RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 SPERTQ8NA61 448 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 TMEM178AQ8NBL3 297 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 UBAC2Q8NBM4 344 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 BPIFCQ8NFQ6 507 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 OR5L1Q8NGL2 311 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 TMED6Q8WW62 240 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 DYRK2Q92630 601 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 BCL2L2Q92843 193 aaPredicted RBP4.01□□□□□ -1.77
USP48-202ENST00000374730 TOMM40LQ969M1 308 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 ABHD14BQ96IU4 210 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 SMIM8Q96KF7 97 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 SPXQ9BT56 116 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 PKIBQ9C010 78 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 ARV1Q9H2C2 271 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 HRH4Q9H3N8 390 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 RIMS4Q9H426 269 aaPredicted RBP4.01□□□□□ -1.77
USP48-202ENST00000374730 ZDHHC11Q9H8X9 412 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 Q9N2K0 584 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 ZNF581Q9P0T4 197 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 SPRR3Q9UBC9 169 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 CARHSP1Q9Y2V2 147 aaKnown RBP4.01□□□□□ -1.77
USP48-202ENST00000374730 AMDHD2Q9Y303 409 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 NSG2Q9Y328 171 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 LIPGQ9Y5X9 500 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 ARID1AO14497 2285 aa4.01□□□□□ -1.77
USP48-202ENST00000374730 ANKRD11Q6UB99 2663 aaPredicted RBP4□□□□□ -1.77
USP48-202ENST00000374730 CACNA1BQ00975 2339 aa4□□□□□ -1.77
USP48-202ENST00000374730 ATRXP46100 2492 aa4□□□□□ -1.77
USP48-202ENST00000374730 PTPRBP23467 1997 aa4□□□□□ -1.77
USP48-202ENST00000374730 A0A0A0MQY5 61 aa4□□□□□ -1.77
USP48-202ENST00000374730 TRGV5A0A0B4J1U4 118 aa4□□□□□ -1.77
USP48-202ENST00000374730 PIGBOS1A0A0B4J2F0 54 aa4□□□□□ -1.77
USP48-202ENST00000374730 TMEM218A2RU14 115 aa4□□□□□ -1.77
USP48-202ENST00000374730 SLC22A20A6NK97 555 aa4□□□□□ -1.77
USP48-202ENST00000374730 ANKRD30BLA7E2S9 258 aa4□□□□□ -1.77
USP48-202ENST00000374730 ZNF732B4DXR9 585 aa4□□□□□ -1.77
USP48-202ENST00000374730 TRDCB7Z8K6 153 aa4□□□□□ -1.77
USP48-202ENST00000374730 NPIPB11E5RHQ5 1161 aa4□□□□□ -1.77
USP48-202ENST00000374730 J3QT63 122 aa4□□□□□ -1.77
USP48-202ENST00000374730 HSPB6O14558 160 aa4□□□□□ -1.77
USP48-202ENST00000374730 GPR137BO60478 399 aa4□□□□□ -1.77
USP48-202ENST00000374730 LRP3O75074 770 aa4□□□□□ -1.77
USP48-202ENST00000374730 ATG12O94817 140 aa4□□□□□ -1.77
USP48-202ENST00000374730 DIRAS3O95661 229 aa4□□□□□ -1.77
USP48-202ENST00000374730 IGHG3P01860 377 aa4□□□□□ -1.77
USP48-202ENST00000374730 APOC3P02656 99 aa4□□□□□ -1.77
USP48-202ENST00000374730 CCNOP22674 350 aa4□□□□□ -1.77
USP48-202ENST00000374730 IL32P24001 234 aa4□□□□□ -1.77
USP48-202ENST00000374730 APLNRP35414 380 aa4□□□□□ -1.77
USP48-202ENST00000374730 WNT5AP41221 380 aa4□□□□□ -1.77
USP48-202ENST00000374730 HAAOP46952 286 aa4□□□□□ -1.77
USP48-202ENST00000374730 P2RY1P47900 373 aa4□□□□□ -1.77
USP48-202ENST00000374730 GPM6AP51674 278 aa4□□□□□ -1.77
USP48-202ENST00000374730 FXYD4P59646 89 aa4□□□□□ -1.77
USP48-202ENST00000374730 GNG3P63215 75 aa4□□□□□ -1.77
USP48-202ENST00000374730 PJVKQ0ZLH3 352 aa4□□□□□ -1.77
USP48-202ENST00000374730 IL24Q13007 206 aa4□□□□□ -1.77
USP48-202ENST00000374730 BTN1A1Q13410 526 aa4□□□□□ -1.77
USP48-202ENST00000374730 PHLDA2Q53GA4 152 aa4□□□□□ -1.77
USP48-202ENST00000374730 C9orf135Q5VTT2 229 aa4□□□□□ -1.77
USP48-202ENST00000374730 SHEQ5VZ18 495 aa4□□□□□ -1.77
USP48-202ENST00000374730 RPL7L1Q6DKI1 246 aaKnown RBP4□□□□□ -1.77
USP48-202ENST00000374730 ZNF880Q6PDB4 577 aa4□□□□□ -1.77
USP48-202ENST00000374730 PRSS57Q6UWY2 283 aa4□□□□□ -1.77
USP48-202ENST00000374730 MOB1BQ7L9L4 216 aa4□□□□□ -1.77
USP48-202ENST00000374730 SPAG16Q8N0X2 631 aa4□□□□□ -1.77
USP48-202ENST00000374730 TEX45Q8NA69 505 aa4□□□□□ -1.77
USP48-202ENST00000374730 OR4D5Q8NGN0 318 aa4□□□□□ -1.77
USP48-202ENST00000374730 OR4A4PQ8NGN8 299 aa4□□□□□ -1.77
USP48-202ENST00000374730 MRPL30Q8TCC3 161 aaKnown RBP4□□□□□ -1.77
USP48-202ENST00000374730 GLYATL2Q8WU03 294 aa4□□□□□ -1.77
USP48-202ENST00000374730 TMEM170AQ8WVE7 144 aa4□□□□□ -1.77
USP48-202ENST00000374730 OR5P3Q8WZ94 311 aa4□□□□□ -1.77
USP48-202ENST00000374730 CORO2AQ92828 525 aa4□□□□□ -1.77
USP48-202ENST00000374730 IL22RA2Q969J5 263 aa4□□□□□ -1.77
USP48-202ENST00000374730 SLAMF9Q96A28 289 aa4□□□□□ -1.77
USP48-202ENST00000374730 GMPPAQ96IJ6 420 aaPredicted RBP4□□□□□ -1.77
USP48-202ENST00000374730 TMEM56Q96MV1 263 aa4□□□□□ -1.77
USP48-202ENST00000374730 SPIN2AQ99865 258 aa4□□□□□ -1.77
USP48-202ENST00000374730 SPIN2BQ9BPZ2 258 aa4□□□□□ -1.77
USP48-202ENST00000374730 CABLES2Q9BTV7 478 aa4□□□□□ -1.77
USP48-202ENST00000374730 TMEM222Q9H0R3 208 aa4□□□□□ -1.77
USP48-202ENST00000374730 C11orf1Q9H5F2 150 aa4□□□□□ -1.77
USP48-202ENST00000374730 TAF9BQ9HBM6 251 aa4□□□□□ -1.77
USP48-202ENST00000374730 OR2S2Q9NQN1 319 aa4□□□□□ -1.77
USP48-202ENST00000374730 ZC4H2Q9NQZ6 224 aa4□□□□□ -1.77
USP48-202ENST00000374730 PARP11Q9NR21 331 aa4□□□□□ -1.77
USP48-202ENST00000374730 GLRX2Q9NS18 164 aa4□□□□□ -1.77
USP48-202ENST00000374730 MTCH1Q9NZJ7 389 aa4□□□□□ -1.77
USP48-202ENST00000374730 GSKIPQ9P0R6 139 aa4□□□□□ -1.77
USP48-202ENST00000374730 LSM5Q9Y4Y9 91 aaKnown RBP4□□□□□ -1.77
USP48-202ENST00000374730 TMEM56-RWDD3S4R434 201 aa4□□□□□ -1.77
USP48-202ENST00000374730 ZNF318Q5VUA4 2279 aa4□□□□□ -1.77
USP48-202ENST00000374730 CHD3Q12873 2000 aaKnown RBP3.99□□□□□ -1.77
USP48-202ENST00000374730 PRRC2CQ9Y520 2896 aaKnown RBP3.99□□□□□ -1.77
USP48-202ENST00000374730 BORCS7-ASMTA0A0B4J1R7 106 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 IGHV4-28A0A0C4DH34 117 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 C3orf85A0A1B0GTC6 90 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 A4D1N5 150 aa3.99□□□□□ -1.77
USP48-202ENST00000374730 ARGFXA6NJG6 315 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms