RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CD1BP29016 333 aa15.2■□□□□ 0.02
PDLIM7-204ENST00000393546 HERPUD1Q15011 391 aa15.2■□□□□ 0.02
PDLIM7-204ENST00000393546 ODF3L1Q8IXM7 274 aa15.2■□□□□ 0.02
PDLIM7-204ENST00000393546 OR2T6Q8NHC8 308 aa15.2■□□□□ 0.02
PDLIM7-204ENST00000393546 S1PR3Q99500 378 aa15.2■□□□□ 0.02
PDLIM7-204ENST00000393546 PARP12Q9H0J9 701 aaKnown RBP15.2■□□□□ 0.02
PDLIM7-204ENST00000393546 RDH8Q9NYR8 311 aa15.2■□□□□ 0.02
PDLIM7-204ENST00000393546 TENM1Q9UKZ4 2725 aa15.2■□□□□ 0.02
PDLIM7-204ENST00000393546 TRBV6-7A0A0A0MS04 114 aa15.19■□□□□ 0.02
PDLIM7-204ENST00000393546 IGHV3-72A0A0B4J1Y9 119 aa15.19■□□□□ 0.02
PDLIM7-204ENST00000393546 SMIM31A0A1B0GVY4 71 aa15.19■□□□□ 0.02
PDLIM7-204ENST00000393546 SSX5O60225 188 aa15.19■□□□□ 0.02
PDLIM7-204ENST00000393546 IGKV1D-33P01593 117 aa15.19■□□□□ 0.02
PDLIM7-204ENST00000393546 IGKV1-33P01594 117 aa15.19■□□□□ 0.02
PDLIM7-204ENST00000393546 CTXN2P0C2S0 81 aa15.19■□□□□ 0.02
PDLIM7-204ENST00000393546 OR3A3P47888 321 aa15.19■□□□□ 0.02
PDLIM7-204ENST00000393546 HNF4GQ14541 408 aa15.19■□□□□ 0.02
PDLIM7-204ENST00000393546 TMEM69Q5SWH9 247 aa15.19■□□□□ 0.02
PDLIM7-204ENST00000393546 ZNF833PQ6ZTB9 187 aa15.19■□□□□ 0.02
PDLIM7-204ENST00000393546 OR2T10Q8NGZ9 312 aa15.19■□□□□ 0.02
PDLIM7-204ENST00000393546 GINS4Q9BRT9 223 aa15.19■□□□□ 0.02
PDLIM7-204ENST00000393546 TOLLIPQ9H0E2 274 aa15.19■□□□□ 0.02
PDLIM7-204ENST00000393546 IFI27L2Q9H2X8 130 aa15.19■□□□□ 0.02
PDLIM7-204ENST00000393546 DNHD1Q96M86 4753 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 IGKV1D-8A0A087WSZ0 117 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 SAA2-SAA4A0A096LPE2 208 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 M0QZK8 103 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 HAX1O00165 279 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 APOA1P02647 267 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 SAA2P0DJI9 122 aaPredicted RBP15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 SOX6P35712 828 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 BLCAPP62952 87 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 EBI3Q14213 229 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 SPCS2Q15005 226 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 FBLN7Q53RD9 439 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 FAM71F2Q6NXP2 309 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 SHISA2Q6UWI4 295 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 ABHD14BQ96IU4 210 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 AGMATQ9BSE5 352 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 ZNF221Q9UK13 617 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 RNF150Q9ULK6 438 aa15.18■□□□□ 0.02
PDLIM7-204ENST00000393546 HPGDSO60760 199 aa15.17■□□□□ 0.02
PDLIM7-204ENST00000393546 EIF4EP06730 217 aaKnown RBP15.17■□□□□ 0.02
PDLIM7-204ENST00000393546 CBX5P45973 191 aa15.17■□□□□ 0.02
PDLIM7-204ENST00000393546 PROK1P58294 105 aa15.17■□□□□ 0.02
PDLIM7-204ENST00000393546 TAS2R20P59543 309 aa15.17■□□□□ 0.02
PDLIM7-204ENST00000393546 ARSJQ5FYB0 599 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-204ENST00000393546 CNIH2Q6PI25 160 aa15.17■□□□□ 0.02
PDLIM7-204ENST00000393546 C11orf88Q6PI97 169 aa15.17■□□□□ 0.02
PDLIM7-204ENST00000393546 EAF1Q96JC9 268 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-204ENST00000393546 ZNF702PQ9H963 129 aa15.17■□□□□ 0.02
PDLIM7-204ENST00000393546 SIGLEC9Q9Y336 463 aa15.17■□□□□ 0.02
PDLIM7-204ENST00000393546 MOB4Q9Y3A3 225 aa15.17■□□□□ 0.02
PDLIM7-204ENST00000393546 FBN3Q75N90 2809 aa15.17■□□□□ 0.02
PDLIM7-204ENST00000393546 ZNF736B4DX44 427 aaPredicted RBP15.16■□□□□ 0.02
PDLIM7-204ENST00000393546 MOSP00540 346 aa15.16■□□□□ 0.02
PDLIM7-204ENST00000393546 GPR12P47775 334 aa15.16■□□□□ 0.02
PDLIM7-204ENST00000393546 LSAMPQ13449 338 aa15.16■□□□□ 0.02
PDLIM7-204ENST00000393546 HOGA1Q86XE5 327 aa15.16■□□□□ 0.02
PDLIM7-204ENST00000393546 Q8N2B8 174 aa15.16■□□□□ 0.02
PDLIM7-204ENST00000393546 BEST4Q8NFU0 473 aa15.16■□□□□ 0.02
PDLIM7-204ENST00000393546 NABP2Q9BQ15 211 aa15.16■□□□□ 0.02
PDLIM7-204ENST00000393546 ZNF251Q9BRH9 671 aa15.16■□□□□ 0.02
PDLIM7-204ENST00000393546 MRPL20Q9BYC9 149 aaKnown RBP15.16■□□□□ 0.02
PDLIM7-204ENST00000393546 ANXA10Q9UJ72 324 aa15.16■□□□□ 0.02
PDLIM7-204ENST00000393546 RBM7Q9Y580 266 aaKnown RBP15.16■□□□□ 0.02
PDLIM7-204ENST00000393546 ANK2Q01484 3957 aa15.16■□□□□ 0.02
PDLIM7-204ENST00000393546 FAM25AB3EWG3 89 aa15.15■□□□□ 0.02
PDLIM7-204ENST00000393546 FAM25CB3EWG5 89 aa15.15■□□□□ 0.02
PDLIM7-204ENST00000393546 FAM25GB3EWG6 89 aa15.15■□□□□ 0.02
PDLIM7-204ENST00000393546 OR8U9P0C7N5 309 aa15.15■□□□□ 0.02
PDLIM7-204ENST00000393546 PTHLHP12272 177 aa15.15■□□□□ 0.02
PDLIM7-204ENST00000393546 ELK1P19419 428 aa15.15■□□□□ 0.02
PDLIM7-204ENST00000393546 ABCA11PQ4W5N1 156 aa15.15■□□□□ 0.02
PDLIM7-204ENST00000393546 RPL39P5Q59GN2 51 aa15.15■□□□□ 0.02
PDLIM7-204ENST00000393546 GVQW1Q8N7I0 195 aa15.15■□□□□ 0.02
PDLIM7-204ENST00000393546 OR8U1Q8NH10 309 aa15.15■□□□□ 0.02
PDLIM7-204ENST00000393546 WFDC12Q8WWY7 111 aa15.15■□□□□ 0.02
PDLIM7-204ENST00000393546 MRPS7Q9Y2R9 242 aaKnown RBP15.15■□□□□ 0.02
PDLIM7-204ENST00000393546 NCBP2LA6PVI3 153 aaKnown RBP15.14■□□□□ 0.01
PDLIM7-204ENST00000393546 FGF16O43320 207 aa15.14■□□□□ 0.01
PDLIM7-204ENST00000393546 PRSS3P35030 304 aa15.14■□□□□ 0.01
PDLIM7-204ENST00000393546 ARPC4P59998 168 aa15.14■□□□□ 0.01
PDLIM7-204ENST00000393546 H1FOOQ8IZA3 346 aaPredicted RBP15.14■□□□□ 0.01
PDLIM7-204ENST00000393546 Q8N6K4 173 aa15.14■□□□□ 0.01
PDLIM7-204ENST00000393546 ISOC1Q96CN7 298 aa15.14■□□□□ 0.01
PDLIM7-204ENST00000393546 GAB2Q9UQC2 676 aa15.14■□□□□ 0.01
PDLIM7-204ENST00000393546 CEPT1Q9Y6K0 416 aa15.14■□□□□ 0.01
PDLIM7-204ENST00000393546 PEX14O75381 377 aa15.13■□□□□ 0.01
PDLIM7-204ENST00000393546 AMY1AP04745 511 aa15.13■□□□□ 0.01
PDLIM7-204ENST00000393546 AMY2AP04746 511 aa15.13■□□□□ 0.01
PDLIM7-204ENST00000393546 CT45A6P0DMU7 189 aa15.13■□□□□ 0.01
PDLIM7-204ENST00000393546 CT45A5P0DMU8 189 aa15.13■□□□□ 0.01
PDLIM7-204ENST00000393546 CT45A7P0DMV0 189 aa15.13■□□□□ 0.01
PDLIM7-204ENST00000393546 C9orf152Q5JTZ5 239 aa15.13■□□□□ 0.01
PDLIM7-204ENST00000393546 Q6ZS46 218 aa15.13■□□□□ 0.01
PDLIM7-204ENST00000393546 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-204ENST00000393546 OR8H1Q8NGG4 311 aa15.13■□□□□ 0.01
PDLIM7-204ENST00000393546 DYNC2LI1Q8TCX1 351 aa15.13■□□□□ 0.01
PDLIM7-204ENST00000393546 IFT46Q9NQC8 304 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms