RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 UBE2V2Q15819 145 aa17.14■□□□□ 0.33
SYNC-201ENST00000373484 ASCL4Q6XD76 172 aa17.14■□□□□ 0.33
SYNC-201ENST00000373484 TCTEX1D2Q8WW35 142 aa17.14■□□□□ 0.33
SYNC-201ENST00000373484 C18orf12Q96KH6 178 aa17.14■□□□□ 0.33
SYNC-201ENST00000373484 C19orf12Q9NSK7 152 aa17.14■□□□□ 0.33
SYNC-201ENST00000373484 HIVEP1P15822 2718 aa17.14■□□□□ 0.33
SYNC-201ENST00000373484 BTBD17A6NE02 478 aa17.13■□□□□ 0.33
SYNC-201ENST00000373484 AGPAT2O15120 278 aa17.13■□□□□ 0.33
SYNC-201ENST00000373484 SERPINA2P20848 420 aa17.13■□□□□ 0.33
SYNC-201ENST00000373484 ABHD14BQ96IU4 210 aa17.13■□□□□ 0.33
SYNC-201ENST00000373484 OR2V2Q96R30 315 aa17.13■□□□□ 0.33
SYNC-201ENST00000373484 METTL9Q9H1A3 318 aa17.13■□□□□ 0.33
SYNC-201ENST00000373484 LSM5Q9Y4Y9 91 aaKnown RBP17.13■□□□□ 0.33
SYNC-201ENST00000373484 MED13LQ71F56 2210 aa17.13■□□□□ 0.33
SYNC-201ENST00000373484 YLPM1P49750 1951 aaKnown RBP17.13■□□□□ 0.33
SYNC-201ENST00000373484 IGHV1-69-2A0A0G2JMI3 117 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 ANKRD30BLA7E2S9 258 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 ZNF728P0DKX0 622 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 CAMLGP49069 296 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 SRPXP78539 464 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 LIAT1Q6ZQX7 453 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 LGI3Q8N145 548 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 ITLN1Q8WWA0 313 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 CHODLQ9H9P2 273 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 GSN-AS1Q9NRJ2 163 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 TMED3Q9Y3Q3 217 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 UMAD1C9J7I0 102 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 SLC25A16P16260 332 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 TNFRSF1AP19438 455 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 PIGPP57054 158 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 OR8G1Q15617 311 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 FOXRED2Q8IWF2 684 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 NANPQ8TBE9 248 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 ERGIC1Q969X5 290 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 MEGF10Q96KG7 1140 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 PIMREGQ9BSJ6 248 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 TMUB1Q9BVT8 246 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 HIPK2Q9H2X6 1198 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 SPACA1Q9HBV2 294 aa17.12■□□□□ 0.33
SYNC-201ENST00000373484 IGKV1D-8A0A087WSZ0 117 aa17.11■□□□□ 0.33
SYNC-201ENST00000373484 VWC2LB2RUY7 222 aa17.11■□□□□ 0.33
SYNC-201ENST00000373484 AP4M1O00189 453 aa17.11■□□□□ 0.33
SYNC-201ENST00000373484 ST8SIA3O43173 380 aa17.11■□□□□ 0.33
SYNC-201ENST00000373484 ABCA11PQ4W5N1 156 aa17.11■□□□□ 0.33
SYNC-201ENST00000373484 CCDC71LQ8N9Z2 235 aa17.11■□□□□ 0.33
SYNC-201ENST00000373484 TMPRSS5Q9H3S3 457 aa17.11■□□□□ 0.33
SYNC-201ENST00000373484 IFNA17P01571 189 aa17.1■□□□□ 0.33
SYNC-201ENST00000373484 CD200P41217 278 aa17.1■□□□□ 0.33
SYNC-201ENST00000373484 CLINT1Q14677 625 aa17.1■□□□□ 0.33
SYNC-201ENST00000373484 C6orf201Q7Z4U5 140 aa17.1■□□□□ 0.33
SYNC-201ENST00000373484 FAM185AQ8N0U4 392 aa17.1■□□□□ 0.33
SYNC-201ENST00000373484 HPSE2Q8WWQ2 592 aa17.1■□□□□ 0.33
SYNC-201ENST00000373484 RTN4IP1Q8WWV3 396 aaPredicted RBP17.1■□□□□ 0.33
SYNC-201ENST00000373484 IL36GQ9NZH8 169 aa17.1■□□□□ 0.33
SYNC-201ENST00000373484 PIGLQ9Y2B2 252 aa17.1■□□□□ 0.33
SYNC-201ENST00000373484 A0A096LNT2 108 aa17.1■□□□□ 0.33
SYNC-201ENST00000373484 SNRNP70P08621 437 aaKnown RBP17.1■□□□□ 0.33
SYNC-201ENST00000373484 CHATP28329 748 aa17.1■□□□□ 0.33
SYNC-201ENST00000373484 CNN3Q15417 329 aaKnown RBP17.1■□□□□ 0.33
SYNC-201ENST00000373484 CIARTQ8N365 385 aaPredicted RBP17.1■□□□□ 0.33
SYNC-201ENST00000373484 MAFIPQ8WZ33 124 aa17.1■□□□□ 0.33
SYNC-201ENST00000373484 PAPOLGQ9BWT3 736 aaKnown RBP17.1■□□□□ 0.33
SYNC-201ENST00000373484 BPESC1Q9GZL8 116 aa17.1■□□□□ 0.33
SYNC-201ENST00000373484 EIF5A2Q9GZV4 153 aaKnown RBP17.1■□□□□ 0.33
SYNC-201ENST00000373484 F8P00451 2351 aa17.1■□□□□ 0.33
SYNC-201ENST00000373484 RNF223E7ERA6 249 aa17.09■□□□□ 0.33
SYNC-201ENST00000373484 K7N7A8 449 aa17.09■□□□□ 0.33
SYNC-201ENST00000373484 M0R036 132 aa17.09■□□□□ 0.33
SYNC-201ENST00000373484 CDS2O95674 445 aa17.09■□□□□ 0.33
SYNC-201ENST00000373484 TMEM225BP0DP42 221 aa17.09■□□□□ 0.33
SYNC-201ENST00000373484 FAHP16930 419 aa17.09■□□□□ 0.33
SYNC-201ENST00000373484 SULT1A1P50225 295 aa17.09■□□□□ 0.33
SYNC-201ENST00000373484 ZNF616Q08AN1 781 aa17.09■□□□□ 0.33
SYNC-201ENST00000373484 FABP9Q0Z7S8 132 aa17.09■□□□□ 0.33
SYNC-201ENST00000373484 OR5D18Q8NGL1 313 aa17.09■□□□□ 0.33
SYNC-201ENST00000373484 GCM1Q9NP62 436 aa17.09■□□□□ 0.33
SYNC-201ENST00000373484 MPC1Q9Y5U8 109 aa17.09■□□□□ 0.33
SYNC-201ENST00000373484 ACANP16112 2415 aa17.09■□□□□ 0.33
SYNC-201ENST00000373484 ZNF816-ZNF321PA0A0X1KG74 233 aa17.08■□□□□ 0.33
SYNC-201ENST00000373484 CD99P14209 185 aa17.08■□□□□ 0.33
SYNC-201ENST00000373484 GATA4P43694 442 aa17.08■□□□□ 0.33
SYNC-201ENST00000373484 ZNF266Q14584 549 aa17.08■□□□□ 0.33
SYNC-201ENST00000373484 CCL17Q92583 94 aa17.08■□□□□ 0.33
SYNC-201ENST00000373484 MSI2Q96DH6 328 aaKnown RBP17.08■□□□□ 0.33
SYNC-201ENST00000373484 YPEL4Q96NS1 127 aa17.08■□□□□ 0.33
SYNC-201ENST00000373484 SMIM3Q9BZL3 60 aa17.08■□□□□ 0.33
SYNC-201ENST00000373484 WFDC1Q9HC57 220 aa17.08■□□□□ 0.33
SYNC-201ENST00000373484 TREM2Q9NZC2 230 aa17.08■□□□□ 0.33
SYNC-201ENST00000373484 PPP1R3CQ9UQK1 317 aa17.08■□□□□ 0.33
SYNC-201ENST00000373484 A0A087WWC5 75 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.07■□□□□ 0.32
SYNC-201ENST00000373484 A6NLC8 198 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 PTBP3O95758 552 aaKnown RBP17.07■□□□□ 0.32
SYNC-201ENST00000373484 PRDX4Q13162 271 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 LHFPL2Q6ZUX7 228 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 PIGCQ92535 297 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 MOB3AQ96BX8 217 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 ELL3Q9HB65 397 aaPredicted RBP17.07■□□□□ 0.32
SYNC-201ENST00000373484 NIT2Q9NQR4 276 aa17.07■□□□□ 0.32
SYNC-201ENST00000373484 A0A1W2PPH5 198 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms