RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 AKIRIN2Q53H80 203 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 C19orf54Q5BKX5 351 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 XAF1Q6GPH4 301 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 PYHIN1Q6K0P9 492 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 CD200R1LQ6Q8B3 271 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 TMPRSS11AQ6ZMR5 421 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 ZNF833PQ6ZTB9 187 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 LYPD6Q86Y78 171 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 ODF3L1Q8IXM7 274 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 ISOC1Q96CN7 298 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 FAM210AQ96ND0 272 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 LYSTQ99698 3801 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 ABHD14AQ9BUJ0 271 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 ELOVL1Q9BW60 279 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 ALX4Q9H161 411 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-208ENST00000397204 EDA2RQ9HAV5 297 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 BABAM2Q9NXR7 383 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 GAR1Q9NY12 217 aaKnown RBP6.74□□□□□ -1.33
CAPN3-208ENST00000397204 CKLFQ9UBR5 152 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 JPT1Q9UK76 154 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 RNF150Q9ULK6 438 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 TNCP24821 2201 aa6.74□□□□□ -1.33
CAPN3-208ENST00000397204 IGHV4OR15-8A0A075B7B6 117 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 A0A087WW49 117 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 TRBV5-5A0A0J9YX44 114 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 LOC100130705A0A1B0GUX0 176 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 A0A1W2PN81 502 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 NOTOA8MTQ0 251 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 HSPA12AO43301 675 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 SOX15O60248 233 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 CIB2O75838 187 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 IGHV4-30-4P0DP06 118 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 EGR2P11161 476 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-208ENST00000397204 MC5RP33032 325 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 CHRNA7P36544 502 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 PPP1CCP36873 323 aaKnown RBP6.73□□□□□ -1.33
CAPN3-208ENST00000397204 PITPNAQ00169 270 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 ZFAND6Q6FIF0 208 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 GLIPR1L1Q6UWM5 242 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 CBR4Q8N4T8 237 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 OR52L2PQ8NGH6 319 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 ARPC1AQ92747 370 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 GHSRQ92847 366 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 GALMQ96C23 342 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 RDH12Q96NR8 316 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 RNF5Q99942 180 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 MRPL20Q9BYC9 149 aaKnown RBP6.73□□□□□ -1.33
CAPN3-208ENST00000397204 SELENOIQ9C0D9 397 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 SLA2Q9H6Q3 261 aa6.73□□□□□ -1.33
CAPN3-208ENST00000397204 NKX1-2Q9UD57 310 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-208ENST00000397204 UBE2QL1A1L167 161 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 DBX1A6NMT0 343 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 FCN1O00602 326 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 RRHO14718 337 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 RBBP9O75884 186 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 IGLV1-51P01701 117 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 MAS1P04201 325 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 OR3A3P47888 321 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 ETV1P50549 477 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 SRSF7Q16629 238 aaKnown RBP eCLIP6.72□□□□□ -1.33
CAPN3-208ENST00000397204 ECSCRQ19T08 205 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 Q499Y3 187 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 ACTBL2Q562R1 376 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 DMKNQ6E0U4 476 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-208ENST00000397204 FAM71F2Q6NXP2 309 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 ZFP1Q6P2D0 407 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 ZNF562Q6V9R5 426 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 PPP1R27Q86WC6 154 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 ANKRD13BQ86YJ7 626 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 SGPP2Q8IWX5 399 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 C10orf67Q8IYJ2 551 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 OR2AK2Q8NG84 335 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 PYDC1Q8WXC3 89 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 MUL1Q969V5 352 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 ORAI1Q96D31 301 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 SMIM19Q96E16 107 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 KRTAP9-9Q9BYP9 154 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 KRTAP9-4Q9BYQ2 154 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 RANGRFQ9HD47 186 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-208ENST00000397204 CNOT2Q9NZN8 540 aaKnown RBP6.72□□□□□ -1.33
CAPN3-208ENST00000397204 PIPOXQ9P0Z9 390 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 GHRLQ9UBU3 117 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 STEAP1Q9UHE8 339 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 STUB1Q9UNE7 303 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 FBXO7Q9Y3I1 522 aa6.72□□□□□ -1.33
CAPN3-208ENST00000397204 TRAV8-7A0A075B6U6 113 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 TRBV5-7A0A0A0MS05 114 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 IRGMA1A4Y4 181 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 H0Y980 276 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 H3BNX3 289 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 RAB29O14966 203 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 PDCD6O75340 191 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 CRTAPO75718 401 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-208ENST00000397204 IFNA6P05013 189 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 TFAP2AP05549 437 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 CT45A6P0DMU7 189 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 CT45A5P0DMU8 189 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 CT45A7P0DMV0 189 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 MGMTP16455 207 aa6.71□□□□□ -1.34
CAPN3-208ENST00000397204 RPS11P62280 158 aaKnown RBP eCLIP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms