RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ZNF816Q0VGE8 651 aaPredicted RBP11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 PSG7Q13046 419 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 IGFL2Q6UWQ7 119 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 HEATR1Q9H583 2144 aaKnown RBP11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 PIEZO2Q9H5I5 2752 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 CEP295Q9C0D2 2601 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 TRBV23-1A0A0A0MS06 115 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 IGHV3-43A0A0B4J1X8 118 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 A0A1B0GU03 582 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 TM4SF5O14894 197 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 IGKV1D-33P01593 117 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 IGKV1-33P01594 117 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 IGHV3-43DP0DP04 118 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 NUBP1P53384 320 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 B2MP61769 119 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 AESQ08117 197 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 ELOBQ15370 118 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 GFI1BQ5VTD9 330 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 OR4C12Q96R67 309 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 DCTN5Q9BTE1 182 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 SEBOXQ9HB31 216 aaPredicted RBP11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 UFSP2Q9NUQ7 469 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 ACACAQ13085 2346 aa11.34□□□□□ -0.59
GTF2F1-201ENST00000394456 APC2O95996 2303 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 LOC102723971A0A1B0GUV8 181 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 DUXBA0A1W2PPF3 345 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 PPIHO43447 177 aaKnown RBP11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 KRASP01116 189 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 CEACAM1P13688 526 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 COL8A2P25067 703 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 G6PCP35575 357 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 OR3A1P47881 315 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 ERVK11-1P61568 191 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 PDZD11Q5EBL8 140 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 VWA1Q6PCB0 445 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 SPNS3Q6ZMD2 512 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 NANOS1Q8WY41 292 aaKnown RBP11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 IL22RA2Q969J5 263 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 TMPRSS5Q9H3S3 457 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 PLK3Q9H4B4 646 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 GSN-AS1Q9NRJ2 163 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 METTL1Q9UBP6 276 aaKnown RBP11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 UBE2L5PA0A1B0GUS4 154 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 IFNA5P01569 189 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 KIAA0141Q14154 515 aaPredicted RBP11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 PRAMEF6Q5VXH4 476 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 FAM90A2PQ658T7 463 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 KDF1Q8NAX2 398 aaPredicted RBP11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 RCC1LQ96I51 464 aaKnown RBP11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 ABHD14BQ96IU4 210 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 TAAR6Q96RI8 345 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 PKIBQ9C010 78 aa11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 RIMS4Q9H426 269 aaPredicted RBP11.33□□□□□ -0.6
GTF2F1-201ENST00000394456 DEFB108AA8MXU0 73 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 MLNRO43193 412 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 NDUFA6P56556 154 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 BRWD1-AS2P59051 145 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 ZNF674Q2M3X9 581 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 FAM214BQ7L5A3 538 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 FGFRL1Q8N441 504 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 C9orf106Q8NAJ2 232 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 RFESDQ8TAC1 157 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 GATAD1Q8WUU5 269 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 POM121Q96HA1 1249 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 RTL8AQ9BWD3 113 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 CLN8Q9UBY8 286 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 ZNF891A8MT65 544 aaPredicted RBP11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 AP4M1O00189 453 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 RAB2AP61019 212 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 FOXF2Q12947 444 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 LTC4SQ16873 150 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 ZNF787Q6DD87 383 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 GTF3AQ92664 365 aaKnown RBP11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 ZDHHC16Q969W1 377 aa11.32□□□□□ -0.6
GTF2F1-201ENST00000394456 IGHV3-13P01766 116 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 IGHV3-7P01780 117 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 HSPB1P04792 205 aaKnown RBP11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 FABP1P07148 127 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 PGA5P0DJD9 388 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 MMP9P14780 707 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 UBE2NP61088 152 aaKnown RBP11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 TLE4Q04727 773 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 TBC1D28Q2M2D7 210 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 IGF2-ASQ6U949 168 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 LILRB2Q8N423 598 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 RAB40CQ96S21 281 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 OR2D2Q9H210 308 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 MSL2Q9HCI7 577 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 C12orf77C9JDV5 145 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 HAND1O96004 215 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 C4orf17Q53FE4 359 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 ALKBH2Q6NS38 261 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 MRGPRDQ8TDS7 321 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 EDARADDQ8WWZ3 215 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 TVP23CQ96ET8 276 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 RBKSQ9H477 322 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 CADP27708 2225 aa11.31□□□□□ -0.6
GTF2F1-201ENST00000394456 LRP5LA4QPB2 252 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 C17orf98A8MV24 154 aa11.3□□□□□ -0.6
GTF2F1-201ENST00000394456 AQP7O14520 342 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms