RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 PLA2G2EQ9NZK7 142 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 RNF7Q9UBF6 113 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 CACNG5Q9UF02 275 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 JPT1Q9UK76 154 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 K7N7A8 449 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 IGKV1-5P01602 117 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 EPHA1P21709 976 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 PAX9P55771 341 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 FAM209AQ5JX71 171 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 GNPNAT1Q96EK6 184 aaPredicted RBP19.3■□□□□ 0.68
VPS16-201ENST00000380443 HSD17B10Q99714 261 aaKnown RBP19.3■□□□□ 0.68
VPS16-201ENST00000380443 CACFD1Q9UGQ2 172 aa19.3■□□□□ 0.68
VPS16-201ENST00000380443 ARID1AO14497 2285 aa19.29■□□□□ 0.68
VPS16-201ENST00000380443 TOR1AO14656 332 aa19.29■□□□□ 0.68
VPS16-201ENST00000380443 CCKARP32238 428 aa19.29■□□□□ 0.68
VPS16-201ENST00000380443 FGFRL1Q8N441 504 aa19.29■□□□□ 0.68
VPS16-201ENST00000380443 OR6C3Q9NZP0 311 aa19.29■□□□□ 0.68
VPS16-201ENST00000380443 CARHSP1Q9Y2V2 147 aaKnown RBP19.29■□□□□ 0.68
VPS16-201ENST00000380443 PRR14LQ5THK1 2151 aa19.29■□□□□ 0.68
VPS16-201ENST00000380443 ABCD4O14678 606 aa19.28■□□□□ 0.68
VPS16-201ENST00000380443 TXNL1O43396 289 aa19.28■□□□□ 0.68
VPS16-201ENST00000380443 SYNGR2O43760 224 aa19.28■□□□□ 0.68
VPS16-201ENST00000380443 TMEM50AO95807 157 aa19.28■□□□□ 0.68
VPS16-201ENST00000380443 SULT1A1P50225 295 aa19.28■□□□□ 0.68
VPS16-201ENST00000380443 TNFAIP6P98066 277 aaPredicted RBP19.28■□□□□ 0.68
VPS16-201ENST00000380443 SVBPQ8N300 66 aa19.28■□□□□ 0.68
VPS16-201ENST00000380443 ZNF561Q8N587 486 aa19.28■□□□□ 0.68
VPS16-201ENST00000380443 BOLLQ8N9W6 283 aaKnown RBP19.28■□□□□ 0.68
VPS16-201ENST00000380443 OR5C1Q8NGR4 320 aa19.28■□□□□ 0.68
VPS16-201ENST00000380443 LRRC46Q96FV0 321 aa19.28■□□□□ 0.68
VPS16-201ENST00000380443 SEC11CQ9BY50 192 aa19.28■□□□□ 0.68
VPS16-201ENST00000380443 UQCC1Q9NVA1 299 aa19.28■□□□□ 0.68
VPS16-201ENST00000380443 TMA7Q9Y2S6 64 aaKnown RBP19.28■□□□□ 0.68
VPS16-201ENST00000380443 CHD3Q12873 2000 aaKnown RBP19.28■□□□□ 0.68
VPS16-201ENST00000380443 YPEL1O60688 119 aa19.28■□□□□ 0.68
VPS16-201ENST00000380443 Q6ZRM9 215 aa19.28■□□□□ 0.68
VPS16-201ENST00000380443 CD300LFQ8TDQ1 290 aa19.28■□□□□ 0.68
VPS16-201ENST00000380443 YPEL2Q96QA6 119 aa19.28■□□□□ 0.68
VPS16-201ENST00000380443 TREM1Q9NP99 234 aa19.28■□□□□ 0.68
VPS16-201ENST00000380443 VSTM5A8MXK1 200 aa19.27■□□□□ 0.68
VPS16-201ENST00000380443 ITGB1BP1O14713 200 aa19.27■□□□□ 0.68
VPS16-201ENST00000380443 IGHV1-46P01743 117 aa19.27■□□□□ 0.68
VPS16-201ENST00000380443 PPP1CCP36873 323 aaKnown RBP19.27■□□□□ 0.68
VPS16-201ENST00000380443 CAMLGP49069 296 aa19.27■□□□□ 0.68
VPS16-201ENST00000380443 DYNLT3P51808 116 aa19.27■□□□□ 0.68
VPS16-201ENST00000380443 LY6DQ14210 128 aa19.27■□□□□ 0.68
VPS16-201ENST00000380443 SNRNP40Q96DI7 357 aaKnown RBP19.27■□□□□ 0.68
VPS16-201ENST00000380443 C14orf79Q96F83 325 aa19.27■□□□□ 0.68
VPS16-201ENST00000380443 SDSLQ96GA7 329 aa19.27■□□□□ 0.68
VPS16-201ENST00000380443 ATP5SQ99766 215 aa19.27■□□□□ 0.68
VPS16-201ENST00000380443 RNF150Q9ULK6 438 aa19.27■□□□□ 0.68
VPS16-201ENST00000380443 F2RL2O00254 374 aa19.26■□□□□ 0.67
VPS16-201ENST00000380443 TSPAN15O95858 294 aa19.26■□□□□ 0.67
VPS16-201ENST00000380443 SSTR5P35346 364 aa19.26■□□□□ 0.67
VPS16-201ENST00000380443 DVL1P1P54792 670 aaPredicted RBP19.26■□□□□ 0.67
VPS16-201ENST00000380443 DEFA5Q01523 94 aa19.26■□□□□ 0.67
VPS16-201ENST00000380443 MIDNQ504T8 468 aa19.26■□□□□ 0.67
VPS16-201ENST00000380443 HSD17B11Q8NBQ5 300 aa19.26■□□□□ 0.67
VPS16-201ENST00000380443 LFNGQ8NES3 379 aa19.26■□□□□ 0.67
VPS16-201ENST00000380443 FAM234AQ9H0X4 552 aa19.26■□□□□ 0.67
VPS16-201ENST00000380443 RNASEK-C17orf49H0YIS7 233 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 CLDN1O95832 211 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 CD5P06127 495 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 EDDM3AQ14507 147 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 CLINT1Q14677 625 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 ODF3L1Q8IXM7 274 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 GCM1Q9NP62 436 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 NGBQ9NPG2 151 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 C19orf12Q9NSK7 152 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 F8W036 122 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 PRH1P02810 166 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 CD55P08174 381 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 OMGP23515 440 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 HOXA4Q00056 320 aaPredicted RBP19.25■□□□□ 0.67
VPS16-201ENST00000380443 BTN1A1Q13410 526 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 TMEM30BQ3MIR4 351 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 TCTEX1D2Q8WW35 142 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 AGMATQ9BSE5 352 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 GAB2Q9UQC2 676 aa19.25■□□□□ 0.67
VPS16-201ENST00000380443 KIAA2026Q5HYC2 2103 aa19.24■□□□□ 0.67
VPS16-201ENST00000380443 RAB29O14966 203 aa19.24■□□□□ 0.67
VPS16-201ENST00000380443 TFF1P04155 84 aa19.24■□□□□ 0.67
VPS16-201ENST00000380443 P0C879 139 aa19.24■□□□□ 0.67
VPS16-201ENST00000380443 IRF2P14316 349 aa19.24■□□□□ 0.67
VPS16-201ENST00000380443 TNFRSF1AP19438 455 aa19.24■□□□□ 0.67
VPS16-201ENST00000380443 ATP6V0CP27449 155 aa19.24■□□□□ 0.67
VPS16-201ENST00000380443 C22orf34Q6ZV56 151 aa19.24■□□□□ 0.67
VPS16-201ENST00000380443 TPRX1Q8N7U7 411 aa19.24■□□□□ 0.67
VPS16-201ENST00000380443 CST7O76096 145 aa19.23■□□□□ 0.67
VPS16-201ENST00000380443 CLDN14O95500 239 aa19.23■□□□□ 0.67
VPS16-201ENST00000380443 MUC1P15941 1255 aaPredicted RBP19.23■□□□□ 0.67
VPS16-201ENST00000380443 ARHGDIBP52566 201 aa19.23■□□□□ 0.67
VPS16-201ENST00000380443 RPL30P62888 115 aaKnown RBP19.23■□□□□ 0.67
VPS16-201ENST00000380443 DPPA3Q6W0C5 159 aa19.23■□□□□ 0.67
VPS16-201ENST00000380443 OR2G3Q8NGZ4 309 aa19.23■□□□□ 0.67
VPS16-201ENST00000380443 NKX6-2Q9C056 277 aaPredicted RBP19.23■□□□□ 0.67
VPS16-201ENST00000380443 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.23■□□□□ 0.67
VPS16-201ENST00000380443 PSENENQ9NZ42 101 aa19.23■□□□□ 0.67
VPS16-201ENST00000380443 IFNA5P01569 189 aa19.23■□□□□ 0.67
VPS16-201ENST00000380443 HBG1P69891 147 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms