RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 FAM157CP0CG43 387 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 CCL4P13236 92 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 HFEQ30201 348 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 ALKBH6Q3KRA9 238 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 SLC23A3Q6PIS1 610 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 SAXO1Q8IYX7 474 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 SGMS2Q8NHU3 365 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 DYRK2Q92630 601 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 Q96M66 194 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 NPVFQ9HCQ7 196 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 PIPOXQ9P0Z9 390 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 LOC390937A0A1W2PQ73 354 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 IL11P20809 199 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 CD1BP29016 333 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 DHRS11Q6UWP2 260 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 ZNF596Q8TC21 504 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 SSMEM1Q8WWF3 244 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 FBXO17Q96EF6 278 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 OR2V2Q96R30 315 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 IL19Q9UHD0 177 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 CEP192Q8TEP8 1941 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 ZNF106Q9H2Y7 1883 aaKnown RBP7.26□□□□□ -1.25
VPS36-201ENST00000378060 IGSF23A1L1A6 192 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 SNURFLB1AK76 121 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 TMEM229AB2RXF0 380 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 K7ESF4 209 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 M0R2Z0 102 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 SYNGR1O43759 233 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 RECKO95980 971 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 OR5AL1P0C617 328 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 G6PCP35575 357 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 CDX1P47902 265 aaPredicted RBP7.26□□□□□ -1.25
VPS36-201ENST00000378060 C16orf82Q7Z2V1 217 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 SLC22A18ASQ8N1D0 253 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 OR1L6Q8NGR2 347 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 AMMECR1Q9Y4X0 333 aaPredicted RBP7.26□□□□□ -1.25
VPS36-201ENST00000378060 RTTNQ86VV8 2226 aa7.26□□□□□ -1.25
VPS36-201ENST00000378060 SCN2AQ99250 2005 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 TRAV34A0A0B4J273 112 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 C3orf80F5H4A9 247 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 LMX1BO60663 402 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 SRSF10O75494 262 aaKnown RBP7.25□□□□□ -1.25
VPS36-201ENST00000378060 HPRT1P00492 218 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 TRGC2P03986 189 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 HIST1H1EP10412 219 aaKnown RBP7.25□□□□□ -1.25
VPS36-201ENST00000378060 EGR4Q05215 589 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 DHRS13Q6UX07 377 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 CACNA1DQ01668 2161 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 CNOT1A5YKK6 2376 aaKnown RBP7.25□□□□□ -1.25
VPS36-201ENST00000378060 GPR179Q6PRD1 2367 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 ZNF785A8K8V0 405 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 IGKV3-11P04433 115 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 ACAA1P09110 424 aaPredicted RBP7.25□□□□□ -1.25
VPS36-201ENST00000378060 ZNF708P17019 499 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 S100A4P26447 101 aaKnown RBP7.25□□□□□ -1.25
VPS36-201ENST00000378060 BRS3P32247 399 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 CEACAM3P40198 252 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 CXorf66Q5JRM2 361 aaPredicted RBP7.25□□□□□ -1.25
VPS36-201ENST00000378060 OR8G5Q8NG78 346 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 OR2M7Q8NG81 312 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 OR1L8Q8NGR8 309 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 TAF15Q92804 592 aaKnown RBP eCLIP7.25□□□□□ -1.25
VPS36-201ENST00000378060 HIST1H2BAQ96A08 127 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 MARS2Q96GW9 593 aaKnown RBP7.25□□□□□ -1.25
VPS36-201ENST00000378060 METTL1Q9UBP6 276 aaKnown RBP7.25□□□□□ -1.25
VPS36-201ENST00000378060 CACNA1GO43497 2377 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 B4E171 279 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 ISLRO14498 428 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 FAM87AP0C7U9 286 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 TSPAN7P41732 249 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 MAGEA5P43359 124 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 RND3P61587 244 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 SLC25A40Q8TBP6 338 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 RSG1Q9BU20 258 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 COL25A1Q9BXS0 654 aaPredicted RBP7.25□□□□□ -1.25
VPS36-201ENST00000378060 PKIBQ9C010 78 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 ZNF665Q9H7R5 613 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 SRD5A3Q9H8P0 318 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 GOLT1BQ9Y3E0 138 aa7.25□□□□□ -1.25
VPS36-201ENST00000378060 TDRD6O60522 2096 aaKnown RBP7.25□□□□□ -1.25
VPS36-201ENST00000378060 SMPD2O60906 423 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 COX5BP10606 129 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 ORM2P19652 201 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 IER3P46695 156 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 RIGQ13278 110 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 LINC00114Q6XXX2 140 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 WDFY1Q8IWB7 410 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 BLNKQ8WV28 456 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 PERPQ96FX8 193 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 MEGF10Q96KG7 1140 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 MSL2Q9HCI7 577 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 DOK5Q9P104 306 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 RNF7Q9UBF6 113 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 THADAQ6YHU6 1953 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 MEX3AA1L020 520 aaKnown RBP7.24□□□□□ -1.25
VPS36-201ENST00000378060 NEURL1O76050 574 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 P01737 135 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 RPLP1P05386 114 aaKnown RBP7.24□□□□□ -1.25
VPS36-201ENST00000378060 NAT2P11245 290 aa7.24□□□□□ -1.25
VPS36-201ENST00000378060 TCL1AP56279 114 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms