RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 IL36RNQ9UBH0 155 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 FBXO7Q9Y3I1 522 aa7.3□□□□□ -1.24
SNRNP40-202ENST00000373720 hADV38S2A0JD32 116 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 NKX6-3A6NJ46 265 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 ZSCAN5BA6NJL1 495 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 KIAA1324LA8MWY0 1029 aaPredicted RBP7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 F8W036 122 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 H0YL77 283 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 C15orf65H3BRN8 121 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 ZG16O60844 167 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 CLDN1O95832 211 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 APOC3P02656 99 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 PRH1P02810 166 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 CAMLGP49069 296 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 UBE2KP61086 200 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 POLR2GP62487 172 aaKnown RBP eCLIP7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 TNFAIP6P98066 277 aaPredicted RBP7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 AESQ08117 197 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 SSX2Q16385 188 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 ALKBH6Q3KRA9 238 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 FAM74A1Q5RGS3 127 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 AKR1C8PQ5T2L2 129 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 BPIFCQ8NFQ6 507 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 OR5C1Q8NGR4 320 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 OR2G3Q8NGZ4 309 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 GPR146Q96CH1 333 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 LINC00052Q96N35 136 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 AGMATQ9BSE5 352 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 NKX6-2Q9C056 277 aaPredicted RBP7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 GAL3ST2Q9H3Q3 398 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 NARFLQ9H6Q4 476 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 KCNIP2Q9NS61 270 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 PRR13Q9NZ81 148 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 KIAA1456Q9P272 454 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 NDRG3Q9UGV2 375 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 KCNS2Q9ULS6 477 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 PRELID1Q9Y255 219 aa7.29□□□□□ -1.24
SNRNP40-202ENST00000373720 RTTNQ86VV8 2226 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 KBTBD11-OT1A0A1B0GTJ5 212 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 C17orf100A8MU93 164 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 FNDC10F2Z333 226 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 SSSCA1O60232 199 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 P0C879 139 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 CGB3P0DN86 165 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 CGB7P0DN87 165 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 OMGP23515 440 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 SNCAP37840 140 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 LPAR6P43657 344 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 GPR12P47775 334 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 THBS3P49746 956 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 ASCL1P50553 236 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 PPT1P50897 306 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 ERVK-16P61578 105 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 GNB2P62879 340 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 TNFRSF9Q07011 255 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 EFNB3Q15768 340 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 MORN2Q502X0 79 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 ZNF585BQ52M93 769 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 CXorf66Q5JRM2 361 aaPredicted RBP7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 ZNF788Q6ZQV5 615 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 Q6ZRG5 221 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 H2BFWTQ7Z2G1 175 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 ZNF429Q86V71 674 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 COQ2Q96H96 371 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 NARS2Q96I59 477 aaKnown RBP7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 S1PR3Q99500 378 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 P2RX4Q99571 388 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 OR2D2Q9H210 308 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 MSL2Q9HCI7 577 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 GCM1Q9NP62 436 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 TREM1Q9NP99 234 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 C19orf12Q9NSK7 152 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 FKBP11Q9NYL4 201 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 PSENENQ9NZ42 101 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 OR1A1Q9P1Q5 309 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 GNG12Q9UBI6 72 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 KAAG1Q9UBP8 84 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 CLN8Q9UBY8 286 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 PPP1R3CQ9UQK1 317 aa7.28□□□□□ -1.24
SNRNP40-202ENST00000373720 FRYLO94915 3013 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 MYO15AQ9UKN7 3530 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 IGKV1D-17A0A075B6S4 117 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 A0A1W2PPH5 198 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 B9A039 149 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 C17orf112F2Z3M2 114 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 SIGLEC5O15389 551 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 PPIHO43447 177 aaKnown RBP7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 HRASP01112 189 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 IFNA1P01562 189 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 HSPB1P04792 205 aaKnown RBP7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 H2AFB1P0C5Y9 115 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 NQO2P16083 231 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 BMP5P22003 454 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 SPCS3P61009 180 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 NHLH2Q02577 135 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 KLRB1Q12918 225 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 POU2AF1Q16633 256 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 MST1LQ2TV78 715 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 LRRC75BQ2VPJ9 315 aa7.27□□□□□ -1.25
SNRNP40-202ENST00000373720 TMEM249Q2WGJ8 235 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms