RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CD1BP29016 333 aa20.29■□□□□ 0.84
TSPAN4-207ENST00000397411 OR3A3P47888 321 aa20.29■□□□□ 0.84
TSPAN4-207ENST00000397411 BLCAPP62952 87 aa20.29■□□□□ 0.84
TSPAN4-207ENST00000397411 AP3S1Q92572 193 aa20.29■□□□□ 0.84
TSPAN4-207ENST00000397411 GHITMQ9H3K2 345 aa20.29■□□□□ 0.84
TSPAN4-207ENST00000397411 ZNF221Q9UK13 617 aa20.29■□□□□ 0.84
TSPAN4-207ENST00000397411 RNF150Q9ULK6 438 aa20.29■□□□□ 0.84
TSPAN4-207ENST00000397411 RBM7Q9Y580 266 aaKnown RBP20.29■□□□□ 0.84
TSPAN4-207ENST00000397411 M0QZK8 103 aa20.28■□□□□ 0.84
TSPAN4-207ENST00000397411 ITGB1BP1O14713 200 aa20.28■□□□□ 0.84
TSPAN4-207ENST00000397411 XRCC3O43542 346 aa20.28■□□□□ 0.84
TSPAN4-207ENST00000397411 C9orf152Q5JTZ5 239 aa20.28■□□□□ 0.84
TSPAN4-207ENST00000397411 Q6ZS49 121 aa20.28■□□□□ 0.84
TSPAN4-207ENST00000397411 ODF3L1Q8IXM7 274 aa20.28■□□□□ 0.84
TSPAN4-207ENST00000397411 ABHD14BQ96IU4 210 aa20.28■□□□□ 0.84
TSPAN4-207ENST00000397411 PARP12Q9H0J9 701 aaKnown RBP20.28■□□□□ 0.84
TSPAN4-207ENST00000397411 AUNIPQ9H7T9 357 aa20.28■□□□□ 0.84
TSPAN4-207ENST00000397411 MOB4Q9Y3A3 225 aa20.28■□□□□ 0.84
TSPAN4-207ENST00000397411 SAA2-SAA4A0A096LPE2 208 aa20.27■□□□□ 0.84
TSPAN4-207ENST00000397411 SAA2P0DJI9 122 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-207ENST00000397411 ZNF182P17025 639 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-207ENST00000397411 HERPUD1Q15011 391 aa20.27■□□□□ 0.84
TSPAN4-207ENST00000397411 TMEM69Q5SWH9 247 aa20.27■□□□□ 0.84
TSPAN4-207ENST00000397411 C11orf88Q6PI97 169 aa20.27■□□□□ 0.84
TSPAN4-207ENST00000397411 RAB2BQ8WUD1 216 aa20.27■□□□□ 0.84
TSPAN4-207ENST00000397411 EAF1Q96JC9 268 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-207ENST00000397411 IFI27L2Q9H2X8 130 aa20.27■□□□□ 0.84
TSPAN4-207ENST00000397411 ZNF702PQ9H963 129 aa20.27■□□□□ 0.84
TSPAN4-207ENST00000397411 TRBV6-7A0A0A0MS04 114 aa20.26■□□□□ 0.83
TSPAN4-207ENST00000397411 NCBP2LA6PVI3 153 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-207ENST00000397411 SSX5O60225 188 aa20.26■□□□□ 0.83
TSPAN4-207ENST00000397411 MOSP00540 346 aa20.26■□□□□ 0.83
TSPAN4-207ENST00000397411 CTXN2P0C2S0 81 aa20.26■□□□□ 0.83
TSPAN4-207ENST00000397411 SOX6P35712 828 aa20.26■□□□□ 0.83
TSPAN4-207ENST00000397411 GPR12P47775 334 aa20.26■□□□□ 0.83
TSPAN4-207ENST00000397411 TMBIM6P55061 237 aa20.26■□□□□ 0.83
TSPAN4-207ENST00000397411 PROK1P58294 105 aa20.26■□□□□ 0.83
TSPAN4-207ENST00000397411 HABP2Q14520 560 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-207ENST00000397411 ABCA11PQ4W5N1 156 aa20.26■□□□□ 0.83
TSPAN4-207ENST00000397411 ZNF833PQ6ZTB9 187 aa20.26■□□□□ 0.83
TSPAN4-207ENST00000397411 WFDC12Q8WWY7 111 aa20.26■□□□□ 0.83
TSPAN4-207ENST00000397411 CABLES2Q9BTV7 478 aa20.26■□□□□ 0.83
TSPAN4-207ENST00000397411 MRPL20Q9BYC9 149 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-207ENST00000397411 DIRAS3O95661 229 aa20.25■□□□□ 0.83
TSPAN4-207ENST00000397411 VSIG10L2P0DP72 767 aa20.25■□□□□ 0.83
TSPAN4-207ENST00000397411 FBLN7Q53RD9 439 aa20.25■□□□□ 0.83
TSPAN4-207ENST00000397411 RPL39P5Q59GN2 51 aa20.25■□□□□ 0.83
TSPAN4-207ENST00000397411 CMTM3Q96MX0 182 aa20.25■□□□□ 0.83
TSPAN4-207ENST00000397411 MRPS7Q9Y2R9 242 aaKnown RBP20.25■□□□□ 0.83
TSPAN4-207ENST00000397411 IGKV1D-8A0A087WSZ0 117 aa20.24■□□□□ 0.83
TSPAN4-207ENST00000397411 FAM25AB3EWG3 89 aa20.24■□□□□ 0.83
TSPAN4-207ENST00000397411 FAM25CB3EWG5 89 aa20.24■□□□□ 0.83
TSPAN4-207ENST00000397411 FAM25GB3EWG6 89 aa20.24■□□□□ 0.83
TSPAN4-207ENST00000397411 ZNF736B4DX44 427 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-207ENST00000397411 APOA1P02647 267 aa20.24■□□□□ 0.83
TSPAN4-207ENST00000397411 OR8U9P0C7N5 309 aa20.24■□□□□ 0.83
TSPAN4-207ENST00000397411 VDAC2P45880 294 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-207ENST00000397411 CBX5P45973 191 aa20.24■□□□□ 0.83
TSPAN4-207ENST00000397411 LSAMPQ13449 338 aa20.24■□□□□ 0.83
TSPAN4-207ENST00000397411 EBI3Q14213 229 aa20.24■□□□□ 0.83
TSPAN4-207ENST00000397411 FAM71F2Q6NXP2 309 aa20.24■□□□□ 0.83
TSPAN4-207ENST00000397411 CNIH2Q6PI25 160 aa20.24■□□□□ 0.83
TSPAN4-207ENST00000397411 OR8U1Q8NH10 309 aa20.24■□□□□ 0.83
TSPAN4-207ENST00000397411 NABP2Q9BQ15 211 aa20.24■□□□□ 0.83
TSPAN4-207ENST00000397411 HPGDSO60760 199 aa20.23■□□□□ 0.83
TSPAN4-207ENST00000397411 EIF4EP06730 217 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-207ENST00000397411 TAS2R20P59543 309 aa20.23■□□□□ 0.83
TSPAN4-207ENST00000397411 ARPC4P59998 168 aa20.23■□□□□ 0.83
TSPAN4-207ENST00000397411 Q8N2B8 174 aa20.23■□□□□ 0.83
TSPAN4-207ENST00000397411 BCL7BQ9BQE9 202 aa20.23■□□□□ 0.83
TSPAN4-207ENST00000397411 AGMATQ9BSE5 352 aa20.23■□□□□ 0.83
TSPAN4-207ENST00000397411 IFT46Q9NQC8 304 aa20.23■□□□□ 0.83
TSPAN4-207ENST00000397411 ANXA10Q9UJ72 324 aa20.23■□□□□ 0.83
TSPAN4-207ENST00000397411 SH2D7A6NKC9 451 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-207ENST00000397411 PTHLHP12272 177 aa20.22■□□□□ 0.83
TSPAN4-207ENST00000397411 SRSF4Q08170 494 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-207ENST00000397411 SPCS2Q15005 226 aa20.22■□□□□ 0.83
TSPAN4-207ENST00000397411 Q6ZS46 218 aa20.22■□□□□ 0.83
TSPAN4-207ENST00000397411 BEST4Q8NFU0 473 aa20.22■□□□□ 0.83
TSPAN4-207ENST00000397411 TOLLIPQ9H0E2 274 aa20.22■□□□□ 0.83
TSPAN4-207ENST00000397411 CCDC160A6NGH7 325 aa20.21■□□□□ 0.83
TSPAN4-207ENST00000397411 FCER2P06734 321 aa20.21■□□□□ 0.83
TSPAN4-207ENST00000397411 PRSS3P35030 304 aa20.21■□□□□ 0.83
TSPAN4-207ENST00000397411 HOGA1Q86XE5 327 aa20.21■□□□□ 0.83
TSPAN4-207ENST00000397411 KLHDC1Q8N7A1 406 aa20.21■□□□□ 0.83
TSPAN4-207ENST00000397411 MEIS3P1A6NDR6 274 aa20.2■□□□□ 0.82
TSPAN4-207ENST00000397411 H7C2Y5 167 aa20.2■□□□□ 0.82
TSPAN4-207ENST00000397411 J3QRK9 145 aa20.2■□□□□ 0.82
TSPAN4-207ENST00000397411 FGF16O43320 207 aa20.2■□□□□ 0.82
TSPAN4-207ENST00000397411 ELK1P19419 428 aa20.2■□□□□ 0.82
TSPAN4-207ENST00000397411 H1FOOQ8IZA3 346 aaPredicted RBP20.2■□□□□ 0.82
TSPAN4-207ENST00000397411 GVQW1Q8N7I0 195 aa20.2■□□□□ 0.82
TSPAN4-207ENST00000397411 OR8H1Q8NGG4 311 aa20.2■□□□□ 0.82
TSPAN4-207ENST00000397411 RASL11BQ9BPW5 248 aa20.2■□□□□ 0.82
TSPAN4-207ENST00000397411 ZNF251Q9BRH9 671 aa20.2■□□□□ 0.82
TSPAN4-207ENST00000397411 OR2D2Q9H210 308 aa20.2■□□□□ 0.82
TSPAN4-207ENST00000397411 M0R1X1 148 aa20.19■□□□□ 0.82
TSPAN4-207ENST00000397411 CT45A6P0DMU7 189 aa20.19■□□□□ 0.82
TSPAN4-207ENST00000397411 CT45A5P0DMU8 189 aa20.19■□□□□ 0.82
TSPAN4-207ENST00000397411 CT45A7P0DMV0 189 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms