RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 CCDC58Q4VC31 144 aa12.05□□□□□ -0.48
SNCA-205ENST00000394991 ACTBL2Q562R1 376 aa12.05□□□□□ -0.48
SNCA-205ENST00000394991 LAIR2Q6ISS4 152 aa12.05□□□□□ -0.48
SNCA-205ENST00000394991 PYHIN1Q6K0P9 492 aa12.05□□□□□ -0.48
SNCA-205ENST00000394991 UNQ5815/PRO19632Q6UWF5 114 aa12.05□□□□□ -0.48
SNCA-205ENST00000394991 FAM131AQ6UXB0 335 aa12.05□□□□□ -0.48
SNCA-205ENST00000394991 LINC00322Q6ZN03 302 aaPredicted RBP12.05□□□□□ -0.48
SNCA-205ENST00000394991 AHSA2Q719I0 299 aa12.05□□□□□ -0.48
SNCA-205ENST00000394991 PPP1R27Q86WC6 154 aa12.05□□□□□ -0.48
SNCA-205ENST00000394991 ABHD5Q8WTS1 349 aa12.05□□□□□ -0.48
SNCA-205ENST00000394991 LINC00476Q8WZB0 136 aa12.05□□□□□ -0.48
SNCA-205ENST00000394991 ORAI1Q96D31 301 aa12.05□□□□□ -0.48
SNCA-205ENST00000394991 TUBA4BQ9H853 241 aa12.05□□□□□ -0.48
SNCA-205ENST00000394991 TAF9BQ9HBM6 251 aa12.05□□□□□ -0.48
SNCA-205ENST00000394991 CNOT2Q9NZN8 540 aaKnown RBP12.05□□□□□ -0.48
SNCA-205ENST00000394991 MCRIP1C9JLW8 97 aa12.04□□□□□ -0.48
SNCA-205ENST00000394991 AQP4P55087 323 aa12.04□□□□□ -0.48
SNCA-205ENST00000394991 TRAT1Q6PIZ9 186 aa12.04□□□□□ -0.48
SNCA-205ENST00000394991 ZFP41Q8N8Y5 198 aa12.04□□□□□ -0.48
SNCA-205ENST00000394991 GPR148Q8TDV2 347 aa12.04□□□□□ -0.48
SNCA-205ENST00000394991 TMEM138Q9NPI0 162 aa12.04□□□□□ -0.48
SNCA-205ENST00000394991 PSORS1C1Q9UIG5 152 aa12.04□□□□□ -0.48
SNCA-205ENST00000394991 JPT1Q9UK76 154 aa12.04□□□□□ -0.48
SNCA-205ENST00000394991 CEPT1Q9Y6K0 416 aa12.04□□□□□ -0.48
SNCA-205ENST00000394991 IZUMO1RA6ND01 250 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 H0Y980 276 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 MYL12BO14950 172 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 OGG1O15527 345 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 LALBAP00709 142 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 TRGV3P03979 118 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 GTF2F2P13984 249 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 TMEM267Q0VDI3 215 aaPredicted RBP12.03□□□□□ -0.48
SNCA-205ENST00000394991 KLF5Q13887 457 aaPredicted RBP12.03□□□□□ -0.48
SNCA-205ENST00000394991 AKIRIN2Q53H80 203 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 RAB12Q6IQ22 244 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 LFNGQ8NES3 379 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 OR9G4Q8NGQ1 327 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 FBLIM1Q8WUP2 373 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 TMEM106AQ96A25 262 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 S100A13Q99584 98 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 IFI27L2Q9H2X8 130 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 SLA2Q9H6Q3 261 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 SPACA1Q9HBV2 294 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 PLCXD1Q9NUJ7 323 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 MBNL3Q9NUK0 354 aaKnown RBP12.03□□□□□ -0.48
SNCA-205ENST00000394991 PAK1IP1Q9NWT1 392 aaPredicted RBP12.03□□□□□ -0.48
SNCA-205ENST00000394991 ADAM30Q9UKF2 790 aa12.03□□□□□ -0.48
SNCA-205ENST00000394991 RBMY1BA6NDE4 496 aaKnown RBP12.02□□□□□ -0.49
SNCA-205ENST00000394991 RBMY1EA6NEQ0 496 aaKnown RBP12.02□□□□□ -0.49
SNCA-205ENST00000394991 ZNF780AO75290 641 aaPredicted RBP12.02□□□□□ -0.49
SNCA-205ENST00000394991 SC5DO75845 299 aa12.02□□□□□ -0.49
SNCA-205ENST00000394991 CD2P06729 351 aa12.02□□□□□ -0.49
SNCA-205ENST00000394991 RBMY1DP0C7P1 496 aaKnown RBP12.02□□□□□ -0.49
SNCA-205ENST00000394991 ZP3P21754 424 aa12.02□□□□□ -0.49
SNCA-205ENST00000394991 BDKRB2P30411 391 aa12.02□□□□□ -0.49
SNCA-205ENST00000394991 PLGLAQ15195 96 aa12.02□□□□□ -0.49
SNCA-205ENST00000394991 GTSCR1Q86UQ5 136 aa12.02□□□□□ -0.49
SNCA-205ENST00000394991 GHSRQ92847 366 aa12.02□□□□□ -0.49
SNCA-205ENST00000394991 SMIM19Q96E16 107 aa12.02□□□□□ -0.49
SNCA-205ENST00000394991 MRPS24Q96EL2 167 aaKnown RBP12.02□□□□□ -0.49
SNCA-205ENST00000394991 ZNF184Q99676 751 aaPredicted RBP12.02□□□□□ -0.49
SNCA-205ENST00000394991 VCX3BQ9H321 246 aa12.02□□□□□ -0.49
SNCA-205ENST00000394991 PLEKHA3Q9HB20 300 aa12.02□□□□□ -0.49
SNCA-205ENST00000394991 RANGRFQ9HD47 186 aaPredicted RBP12.02□□□□□ -0.49
SNCA-205ENST00000394991 RNF150Q9ULK6 438 aa12.02□□□□□ -0.49
SNCA-205ENST00000394991 PEX16Q9Y5Y5 336 aa12.02□□□□□ -0.49
SNCA-205ENST00000394991 PNMA8CA0A1B0GUJ8 204 aa12.01□□□□□ -0.49
SNCA-205ENST00000394991 UBE2QL1A1L167 161 aa12.01□□□□□ -0.49
SNCA-205ENST00000394991 ANKRD34BA5PLL1 514 aa12.01□□□□□ -0.49
SNCA-205ENST00000394991 PTGES3LE9PB15 166 aa12.01□□□□□ -0.49
SNCA-205ENST00000394991 YPEL1O60688 119 aa12.01□□□□□ -0.49
SNCA-205ENST00000394991 MAS1P04201 325 aa12.01□□□□□ -0.49
SNCA-205ENST00000394991 CSN3P07498 182 aa12.01□□□□□ -0.49
SNCA-205ENST00000394991 SYNJ2BPP57105 145 aa12.01□□□□□ -0.49
SNCA-205ENST00000394991 PPP3R1P63098 170 aa12.01□□□□□ -0.49
SNCA-205ENST00000394991 RNLSQ5VYX0 342 aa12.01□□□□□ -0.49
SNCA-205ENST00000394991 SIGIRRQ6IA17 410 aa12.01□□□□□ -0.49
SNCA-205ENST00000394991 GLDNQ6ZMI3 551 aaPredicted RBP12.01□□□□□ -0.49
SNCA-205ENST00000394991 OR13C5Q8NGS8 318 aa12.01□□□□□ -0.49
SNCA-205ENST00000394991 MRPL30Q8TCC3 161 aaKnown RBP12.01□□□□□ -0.49
SNCA-205ENST00000394991 YPEL2Q96QA6 119 aa12.01□□□□□ -0.49
SNCA-205ENST00000394991 CLCC1Q96S66 551 aa12.01□□□□□ -0.49
SNCA-205ENST00000394991 SHISA3A0PJX4 238 aa12□□□□□ -0.49
SNCA-205ENST00000394991 BRI3O95415 125 aa12□□□□□ -0.49
SNCA-205ENST00000394991 TFAP2AP05549 437 aa12□□□□□ -0.49
SNCA-205ENST00000394991 CT45A6P0DMU7 189 aa12□□□□□ -0.49
SNCA-205ENST00000394991 CT45A5P0DMU8 189 aa12□□□□□ -0.49
SNCA-205ENST00000394991 CT45A7P0DMV0 189 aa12□□□□□ -0.49
SNCA-205ENST00000394991 IGFBP3P17936 291 aaPredicted RBP12□□□□□ -0.49
SNCA-205ENST00000394991 HTD2P86397 168 aa12□□□□□ -0.49
SNCA-205ENST00000394991 RPL39P5Q59GN2 51 aa12□□□□□ -0.49
SNCA-205ENST00000394991 LY6G6FQ5SQ64 297 aa12□□□□□ -0.49
SNCA-205ENST00000394991 C6orf141Q5SZD1 244 aa12□□□□□ -0.49
SNCA-205ENST00000394991 DMKNQ6E0U4 476 aaPredicted RBP12□□□□□ -0.49
SNCA-205ENST00000394991 LCN12Q6JVE5 192 aa12□□□□□ -0.49
SNCA-205ENST00000394991 ZNF485Q8NCK3 441 aa12□□□□□ -0.49
SNCA-205ENST00000394991 MUL1Q969V5 352 aa12□□□□□ -0.49
SNCA-205ENST00000394991 SCN3BQ9NY72 215 aa12□□□□□ -0.49
SNCA-205ENST00000394991 H0YJW9 148 aa11.99□□□□□ -0.49
SNCA-205ENST00000394991 ST8SIA5O15466 376 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms