RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 LIN7CQ9NUP9 197 aaKnown RBP7.14□□□□□ -1.27
TDP1-203ENST00000393454 GFOD1Q9NXC2 390 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 MBD2Q9UBB5 411 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 KAAG1Q9UBP8 84 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 TMED3Q9Y3Q3 217 aa7.14□□□□□ -1.27
TDP1-203ENST00000393454 A0A1W2PPE3 182 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 FCN3O75636 299 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 B3GALNT1O75752 331 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 IGHV2-70P01814 119 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 CCL3L1P16619 93 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 CATR1Q13166 79 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 RAB32Q13637 225 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 OR2B11Q5JQS5 317 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 TMEM200BQ69YZ2 307 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 TMUB2Q71RG4 321 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 INO80EQ8NBZ0 244 aaPredicted RBP7.13□□□□□ -1.27
TDP1-203ENST00000393454 TCTEX1D2Q8WW35 142 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 ZNF714Q96N38 554 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 GON7Q9BXV9 100 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 SDHAF2Q9NX18 166 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 TAS2R3Q9NYW6 316 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 LPAR3Q9UBY5 353 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 PAIP2BQ9ULR5 123 aaKnown RBP7.13□□□□□ -1.27
TDP1-203ENST00000393454 LSM5Q9Y4Y9 91 aaKnown RBP7.13□□□□□ -1.27
TDP1-203ENST00000393454 DOPEY1Q5JWR5 2465 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 USP9XQ93008 2570 aaPredicted RBP7.13□□□□□ -1.27
TDP1-203ENST00000393454 KCNAB3O43448 404 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 MMP23AO75900 390 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 CLDN1O95832 211 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 RLN2P04090 185 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 PET100P0DJ07 73 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 NUP62P37198 522 aaPredicted RBP7.13□□□□□ -1.27
TDP1-203ENST00000393454 GNG10P50151 68 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 ZNF134P52741 427 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 ERVFRD-1P60508 538 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 SMCO1Q147U7 214 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 OPCMLQ14982 345 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 UTF1Q5T230 341 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 THOC7Q6I9Y2 204 aaKnown RBP7.13□□□□□ -1.27
TDP1-203ENST00000393454 OR8H1Q8NGG4 311 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 C5orf30Q96GV9 206 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 AGMATQ9BSE5 352 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 ABHD14AQ9BUJ0 271 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 ARL6Q9H0F7 186 aa7.13□□□□□ -1.27
TDP1-203ENST00000393454 USF3Q68DE3 2245 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 PIGBOS1A0A0B4J2F0 54 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 SLC31A2O15432 143 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 NDUFS7O75251 213 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 RPA2P15927 270 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 EPHA1P21709 976 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 S100A11P31949 105 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 LPAR6P43657 344 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 RAB7AP51149 207 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 RPL30P62888 115 aaKnown RBP7.12□□□□□ -1.27
TDP1-203ENST00000393454 MRPS11P82912 194 aaKnown RBP7.12□□□□□ -1.27
TDP1-203ENST00000393454 ZNF816Q0VGE8 651 aaPredicted RBP7.12□□□□□ -1.27
TDP1-203ENST00000393454 IL15RAQ13261 267 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 PRSS54Q6PEW0 395 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 TMEM65Q6PI78 240 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 OR8B3Q8NGG8 313 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 OR52M1Q8NGK5 317 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 IL22RA2Q969J5 263 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 OR8B2Q96RD0 313 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 HSD17B10Q99714 261 aaKnown RBP7.12□□□□□ -1.27
TDP1-203ENST00000393454 SPIN2AQ99865 258 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 SPIN2BQ9BPZ2 258 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 RNF126Q9BV68 326 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 NARFLQ9H6Q4 476 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 CHODLQ9H9P2 273 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 OR5AC2Q9NZP5 309 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 MIOXQ9UGB7 285 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 TNFSF18Q9UNG2 199 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 KLF2Q9Y5W3 355 aaPredicted RBP7.12□□□□□ -1.27
TDP1-203ENST00000393454 DOCK11Q5JSL3 2073 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 DUXBA0A1W2PPF3 345 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 H0YIZ8 118 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 M0R1X1 148 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 WNT2P09544 360 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 VDAC1P21796 283 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 AKR1C2P52895 323 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 LINC00205P59089 165 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 MSMO1Q15800 293 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 TMEM30BQ3MIR4 351 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 RPL39P5Q59GN2 51 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 CT45A1Q5HYN5 189 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 ZNF66Q6ZN08 573 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 ACOT7LQ6ZUV0 252 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 SPAG16Q8N0X2 631 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 LYG1Q8N1E2 194 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 OR1S1Q8NH92 325 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 CT45A3Q8NHU0 189 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 RRNAD1Q96FB5 475 aaKnown RBP7.12□□□□□ -1.27
TDP1-203ENST00000393454 IFI27L2Q9H2X8 130 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 LINC00574Q9H8X3 128 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 ZC4H2Q9NQZ6 224 aa7.12□□□□□ -1.27
TDP1-203ENST00000393454 RPUSD1Q9UJJ7 312 aaKnown RBP7.12□□□□□ -1.27
TDP1-203ENST00000393454 DCHS2Q6V1P9 2916 aa7.11□□□□□ -1.27
TDP1-203ENST00000393454 A0A0D9SG52 128 aa7.11□□□□□ -1.27
TDP1-203ENST00000393454 LINC00473A8K010 186 aa7.11□□□□□ -1.27
TDP1-203ENST00000393454 C17orf98A8MV24 154 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms