RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ZNF716A6NP11 495 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 GCM2O75603 506 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-204ENST00000375290 SMAD4Q13485 552 aaKnown RBP8.86□□□□□ -0.99
PTCH1-204ENST00000375290 C10orf128Q5T292 105 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 LRTM2Q8N967 370 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 RPEQ96AT9 228 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 PXMP4Q9Y6I8 212 aa8.86□□□□□ -0.99
PTCH1-204ENST00000375290 GNB1P62873 340 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 ZNF362Q5T0B9 420 aaPredicted RBP8.85□□□□□ -0.99
PTCH1-204ENST00000375290 CCL28Q9NRJ3 127 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 A0A0G2JMZ2 1700 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 LRRC37A2A6NM11 1700 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 GOSR1O95249 250 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 SMOC1Q9H4F8 434 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 AP5S1Q9NUS5 200 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 TBL2Q9Y4P3 447 aaKnown RBP8.85□□□□□ -0.99
PTCH1-204ENST00000375290 RNF222A6NCQ9 220 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 KIF26BQ2KJY2 2108 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 SEC11AP67812 179 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 TNFRSF9Q07011 255 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 C10orf111Q8N326 155 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 KIR2DL1P43626 348 aaPredicted RBP8.85□□□□□ -0.99
PTCH1-204ENST00000375290 KIR2DL2P43627 348 aaPredicted RBP8.85□□□□□ -0.99
PTCH1-204ENST00000375290 ZNF124Q15973 351 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.85□□□□□ -0.99
PTCH1-204ENST00000375290 J3QR06 171 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 ZNF146Q15072 292 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 ATP5L2Q7Z4Y8 100 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 ZNF785A8K8V0 405 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 B4E171 279 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 LGALS7P47929 136 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 RPL11P62913 178 aaKnown RBP8.85□□□□□ -0.99
PTCH1-204ENST00000375290 GNB1LQ9BYB4 327 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 RP1L1Q8IWN7 2480 aaPredicted RBP8.85□□□□□ -0.99
PTCH1-204ENST00000375290 ODAMA1E959 279 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 MMD2Q8IY49 270 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 TMEM170AQ8WVE7 144 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 C2orf88Q9BSF0 95 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 CA6P23280 308 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 TCTN1Q2MV58 587 aa8.85□□□□□ -0.99
PTCH1-204ENST00000375290 CFPP27918 469 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 SH3BGRL2Q9UJC5 107 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 SHANK3Q9BYB0 1731 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 OR2Y1Q8NGV0 311 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 ST20Q9HBF5 79 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 GPA33Q99795 319 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 SIP14410 1827 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 SMIM13P0DJ93 91 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 UCP1P25874 307 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 TMEM187Q14656 261 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 HERPUD1Q15011 391 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 WDR25Q64LD2 544 aaPredicted RBP8.84□□□□□ -0.99
PTCH1-204ENST00000375290 PCGF1Q9BSM1 259 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 CD5P06127 495 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 PSG2P11465 335 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 EFNB2P52799 333 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 SRSF4Q08170 494 aaKnown RBP8.84□□□□□ -0.99
PTCH1-204ENST00000375290 CIRBPQ14011 172 aaKnown RBP8.84□□□□□ -0.99
PTCH1-204ENST00000375290 CLEC12BQ2HXU8 276 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 OR4X2Q8NGF9 303 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 MAP1LC3AQ9H492 121 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 HSPB7Q9UBY9 170 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 HIGD1AQ9Y241 93 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 DNASE2O00115 360 aaPredicted RBP8.84□□□□□ -0.99
PTCH1-204ENST00000375290 MGST3O14880 152 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 PRDM13Q9H4Q3 707 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 DOCK4Q8N1I0 1966 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 IGHV1OR21-1A0A087WYE8 117 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 IGLV1-36A0A0B4J1U3 117 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 GNG7O60262 68 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 MOSPD3O75425 235 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 DRD3P35462 400 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 IGLV3-21P80748 117 aaPredicted RBP8.84□□□□□ -0.99
PTCH1-204ENST00000375290 FAM90A1Q86YD7 464 aa8.84□□□□□ -0.99
PTCH1-204ENST00000375290 HYPMO75409 117 aa8.84□□□□□ -1
PTCH1-204ENST00000375290 RASL10BQ96S79 203 aa8.84□□□□□ -1
PTCH1-204ENST00000375290 ZNF665Q9H7R5 613 aa8.84□□□□□ -1
PTCH1-204ENST00000375290 TMEM56-RWDD3S4R434 201 aa8.84□□□□□ -1
PTCH1-204ENST00000375290 NDUFB4O95168 129 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 P2RY6Q15077 328 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 C8orf88P0DMB2 117 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 MEOX1P50221 254 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 OR1B1Q8NGR6 318 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 FOXJ2Q9P0K8 574 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 TRGV5A0A0B4J1U4 118 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 H0Y8X5 98 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 K7N7A8 449 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 ACER2Q5QJU3 275 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 CLEC5AQ9NY25 188 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 RAB37Q96AX2 223 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 MAS1LP35410 378 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 ZNF775Q96BV0 537 aaPredicted RBP8.83□□□□□ -1
PTCH1-204ENST00000375290 FMC1Q96HJ9 113 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 MARCH11A6NNE9 402 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 HYAL3O43820 417 aaPredicted RBP8.83□□□□□ -1
PTCH1-204ENST00000375290 CTSSP25774 331 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 GFERP55789 205 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 LRRC75BQ2VPJ9 315 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 OR2J3O76001 311 aa8.83□□□□□ -1
PTCH1-204ENST00000375290 NR2C2APQ86WQ0 139 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms