RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 LINC00696Q6ZRV3 163 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 VASH2Q86V25 355 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 Q8IYB0 196 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 AGMATQ9BSE5 352 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 CDH20Q9HBT6 801 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 RAMP3O60896 148 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 OPN1MWP04001 364 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 P0C879 139 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 PGA5P0DJD9 388 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 OPN1MW2P0DN77 364 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 OPN1MW3P0DN78 364 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 ZNF146Q15072 292 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 C4orf17Q53FE4 359 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 FAM180AQ6UWF9 173 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 CENPVQ7Z7K6 275 aaPredicted RBP13.23□□□□□ -0.29
HOXA3-202ENST00000396352 MCEMP1Q8IX19 187 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 C5orf30Q96GV9 206 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 DDA1Q9BW61 102 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 TIMM9Q9Y5J7 89 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 OR5H1A6NKK0 313 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 TGOLN2O43493 480 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 IFNA1P01562 189 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 PLGLB1Q02325 96 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 OR8G2PQ6IF36 304 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 ACSM6Q6P461 480 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 CTDSP1Q9GZU7 261 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 HSPB7Q9UBY9 170 aa13.23□□□□□ -0.29
HOXA3-202ENST00000396352 A0A1W2PNU3 283 aaPredicted RBP13.22□□□□□ -0.29
HOXA3-202ENST00000396352 CD55P08174 381 aa13.22□□□□□ -0.29
HOXA3-202ENST00000396352 CELA3BP08861 270 aa13.22□□□□□ -0.29
HOXA3-202ENST00000396352 HIST1H1BP16401 226 aaKnown RBP13.22□□□□□ -0.29
HOXA3-202ENST00000396352 DCAF10Q5QP82 559 aa13.22□□□□□ -0.29
HOXA3-202ENST00000396352 DIDO1Q9BTC0 2240 aaKnown RBP13.22□□□□□ -0.29
HOXA3-202ENST00000396352 LAMTOR5O43504 91 aa13.22□□□□□ -0.29
HOXA3-202ENST00000396352 MEF2BQ02080 365 aaPredicted RBP13.22□□□□□ -0.29
HOXA3-202ENST00000396352 EIF4EBP1Q13541 118 aaPredicted RBP13.22□□□□□ -0.29
HOXA3-202ENST00000396352 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.22□□□□□ -0.29
HOXA3-202ENST00000396352 LHX4Q969G2 390 aa13.22□□□□□ -0.29
HOXA3-202ENST00000396352 PFDN5Q99471 154 aa13.22□□□□□ -0.29
HOXA3-202ENST00000396352 NAT8Q9UHE5 227 aa13.22□□□□□ -0.29
HOXA3-202ENST00000396352 POLDIP2Q9Y2S7 368 aa13.22□□□□□ -0.29
HOXA3-202ENST00000396352 MED13Q9UHV7 2174 aa13.21□□□□□ -0.29
HOXA3-202ENST00000396352 CDIPTO14735 213 aa13.21□□□□□ -0.29
HOXA3-202ENST00000396352 CLDN1O95832 211 aa13.21□□□□□ -0.29
HOXA3-202ENST00000396352 ERVS71-1P61550 626 aa13.21□□□□□ -0.29
HOXA3-202ENST00000396352 FBXW9Q5XUX1 488 aa13.21□□□□□ -0.29
HOXA3-202ENST00000396352 CYP2G1PQ6ZSU1 146 aa13.21□□□□□ -0.29
HOXA3-202ENST00000396352 ZNF645Q8N7E2 425 aa13.21□□□□□ -0.29
HOXA3-202ENST00000396352 IGHV3-64DA0A0J9YX35 117 aa13.21□□□□□ -0.29
HOXA3-202ENST00000396352 RNF212BA8MTL3 300 aa13.21□□□□□ -0.29
HOXA3-202ENST00000396352 SMPD2O60906 423 aa13.21□□□□□ -0.29
HOXA3-202ENST00000396352 FABP4P15090 132 aa13.21□□□□□ -0.29
HOXA3-202ENST00000396352 MDKP21741 143 aaPredicted RBP13.21□□□□□ -0.29
HOXA3-202ENST00000396352 FAM53AQ6NSI3 398 aaPredicted RBP13.21□□□□□ -0.29
HOXA3-202ENST00000396352 SMIM7Q9BQ49 75 aa13.21□□□□□ -0.29
HOXA3-202ENST00000396352 OR2J1Q9GZK6 312 aa13.21□□□□□ -0.29
HOXA3-202ENST00000396352 SLC39A9Q9NUM3 307 aa13.21□□□□□ -0.29
HOXA3-202ENST00000396352 ABI3Q9P2A4 366 aa13.21□□□□□ -0.29
HOXA3-202ENST00000396352 NXPH2O95156 264 aa13.21□□□□□ -0.3
HOXA3-202ENST00000396352 CEBPDP49716 269 aaPredicted RBP13.21□□□□□ -0.3
HOXA3-202ENST00000396352 MEOX1P50221 254 aa13.21□□□□□ -0.3
HOXA3-202ENST00000396352 RPL30P62888 115 aaKnown RBP13.21□□□□□ -0.3
HOXA3-202ENST00000396352 HNF4GQ14541 408 aa13.21□□□□□ -0.3
HOXA3-202ENST00000396352 ALKBH6Q3KRA9 238 aa13.21□□□□□ -0.3
HOXA3-202ENST00000396352 NANOS1Q8WY41 292 aaKnown RBP13.21□□□□□ -0.3
HOXA3-202ENST00000396352 WDYHV1Q96HA8 205 aa13.21□□□□□ -0.3
HOXA3-202ENST00000396352 SNX22Q96L94 193 aa13.21□□□□□ -0.3
HOXA3-202ENST00000396352 GTF3C1Q12789 2109 aa13.2□□□□□ -0.3
HOXA3-202ENST00000396352 SH2D1BO14796 132 aa13.2□□□□□ -0.3
HOXA3-202ENST00000396352 PSPNO60542 156 aa13.2□□□□□ -0.3
HOXA3-202ENST00000396352 G6PCP35575 357 aa13.2□□□□□ -0.3
HOXA3-202ENST00000396352 TBC1D28Q2M2D7 210 aa13.2□□□□□ -0.3
HOXA3-202ENST00000396352 AHCTF1Q8WYP5 2266 aa13.2□□□□□ -0.3
HOXA3-202ENST00000396352 PMS2P5A8MQ11 134 aa13.2□□□□□ -0.3
HOXA3-202ENST00000396352 KBTBD11O94819 623 aa13.2□□□□□ -0.3
HOXA3-202ENST00000396352 BRWD1-AS2P59051 145 aa13.2□□□□□ -0.3
HOXA3-202ENST00000396352 ADIRFQ15847 76 aa13.2□□□□□ -0.3
HOXA3-202ENST00000396352 ZNF766Q5HY98 468 aa13.2□□□□□ -0.3
HOXA3-202ENST00000396352 DNLZQ5SXM8 178 aa13.2□□□□□ -0.3
HOXA3-202ENST00000396352 NCR3LG1Q68D85 454 aa13.2□□□□□ -0.3
HOXA3-202ENST00000396352 C16orf82Q7Z2V1 217 aa13.2□□□□□ -0.3
HOXA3-202ENST00000396352 OR1L1Q8NH94 360 aa13.2□□□□□ -0.3
HOXA3-202ENST00000396352 OR2D2Q9H210 308 aa13.2□□□□□ -0.3
HOXA3-202ENST00000396352 HMGB3O15347 200 aaKnown RBP13.19□□□□□ -0.3
HOXA3-202ENST00000396352 PFN1P07737 140 aaKnown RBP13.19□□□□□ -0.3
HOXA3-202ENST00000396352 SELEP16581 610 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 PPP1CBP62140 327 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 TLE1Q04724 770 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 LPAL2Q16609 132 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 OR10A7Q8NGE5 316 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 OR4X1Q8NH49 305 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 HIST1H2BLQ99880 126 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 PYGO2Q9BRQ0 406 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 SLC25A22Q9H936 323 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 CLN8Q9UBY8 286 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 KRASP01116 189 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 SP1P08047 785 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 DBX2Q6ZNG2 339 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 FAM186AA6NE01 2351 aa13.19□□□□□ -0.3
HOXA3-202ENST00000396352 ODAMA1E959 279 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms