RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 CACNA1DQ01668 2161 aa15.21■□□□□ 0.03
GNE-201ENST00000377902 TRAPPC2LQ9UL33 140 aa15.21■□□□□ 0.03
GNE-201ENST00000377902 TNRC6AQ8NDV7 1962 aaKnown RBP15.21■□□□□ 0.03
GNE-201ENST00000377902 PATE3B3GLJ2 98 aa15.21■□□□□ 0.02
GNE-201ENST00000377902 SELEP16581 610 aa15.21■□□□□ 0.02
GNE-201ENST00000377902 WNT5AP41221 380 aa15.21■□□□□ 0.02
GNE-201ENST00000377902 PMP22Q01453 160 aa15.21■□□□□ 0.02
GNE-201ENST00000377902 CYP2G1PQ6ZSU1 146 aa15.21■□□□□ 0.02
GNE-201ENST00000377902 OR4F5Q8NH21 305 aa15.21■□□□□ 0.02
GNE-201ENST00000377902 OR5R1Q8NH85 324 aa15.21■□□□□ 0.02
GNE-201ENST00000377902 POM121L2Q96KW2 1035 aa15.21■□□□□ 0.02
GNE-201ENST00000377902 OR4F4Q96R69 305 aa15.21■□□□□ 0.02
GNE-201ENST00000377902 RIMS4Q9H426 269 aaPredicted RBP15.21■□□□□ 0.02
GNE-201ENST00000377902 TMEM9BQ9NQ34 198 aa15.21■□□□□ 0.02
GNE-201ENST00000377902 CLN8Q9UBY8 286 aa15.21■□□□□ 0.02
GNE-201ENST00000377902 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.2■□□□□ 0.02
GNE-201ENST00000377902 SLC31A2O15432 143 aa15.2■□□□□ 0.02
GNE-201ENST00000377902 KRASP01116 189 aa15.2■□□□□ 0.02
GNE-201ENST00000377902 CEACAM6P40199 344 aa15.2■□□□□ 0.02
GNE-201ENST00000377902 C3AR1Q16581 482 aa15.2■□□□□ 0.02
GNE-201ENST00000377902 SPINK9Q5DT21 86 aa15.2■□□□□ 0.02
GNE-201ENST00000377902 DRAM1Q8N682 238 aa15.2■□□□□ 0.02
GNE-201ENST00000377902 FUT9Q9Y231 359 aa15.2■□□□□ 0.02
GNE-201ENST00000377902 USF3Q68DE3 2245 aa15.2■□□□□ 0.02
GNE-201ENST00000377902 ASPMQ8IZT6 3477 aa15.2■□□□□ 0.02
GNE-201ENST00000377902 TNRC6BQ9UPQ9 1833 aaKnown RBP15.2■□□□□ 0.02
GNE-201ENST00000377902 KBTBD11O94819 623 aa15.2■□□□□ 0.02
GNE-201ENST00000377902 IL18BPO95998 194 aa15.2■□□□□ 0.02
GNE-201ENST00000377902 GNB2P62879 340 aa15.2■□□□□ 0.02
GNE-201ENST00000377902 Q6P435 159 aa15.2■□□□□ 0.02
GNE-201ENST00000377902 PCSK5Q92824 1860 aa15.2■□□□□ 0.02
GNE-201ENST00000377902 TRBV6-6A0A0A6YYG2 114 aa15.19■□□□□ 0.02
GNE-201ENST00000377902 A8MWP6 167 aa15.19■□□□□ 0.02
GNE-201ENST00000377902 H7BYZ3 331 aa15.19■□□□□ 0.02
GNE-201ENST00000377902 IFNA1P01562 189 aa15.19■□□□□ 0.02
GNE-201ENST00000377902 EGR1P18146 543 aa15.19■□□□□ 0.02
GNE-201ENST00000377902 G6PCP35575 357 aa15.19■□□□□ 0.02
GNE-201ENST00000377902 UBE2ZQ9H832 354 aaPredicted RBP15.19■□□□□ 0.02
GNE-201ENST00000377902 ANKRD30BLA7E2S9 258 aa15.19■□□□□ 0.02
GNE-201ENST00000377902 PPP5D1E7EU14 171 aa15.19■□□□□ 0.02
GNE-201ENST00000377902 TGOLN2O43493 480 aa15.19■□□□□ 0.02
GNE-201ENST00000377902 SS18L1O75177 396 aaPredicted RBP15.19■□□□□ 0.02
GNE-201ENST00000377902 CYB561P49447 251 aa15.19■□□□□ 0.02
GNE-201ENST00000377902 CEBPDP49716 269 aaPredicted RBP15.19■□□□□ 0.02
GNE-201ENST00000377902 LINC00205P59089 165 aa15.19■□□□□ 0.02
GNE-201ENST00000377902 SSTP61278 116 aa15.19■□□□□ 0.02
GNE-201ENST00000377902 TFF3Q07654 80 aa15.19■□□□□ 0.02
GNE-201ENST00000377902 ZNF816Q0VGE8 651 aaPredicted RBP15.19■□□□□ 0.02
GNE-201ENST00000377902 HLA-CQ95604 372 aa15.19■□□□□ 0.02
GNE-201ENST00000377902 TMEM45BQ96B21 275 aa15.19■□□□□ 0.02
GNE-201ENST00000377902 PYGO2Q9BRQ0 406 aa15.19■□□□□ 0.02
GNE-201ENST00000377902 DVL1O14640 695 aa15.18■□□□□ 0.02
GNE-201ENST00000377902 OR2H2O95918 312 aa15.18■□□□□ 0.02
GNE-201ENST00000377902 IFNA10P01566 189 aa15.18■□□□□ 0.02
GNE-201ENST00000377902 IDH3GP51553 393 aaPredicted RBP15.18■□□□□ 0.02
GNE-201ENST00000377902 USF2Q15853 346 aaPredicted RBP15.18■□□□□ 0.02
GNE-201ENST00000377902 ZNF573Q86YE8 665 aa15.18■□□□□ 0.02
GNE-201ENST00000377902 ZDHHC16Q969W1 377 aa15.18■□□□□ 0.02
GNE-201ENST00000377902 PINX1Q96BK5 328 aaKnown RBP15.18■□□□□ 0.02
GNE-201ENST00000377902 FAM166BA8MTA8 275 aa15.18■□□□□ 0.02
GNE-201ENST00000377902 C1QTNF9BB2RNN3 333 aa15.18■□□□□ 0.02
GNE-201ENST00000377902 PAX1P15863 534 aa15.18■□□□□ 0.02
GNE-201ENST00000377902 NUBP1P53384 320 aa15.18■□□□□ 0.02
GNE-201ENST00000377902 FAM3BP58499 235 aaPredicted RBP15.18■□□□□ 0.02
GNE-201ENST00000377902 TAS2R60P59551 318 aa15.18■□□□□ 0.02
GNE-201ENST00000377902 GNG3P63215 75 aa15.18■□□□□ 0.02
GNE-201ENST00000377902 DNLZQ5SXM8 178 aa15.18■□□□□ 0.02
GNE-201ENST00000377902 WDR86Q86TI4 376 aa15.18■□□□□ 0.02
GNE-201ENST00000377902 ZNF808Q8N4W9 903 aaPredicted RBP15.18■□□□□ 0.02
GNE-201ENST00000377902 OR10G9Q8NGN4 311 aa15.18■□□□□ 0.02
GNE-201ENST00000377902 OR10G7Q8NGN6 311 aa15.18■□□□□ 0.02
GNE-201ENST00000377902 OR51I2Q9H344 312 aa15.18■□□□□ 0.02
GNE-201ENST00000377902 AHCTF1Q8WYP5 2266 aa15.17■□□□□ 0.02
GNE-201ENST00000377902 PAGE4O60829 102 aa15.17■□□□□ 0.02
GNE-201ENST00000377902 FGF7P21781 194 aa15.17■□□□□ 0.02
GNE-201ENST00000377902 PSMB3P49720 205 aa15.17■□□□□ 0.02
GNE-201ENST00000377902 LHX2P50458 406 aa15.17■□□□□ 0.02
GNE-201ENST00000377902 TNFRSF9Q07011 255 aa15.17■□□□□ 0.02
GNE-201ENST00000377902 OR5B12Q96R08 314 aa15.17■□□□□ 0.02
GNE-201ENST00000377902 AGMATQ9BSE5 352 aa15.17■□□□□ 0.02
GNE-201ENST00000377902 A0A1B0GUS0 222 aa15.17■□□□□ 0.02
GNE-201ENST00000377902 NPPCP23582 126 aa15.17■□□□□ 0.02
GNE-201ENST00000377902 CHRNA7P36544 502 aa15.17■□□□□ 0.02
GNE-201ENST00000377902 RPL30P62888 115 aaKnown RBP15.17■□□□□ 0.02
GNE-201ENST00000377902 ZXDAP98168 799 aa15.17■□□□□ 0.02
GNE-201ENST00000377902 SSX2Q16385 188 aa15.17■□□□□ 0.02
GNE-201ENST00000377902 TMEM14EPQ6UXP3 125 aa15.17■□□□□ 0.02
GNE-201ENST00000377902 LIN7CQ9NUP9 197 aaKnown RBP15.17■□□□□ 0.02
GNE-201ENST00000377902 OR4A8P0C604 315 aa15.16■□□□□ 0.02
GNE-201ENST00000377902 PMS2P11Q13670 270 aa15.16■□□□□ 0.02
GNE-201ENST00000377902 NRN1LQ496H8 165 aa15.16■□□□□ 0.02
GNE-201ENST00000377902 NUFIP2Q7Z417 695 aaKnown RBP15.16■□□□□ 0.02
GNE-201ENST00000377902 RNASEH2CQ8TDP1 164 aaKnown RBP15.16■□□□□ 0.02
GNE-201ENST00000377902 C5orf30Q96GV9 206 aa15.16■□□□□ 0.02
GNE-201ENST00000377902 IGKV3D-15A0A087WSY6 115 aa15.16■□□□□ 0.02
GNE-201ENST00000377902 GYPAP02724 150 aa15.16■□□□□ 0.02
GNE-201ENST00000377902 TFF1P04155 84 aa15.16■□□□□ 0.02
GNE-201ENST00000377902 CLDN18P56856 261 aa15.16■□□□□ 0.02
GNE-201ENST00000377902 FFAR4Q5NUL3 377 aa15.16■□□□□ 0.02
GNE-201ENST00000377902 ZNF497Q6ZNH5 498 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms