RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 HSD17B12Q53GQ0 312 aa11.48□□□□□ -0.57
HDAC6-204ENST00000376643 C1orf100Q5SVJ3 147 aa11.48□□□□□ -0.57
HDAC6-204ENST00000376643 SVOPQ8N4V2 548 aa11.48□□□□□ -0.57
HDAC6-204ENST00000376643 OR6Q1Q8NGQ2 317 aa11.48□□□□□ -0.57
HDAC6-204ENST00000376643 FLYWCH2Q96CP2 140 aaKnown RBP11.48□□□□□ -0.57
HDAC6-204ENST00000376643 SULT4A1Q9BR01 284 aa11.48□□□□□ -0.57
HDAC6-204ENST00000376643 IFI27L2Q9H2X8 130 aa11.48□□□□□ -0.57
HDAC6-204ENST00000376643 ISYNA1Q9NPH2 558 aa11.48□□□□□ -0.57
HDAC6-204ENST00000376643 SCN3BQ9NY72 215 aa11.48□□□□□ -0.57
HDAC6-204ENST00000376643 WASHC3Q9Y3C0 194 aa11.48□□□□□ -0.57
HDAC6-204ENST00000376643 TRBV6-6A0A0A6YYG2 114 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 LINC01619G3V211 115 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 G3V318 75 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 H7C2Y5 167 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 RRHO14718 337 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 HSPA12AO43301 675 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 SPDEFO95238 335 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 OR8U9P0C7N5 309 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 VSIG8P0DPA2 414 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 SRMP19623 302 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 RCN1Q15293 331 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 TRAM1Q15629 374 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 ECSCRQ19T08 205 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 FAM131AQ6UXB0 335 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 SETD6Q8TBK2 473 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 ABHD5Q8WTS1 349 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 FBLIM1Q8WUP2 373 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 TSNAXQ99598 290 aaKnown RBP11.47□□□□□ -0.57
HDAC6-204ENST00000376643 FAAP24Q9BTP7 215 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 SLA2Q9H6Q3 261 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 GNB4Q9HAV0 340 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 TENM3Q9P273 2699 aa11.47□□□□□ -0.57
HDAC6-204ENST00000376643 A0A1W2PN81 502 aa11.46□□□□□ -0.57
HDAC6-204ENST00000376643 SLC22A1O15245 554 aa11.46□□□□□ -0.57
HDAC6-204ENST00000376643 SAP30O75446 220 aa11.46□□□□□ -0.57
HDAC6-204ENST00000376643 NAPSAO96009 420 aa11.46□□□□□ -0.57
HDAC6-204ENST00000376643 LGALS1P09382 135 aaKnown RBP11.46□□□□□ -0.57
HDAC6-204ENST00000376643 PSMA1P25786 263 aaKnown RBP11.46□□□□□ -0.57
HDAC6-204ENST00000376643 CHRNA7P36544 502 aa11.46□□□□□ -0.57
HDAC6-204ENST00000376643 OR3A3P47888 321 aa11.46□□□□□ -0.57
HDAC6-204ENST00000376643 SPHARQ15513 63 aa11.46□□□□□ -0.57
HDAC6-204ENST00000376643 ZNF880Q6PDB4 577 aa11.46□□□□□ -0.57
HDAC6-204ENST00000376643 CD200R1LQ6Q8B3 271 aa11.46□□□□□ -0.57
HDAC6-204ENST00000376643 C6orf201Q7Z4U5 140 aa11.46□□□□□ -0.57
HDAC6-204ENST00000376643 UFD1Q92890 307 aa11.46□□□□□ -0.57
HDAC6-204ENST00000376643 TMED9Q9BVK6 235 aa11.46□□□□□ -0.57
HDAC6-204ENST00000376643 KLK15Q9H2R5 256 aa11.46□□□□□ -0.57
HDAC6-204ENST00000376643 C12orf4Q9NQ89 552 aa11.46□□□□□ -0.57
HDAC6-204ENST00000376643 FKBP14Q9NWM8 211 aa11.46□□□□□ -0.57
HDAC6-204ENST00000376643 TMEM14DPA8MWL7 114 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 ST8SIA5O15466 376 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 ARL6IP5O75915 188 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 APOA2P02652 100 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 TFAP2AP05549 437 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 CDK1P06493 297 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 ARSBP15848 533 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 GNB1P62873 340 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 CX3CL1P78423 397 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 MRPS15P82914 257 aaKnown RBP11.45□□□□□ -0.58
HDAC6-204ENST00000376643 PITPNAQ00169 270 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 KIAA0141Q14154 515 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-204ENST00000376643 AKIRIN2Q53H80 203 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 ACTBL2Q562R1 376 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 CEACAM19Q7Z692 300 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 LRRTM1Q86UE6 522 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 OR5AN1Q8NGI8 311 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 OR5B12Q96R08 314 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 CENPOQ9BU64 300 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 ELOVL1Q9BW60 279 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 TOLLIPQ9H0E2 274 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 PLGRKTQ9HBL7 147 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 ZNF221Q9UK13 617 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 HSF4Q9ULV5 492 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 COL7A1Q02388 2944 aa11.45□□□□□ -0.58
HDAC6-204ENST00000376643 H0YJW9 148 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 H3BUA1 57 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 CASQ2O14958 399 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-204ENST00000376643 HSPB1P04792 205 aaKnown RBP11.44□□□□□ -0.58
HDAC6-204ENST00000376643 GNAO1P09471 354 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 CPEP16870 476 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 CNTFRP26992 372 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 SERPINB10P48595 397 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 PSMD7P51665 324 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 HLA-DRB3P79483 266 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 CBX3Q13185 183 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 MED22Q15528 200 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 MOGAT2Q3SYC2 334 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 OGFRL1Q5TC84 451 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-204ENST00000376643 ZNF562Q6V9R5 426 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 PPP1R27Q86WC6 154 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 PDPNQ86YL7 162 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-204ENST00000376643 DCUN1D4Q92564 292 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 OR4C12Q96R67 309 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 FBXL15Q9H469 300 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 ZMAT4Q9H898 229 aa11.44□□□□□ -0.58
HDAC6-204ENST00000376643 UCHL1P09936 223 aa11.43□□□□□ -0.58
HDAC6-204ENST00000376643 CT45A6P0DMU7 189 aa11.43□□□□□ -0.58
HDAC6-204ENST00000376643 CT45A5P0DMU8 189 aa11.43□□□□□ -0.58
HDAC6-204ENST00000376643 CT45A7P0DMV0 189 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms