RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CLDN1O95832 211 aa12.26□□□□□ -0.45
MSH5-201ENST00000375703 CYB5R3P00387 301 aaPredicted RBP12.26□□□□□ -0.45
MSH5-201ENST00000375703 SLC38A11Q08AI6 406 aa12.26□□□□□ -0.45
MSH5-201ENST00000375703 SPNS3Q6ZMD2 512 aa12.26□□□□□ -0.45
MSH5-201ENST00000375703 PARD6GQ9BYG4 376 aaPredicted RBP12.26□□□□□ -0.45
MSH5-201ENST00000375703 RBKSQ9H477 322 aa12.26□□□□□ -0.45
MSH5-201ENST00000375703 DOCK7Q96N67 2140 aa12.26□□□□□ -0.45
MSH5-201ENST00000375703 UBE2L5PA0A1B0GUS4 154 aa12.26□□□□□ -0.45
MSH5-201ENST00000375703 MAP1LC3B2A6NCE7 125 aa12.26□□□□□ -0.45
MSH5-201ENST00000375703 J3QW42 95 aa12.26□□□□□ -0.45
MSH5-201ENST00000375703 IFNA1P01562 189 aa12.26□□□□□ -0.45
MSH5-201ENST00000375703 IGHV2-70P01814 119 aa12.26□□□□□ -0.45
MSH5-201ENST00000375703 CD46P15529 392 aa12.26□□□□□ -0.45
MSH5-201ENST00000375703 IDH3GP51553 393 aaPredicted RBP12.26□□□□□ -0.45
MSH5-201ENST00000375703 OR13D1Q8NGV5 346 aa12.26□□□□□ -0.45
MSH5-201ENST00000375703 EDARADDQ8WWZ3 215 aa12.26□□□□□ -0.45
MSH5-201ENST00000375703 MAP1LC3BQ9GZQ8 125 aa12.26□□□□□ -0.45
MSH5-201ENST00000375703 TRBV23-1A0A0A0MS06 115 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 TRGV5A0A0B4J1U4 118 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 ZNF737O75373 536 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 KRASP01116 189 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 CEBPDP49716 269 aaPredicted RBP12.25□□□□□ -0.45
MSH5-201ENST00000375703 UBE2NP61088 152 aaKnown RBP12.25□□□□□ -0.45
MSH5-201ENST00000375703 TNFRSF9Q07011 255 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 HNF4GQ14541 408 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 BEND4Q6ZU67 534 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 C1orf87Q8N0U7 546 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 SLC25A40Q8TBP6 338 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 LHX4Q969G2 390 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 GALMQ96C23 342 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 FER1L6-AS2Q96M78 137 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 RAMP3O60896 148 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 HAND1O96004 215 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 SELEP16581 610 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 TMEM14EPQ6UXP3 125 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 ZNF645Q8N7E2 425 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 OR1L1Q8NH94 360 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 SPRR3Q9UBC9 169 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 AHCTF1Q8WYP5 2266 aa12.25□□□□□ -0.45
MSH5-201ENST00000375703 PSPNO60542 156 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 RAC2P15153 192 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 G6PCP35575 357 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 OR3A1P47881 315 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 RND2P52198 227 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 NKX6-1P78426 367 aaPredicted RBP12.24□□□□□ -0.45
MSH5-201ENST00000375703 PSG7Q13046 419 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 OR2B11Q5JQS5 317 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 RPP25LQ8N5L8 163 aaKnown RBP12.24□□□□□ -0.45
MSH5-201ENST00000375703 ZBTB34Q8NCN2 500 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 SEC14L6B5MCN3 397 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 CD55P08174 381 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 SELLP14151 372 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 IL2RGP31785 369 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 ZNF816Q0VGE8 651 aaPredicted RBP12.24□□□□□ -0.45
MSH5-201ENST00000375703 MSMO1Q15800 293 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 PYY3Q5JQD4 70 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 RNFT1Q5M7Z0 435 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 OR2D2Q9H210 308 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 HSPB7Q9UBY9 170 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 ARHGAP21Q5T5U3 1957 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 TMEM30CPA0ZSE6 113 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 LNP1A1A4G5 178 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 TRGC1P0CF51 173 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 RPL30P62888 115 aaKnown RBP12.24□□□□□ -0.45
MSH5-201ENST00000375703 TGFBR3Q03167 851 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 ZNF808Q8N4W9 903 aaPredicted RBP12.24□□□□□ -0.45
MSH5-201ENST00000375703 ABHD5Q8WTS1 349 aa12.24□□□□□ -0.45
MSH5-201ENST00000375703 WDFY4Q6ZS81 3184 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 IQCF6A8MYZ5 107 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 PPP1R2P9O14990 202 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 GABRA6Q16445 453 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 ZNF766Q5HY98 468 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 WDR25Q64LD2 544 aaPredicted RBP12.23□□□□□ -0.45
MSH5-201ENST00000375703 OR52L2PQ8NGH6 319 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 FRZBQ92765 325 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 OBP2BQ9NPH6 170 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.23□□□□□ -0.45
MSH5-201ENST00000375703 TIMM9Q9Y5J7 89 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 MED12LQ86YW9 2145 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 C12orf77C9JDV5 145 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 LYZL6O75951 148 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 IGKV1D-33P01593 117 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 IGKV1-33P01594 117 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 IGHV1-2P23083 117 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 AESQ08117 197 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 PMS2P11Q13670 270 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 FAM53AQ6NSI3 398 aaPredicted RBP12.23□□□□□ -0.45
MSH5-201ENST00000375703 CXorf67Q86X51 503 aaPredicted RBP12.23□□□□□ -0.45
MSH5-201ENST00000375703 OR10D4PQ8NGN7 298 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 GMPPAQ96IJ6 420 aaPredicted RBP12.23□□□□□ -0.45
MSH5-201ENST00000375703 CLN8Q9UBY8 286 aa12.23□□□□□ -0.45
MSH5-201ENST00000375703 COLQQ9Y215 455 aaPredicted RBP12.23□□□□□ -0.45
MSH5-201ENST00000375703 TMEM210A6NLX4 147 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 LRRC30A6NM36 301 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 SOD3P08294 240 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 ATP6V1FQ16864 119 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 GFI1BQ5VTD9 330 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 CENPVQ7Z7K6 275 aaPredicted RBP12.22□□□□□ -0.45
MSH5-201ENST00000375703 GUCD1Q96NT3 240 aa12.22□□□□□ -0.45
MSH5-201ENST00000375703 GPR61Q9BZJ8 451 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms