RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 TM4SF19Q96DZ7 209 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 CLEC5AQ9NY25 188 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 M0R3E3 92 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 DXOO77932 396 aaKnown RBP12.63□□□□□ -0.39
PRDM16-203ENST00000378391 SERF2P84101 59 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 MESP2Q0VG99 397 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 FAM219AQ8IW50 185 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 TMEM52Q8NDY8 209 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 HSD17B10Q99714 261 aaKnown RBP12.63□□□□□ -0.39
PRDM16-203ENST00000378391 RPL36A-HNRNPH2H7BZ11 118 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 NGFRP08138 427 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 IL9P15248 144 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 MUC1P15941 1255 aaPredicted RBP12.63□□□□□ -0.39
PRDM16-203ENST00000378391 C2orf68Q2NKX9 166 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 FDX2Q6P4F2 183 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 OR2H1Q9GZK4 316 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 MPTX1A8MV57 137 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 H7C2G1 150 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 PAGE4O60829 102 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 PMELP40967 661 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 TMEM50BP56557 158 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 MRGPRFQ96AM1 343 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 C1orf43Q9BWL3 253 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 HSF4Q9ULV5 492 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 MEX3AA1L020 520 aaKnown RBP12.62□□□□□ -0.39
PRDM16-203ENST00000378391 PITX3O75364 302 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 MOSPD3O75425 235 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 CDX1P47902 265 aaPredicted RBP12.62□□□□□ -0.39
PRDM16-203ENST00000378391 GNB2P62879 340 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 ZNF415Q09FC8 603 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 LINC00596Q86U02 117 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 FAM117AQ9C073 453 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 GLRX2Q9NS18 164 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 THYN1Q9P016 225 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 BCL3P20749 454 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 SRSF5Q13243 272 aaKnown RBP12.62□□□□□ -0.39
PRDM16-203ENST00000378391 ANKRD55Q3KP44 614 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 DNLZQ5SXM8 178 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 ZFAND6Q6FIF0 208 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 CLEC2AQ6UVW9 174 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 PDPNQ86YL7 162 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 WNT2BQ93097 391 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 MYOFQ9NZM1 2061 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 FAM186AA6NE01 2351 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 FOXS1O43638 330 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 HOXA6P31267 233 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 LYZL6O75951 148 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 TNFAIP6P98066 277 aaPredicted RBP12.62□□□□□ -0.39
PRDM16-203ENST00000378391 PSG5Q15238 335 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 GPR132Q9UNW8 380 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 DTX4Q9Y2E6 619 aa12.62□□□□□ -0.39
PRDM16-203ENST00000378391 LIPFP07098 398 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 PIGYQ3MUY2 71 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 SRD5A3Q9H8P0 318 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 M0QZ24 198 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 ZNF205O95201 554 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 CSN3P07498 182 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 MMP9P14780 707 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 RCC1P18754 421 aaPredicted RBP12.61□□□□□ -0.39
PRDM16-203ENST00000378391 OR4P4Q8NGL7 312 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 RGP1Q92546 391 aaPredicted RBP12.61□□□□□ -0.39
PRDM16-203ENST00000378391 AICDAQ9GZX7 198 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 TMEM38BQ9NVV0 291 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 TMEM265A0A087WTH1 108 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 RPS11P62280 158 aaKnown RBP eCLIP12.61□□□□□ -0.39
PRDM16-203ENST00000378391 LDLRAD3Q86YD5 345 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 BOD1L2Q8IYS8 172 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 AUP1Q9Y679 476 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 FNDC1Q4ZHG4 1894 aaPredicted RBP12.61□□□□□ -0.39
PRDM16-203ENST00000378391 A0A0U1RQV5 110 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 MELTFP08582 738 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 FAM3BP58499 235 aaPredicted RBP12.61□□□□□ -0.39
PRDM16-203ENST00000378391 TNFRSF9Q07011 255 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 ZNF260Q3ZCT1 412 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 C9orf40Q8IXQ3 194 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 NEU1Q99519 415 aa12.61□□□□□ -0.39
PRDM16-203ENST00000378391 TRGV8A0A0C4DH27 118 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 CDIPTO14735 213 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 ORM2P19652 201 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 KIR2DL1P43626 348 aaPredicted RBP12.6□□□□□ -0.39
PRDM16-203ENST00000378391 C1orf100Q5SVJ3 147 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 IGKV1D-16P01601 117 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 BCL2P10415 239 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 MC5RP33032 325 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 GPR35Q9HC97 309 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 DNASE2O00115 360 aaPredicted RBP12.6□□□□□ -0.39
PRDM16-203ENST00000378391 IFI6P09912 130 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 SMIM13P0DJ93 91 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 TMEM95Q3KNT9 176 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 FZR1Q9UM11 496 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 WIPI2Q9Y4P8 454 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 UPK3AO75631 287 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 CXorf1O96002 111 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 BRS3P32247 399 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 ZNF519Q8TB69 540 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 SPANXA1Q9NS26 97 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 SPCS1Q9Y6A9 102 aa12.6□□□□□ -0.39
PRDM16-203ENST00000378391 C3orf80F5H4A9 247 aa12.59□□□□□ -0.39
PRDM16-203ENST00000378391 MT-CO3P00414 261 aa12.59□□□□□ -0.39
PRDM16-203ENST00000378391 GAGE2BQ13066 116 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms