RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 NDUFAF3Q9BU61 184 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 SLC25A22Q9H936 323 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 GPR35Q9HC97 309 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 KCNS2Q9ULS6 477 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 FUT9Q9Y231 359 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 A0A096LPE4 126 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 A0A1W2PPZ6 126 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 PMS2P11Q13670 270 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 LBHQ53QV2 105 aaPredicted RBP9.42□□□□□ -0.9
CCDC40-203ENST00000374877 MRPL21Q7Z2W9 205 aaKnown RBP9.42□□□□□ -0.9
CCDC40-203ENST00000374877 MRPL41Q8IXM3 137 aaKnown RBP9.42□□□□□ -0.9
CCDC40-203ENST00000374877 RNASEH2CQ8TDP1 164 aaKnown RBP9.42□□□□□ -0.9
CCDC40-203ENST00000374877 NOL4LQ96MY1 436 aaPredicted RBP9.42□□□□□ -0.9
CCDC40-203ENST00000374877 DLL3Q9NYJ7 618 aa9.42□□□□□ -0.9
CCDC40-203ENST00000374877 A0A0G2JMM0 328 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 A0A1W2PPB8 328 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 A0A1W2PRS3 328 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 KIR3DP1A8MWS1 328 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 RPL23P62829 140 aaKnown RBP9.41□□□□□ -0.9
CCDC40-203ENST00000374877 ZDHHC23Q8IYP9 409 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 OR51G1Q8NGK1 321 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 MRPL30Q8TCC3 161 aaKnown RBP9.41□□□□□ -0.9
CCDC40-203ENST00000374877 ABHD3Q8WU67 409 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 RAB24Q969Q5 203 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 SGCZQ96LD1 299 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 ACTR3CQ9C0K3 210 aaPredicted RBP9.41□□□□□ -0.9
CCDC40-203ENST00000374877 WDR61Q9GZS3 305 aaKnown RBP9.41□□□□□ -0.9
CCDC40-203ENST00000374877 OR1A1Q9P1Q5 309 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 TP53TG5Q9Y2B4 290 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 KBTBD11O94819 623 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 IGKV1-39P01597 117 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 IGKV1D-39P04432 117 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 MMP7P09237 267 aaPredicted RBP9.41□□□□□ -0.9
CCDC40-203ENST00000374877 RPP25LQ8N5L8 163 aaKnown RBP9.41□□□□□ -0.9
CCDC40-203ENST00000374877 PINX1Q96BK5 328 aaKnown RBP9.41□□□□□ -0.9
CCDC40-203ENST00000374877 ADGRG7Q96K78 797 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 WFIKKN1Q96NZ8 548 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 C1QTNF5Q9BXJ0 243 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 FAM186AA6NE01 2351 aa9.41□□□□□ -0.9
CCDC40-203ENST00000374877 PAX1P15863 534 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 PSMB3P49720 205 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 SPCS3P61009 180 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 Q0VFX4 171 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 SLC10A1Q14973 349 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 SRSF7Q16629 238 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCDC40-203ENST00000374877 ZNF324BQ6AW86 544 aaPredicted RBP9.4□□□□□ -0.9
CCDC40-203ENST00000374877 OR4F5Q8NH21 305 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 OR10D3Q8NH80 312 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 TAF15Q92804 592 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCDC40-203ENST00000374877 OR4F4Q96R69 305 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 ATG101Q9BSB4 218 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 PARLQ9H300 379 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 OR51I2Q9H344 312 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 FREM1Q5H8C1 2179 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 C5orf49A4QMS7 147 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 EREGO14944 169 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 IGKV1D-33P01593 117 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 IGKV1-33P01594 117 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 SLC38A11Q08AI6 406 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 RNPS1Q15287 305 aaKnown RBP9.4□□□□□ -0.9
CCDC40-203ENST00000374877 Q8NFD4 153 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 OR10V1Q8NGI7 309 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 SPSB4Q96A44 273 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 SH2D2AQ9NP31 389 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 ESPL1Q14674 2120 aa9.4□□□□□ -0.9
CCDC40-203ENST00000374877 WDR1O75083 606 aa9.4□□□□□ -0.91
CCDC40-203ENST00000374877 CLDN1O95832 211 aa9.4□□□□□ -0.91
CCDC40-203ENST00000374877 IGKV1-5P01602 117 aa9.4□□□□□ -0.91
CCDC40-203ENST00000374877 SLC25A6P12236 298 aa9.4□□□□□ -0.91
CCDC40-203ENST00000374877 WIPI1Q5MNZ9 446 aaPredicted RBP9.4□□□□□ -0.91
CCDC40-203ENST00000374877 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.4□□□□□ -0.91
CCDC40-203ENST00000374877 GATAD1Q8WUU5 269 aa9.4□□□□□ -0.91
CCDC40-203ENST00000374877 PRDM14Q9GZV8 571 aa9.4□□□□□ -0.91
CCDC40-203ENST00000374877 IL18BPO95998 194 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 GCGP01275 180 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 CEACAM21Q3KPI0 293 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 ABLIM2Q6H8Q1 611 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 GGNQ86UU5 652 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 TMEM18Q96B42 140 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 ZNF845Q96IR2 970 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-203ENST00000374877 FER1L6-AS2Q96M78 137 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 PYGO2Q9BRQ0 406 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 ZNF552Q9H707 407 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-203ENST00000374877 PLA2G3Q9NZ20 509 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 MUC6Q6W4X9 2439 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 VPS13AQ96RL7 3174 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 KIAA1549Q9HCM3 1950 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 HRASP01112 189 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 OR4A8P0C604 315 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 B3GALT5-AS1P59052 145 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 PRSS8Q16651 343 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 TGIF2LYQ8IUE0 185 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 IL17BQ9UHF5 180 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 DNPH1O43598 174 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 RFPL3SP0C7P2 107 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 FAM3BP58499 235 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-203ENST00000374877 RPS16P62249 146 aaKnown RBP9.39□□□□□ -0.91
CCDC40-203ENST00000374877 TMEM170AQ8WVE7 144 aa9.39□□□□□ -0.91
CCDC40-203ENST00000374877 REPIN1Q9BWE0 567 aaKnown RBP9.39□□□□□ -0.91
CCDC40-203ENST00000374877 OR51B6Q9H340 312 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms