P258 522 aaKnown RBP12.57□□□□□ -0.4
CUX2-202ENST00000397643 PEX16Q9Y5Y5 336 aa12.57□□□□□ -0.4
CUX2-202ENST00000397643 A0A075B6Q4 140 aa12.56□□□□□ -0.4
CUX2-202ENST00000397643 A0A0A6YYD4 124 aa12.56□□□□□ -0.4
CUX2-202ENST00000397643 MCRIP1C9JLW8 97 aa12.56□□□□□ -0.4
CUX2-202ENST00000397643 SOCS1O15524 211 aa12.56□□□□□ -0.4
CUX2-202ENST00000397643 ELANEP08246 267 aa12.56□□□□□ -0.4
CUX2-202ENST00000397643 GLP1RP43220 463 aa12.56□□□□□ -0.4
CUX2-202ENST00000397643 KCNJ3P48549 501 aa12.56□□□□□ -0.4
CUX2-202ENST00000397643 ASPHD1Q5U4P2 390 aa12.56□□□□□ -0.4
CUX2-202ENST00000397643 RAB12Q6IQ22 244 aa12.56□□□□□ -0.4
CUX2-202ENST00000397643 Q8N9W7 124 aa12.56□□□□□ -0.4
CUX2-202ENST00000397643 MCFD2Q8NI22 146 aa12.56□□□□□ -0.4
CUX2-202ENST00000397643 NEK7Q8TDX7 302 aa12.56□□□□□ -0.4
CUX2-202ENST00000397643 C4orf3Q8WVX3 66 aa12.56□□□□□ -0.4
CUX2-202ENST00000397643 S100A16Q96FQ6 103 aaKnown RBP12.56□□□□□ -0.4
CUX2-202ENST00000397643 EAF1Q96JC9 268 aaPredicted RBP12.56□□□□□ -0.4
CUX2-202ENST00000397643 DIABLOQ9NR28 239 aa12.56□□□□□ -0.4
CUX2-202ENST00000397643 LIN7CQ9NUP9 197 aaKnown RBP12.56□□□□□ -0.4
CUX2-202ENST00000397643 PLEKHJ1Q9NW61 149 aa12.56□□□□□ -0.4
CUX2-202ENST00000397643 A0A0A6YYH2 397 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 A6NJ64 397 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 NPIPB11E5RHQ5 1161 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 HSPB6O14558 160 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 APOA1P02647 267 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 ARL6IP1Q15041 203 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 SIGIRRQ6IA17 410 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 IZUMO1Q8IYV9 350 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 OR10R2Q8NGX6 335 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 MYOZ3Q8TDC0 251 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 SLC25A38Q96DW6 304 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 RAB3CQ96E17 227 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 C6orf62Q9GZU0 229 aaPredicted RBP12.55□□□□□ -0.4
CUX2-202ENST00000397643 PLSCR3Q9NRY6 295 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 IDI2-AS1Q9NZ38 188 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 ZNF581Q9P0T4 197 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 KIF25Q9UIL4 384 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 ADAM30Q9UKF2 790 aa12.55□□□□□ -0.4
CUX2-202ENST00000397643 FOXI3A8MTJ6 420 aaPredicted RBP12.54□□□□□ -0.4
CUX2-202ENST00000397643 FAM25AB3EWG3 89 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 FAM25CB3EWG5 89 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 FAM25GB3EWG6 89 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 RAB27BO00194 218 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 HSD17B6O14756 317 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 RGS5O15539 181 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 HPGDSO60760 199 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 IGHG4P01861 327 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 PSMB8P28062 276 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 GNG10P50151 68 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 TMEM50BP56557 158 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 ZNF816Q0VGE8 651 aaPredicted RBP12.54□□□□□ -0.4
CUX2-202ENST00000397643 OVCH2Q7RTZ1 564 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 CITED4Q96RK1 184 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 HSPB9Q9BQS6 159 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 GON7Q9BXV9 100 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 NXF2Q9GZY0 626 aaKnown RBP12.54□□□□□ -0.4
CUX2-202ENST00000397643 NCOR1P1Q9H4R4 102 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 HSF4Q9ULV5 492 aa12.54□□□□□ -0.4
CUX2-202ENST00000397643 A3GALT2U3KPV4 340 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms