RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 SOHLH1Q5JUK2 328 aa24.23■■□□□ 1.47
SSBP3-204ENST00000371320 ALKBH2Q6NS38 261 aa24.23■■□□□ 1.47
SSBP3-204ENST00000371320 INTS1Q8N201 2190 aaKnown RBP24.23■■□□□ 1.47
SSBP3-204ENST00000371320 LURAP1Q96LR2 239 aa24.23■■□□□ 1.47
SSBP3-204ENST00000371320 PTPRBP23467 1997 aa24.23■■□□□ 1.47
SSBP3-204ENST00000371320 PAX6P26367 422 aa24.23■■□□□ 1.47
SSBP3-204ENST00000371320 UBE2KP61086 200 aa24.23■■□□□ 1.47
SSBP3-204ENST00000371320 ARL16Q0P5N6 197 aa24.23■■□□□ 1.47
SSBP3-204ENST00000371320 CATR1Q13166 79 aa24.23■■□□□ 1.47
SSBP3-204ENST00000371320 EIF4EBP1Q13541 118 aaPredicted RBP24.23■■□□□ 1.47
SSBP3-204ENST00000371320 IGFL3Q6UXB1 125 aa24.23■■□□□ 1.47
SSBP3-204ENST00000371320 OR13A1Q8NGR1 328 aa24.23■■□□□ 1.47
SSBP3-204ENST00000371320 SSTR5P35346 364 aa24.22■■□□□ 1.47
SSBP3-204ENST00000371320 ZNF83P51522 516 aa24.22■■□□□ 1.47
SSBP3-204ENST00000371320 NUBP1P53384 320 aa24.22■■□□□ 1.47
SSBP3-204ENST00000371320 RAB2AP61019 212 aa24.22■■□□□ 1.47
SSBP3-204ENST00000371320 SPANXN5Q5MJ07 72 aa24.22■■□□□ 1.47
SSBP3-204ENST00000371320 SP5Q6BEB4 398 aaPredicted RBP24.22■■□□□ 1.47
SSBP3-204ENST00000371320 ZNF525Q8N782 197 aa24.22■■□□□ 1.47
SSBP3-204ENST00000371320 DUSP13Q9UII6 198 aa24.22■■□□□ 1.47
SSBP3-204ENST00000371320 KRASP01116 189 aa24.22■■□□□ 1.47
SSBP3-204ENST00000371320 ZNF816Q0VGE8 651 aaPredicted RBP24.22■■□□□ 1.47
SSBP3-204ENST00000371320 HAGHQ16775 308 aa24.22■■□□□ 1.47
SSBP3-204ENST00000371320 CD177Q8N6Q3 437 aa24.22■■□□□ 1.47
SSBP3-204ENST00000371320 CFAP47Q6ZTR5 3102 aa24.21■■□□□ 1.47
SSBP3-204ENST00000371320 HBE1P02100 147 aa24.21■■□□□ 1.47
SSBP3-204ENST00000371320 PRDX2P32119 198 aa24.21■■□□□ 1.47
SSBP3-204ENST00000371320 RAB13P51153 203 aa24.21■■□□□ 1.47
SSBP3-204ENST00000371320 MSMO1Q15800 293 aa24.21■■□□□ 1.47
SSBP3-204ENST00000371320 HAPLN4Q86UW8 402 aa24.21■■□□□ 1.47
SSBP3-204ENST00000371320 TCTEX1D2Q8WW35 142 aa24.21■■□□□ 1.47
SSBP3-204ENST00000371320 G6PCP35575 357 aa24.2■■□□□ 1.47
SSBP3-204ENST00000371320 LILRB2Q8N423 598 aa24.2■■□□□ 1.47
SSBP3-204ENST00000371320 RFESDQ8TAC1 157 aa24.2■■□□□ 1.47
SSBP3-204ENST00000371320 RBMXL1Q96E39 390 aaKnown RBP24.2■■□□□ 1.47
SSBP3-204ENST00000371320 RSG1Q9BU20 258 aa24.2■■□□□ 1.47
SSBP3-204ENST00000371320 HIPK2Q9H2X6 1198 aa24.2■■□□□ 1.47
SSBP3-204ENST00000371320 TNFRSF9Q07011 255 aa24.2■■□□□ 1.46
SSBP3-204ENST00000371320 BTNL3Q6UXE8 466 aa24.2■■□□□ 1.46
SSBP3-204ENST00000371320 LRP11Q86VZ4 500 aa24.2■■□□□ 1.46
SSBP3-204ENST00000371320 PRSS33Q8NF86 280 aa24.2■■□□□ 1.46
SSBP3-204ENST00000371320 SPENQ96T58 3664 aaKnown RBP24.19■■□□□ 1.46
SSBP3-204ENST00000371320 RHEBQ15382 184 aa24.19■■□□□ 1.46
SSBP3-204ENST00000371320 MSMPQ1L6U9 139 aa24.19■■□□□ 1.46
SSBP3-204ENST00000371320 RBKSQ9H477 322 aa24.19■■□□□ 1.46
SSBP3-204ENST00000371320 IGHV3-43A0A0B4J1X8 118 aa24.19■■□□□ 1.46
SSBP3-204ENST00000371320 M0R1B8 84 aa24.19■■□□□ 1.46
SSBP3-204ENST00000371320 SPINT2O43291 252 aa24.19■■□□□ 1.46
SSBP3-204ENST00000371320 IGHV3-43DP0DP04 118 aa24.19■■□□□ 1.46
SSBP3-204ENST00000371320 ZNF474Q6S9Z5 364 aaPredicted RBP24.19■■□□□ 1.46
SSBP3-204ENST00000371320 S100PBPQ96BU1 408 aa24.19■■□□□ 1.46
SSBP3-204ENST00000371320 UNKLQ9H9P5 680 aaKnown RBP24.19■■□□□ 1.46
SSBP3-204ENST00000371320 DSPP15924 2871 aaKnown RBP24.18■■□□□ 1.46
SSBP3-204ENST00000371320 C17orf98A8MV24 154 aa24.18■■□□□ 1.46
SSBP3-204ENST00000371320 NDUFA2O43678 99 aa24.18■■□□□ 1.46
SSBP3-204ENST00000371320 S1PR2O95136 353 aa24.18■■□□□ 1.46
SSBP3-204ENST00000371320 CLDN1O95832 211 aa24.18■■□□□ 1.46
SSBP3-204ENST00000371320 DAOP14920 347 aa24.18■■□□□ 1.46
SSBP3-204ENST00000371320 EGR1P18146 543 aa24.18■■□□□ 1.46
SSBP3-204ENST00000371320 EDDM3AQ14507 147 aa24.18■■□□□ 1.46
SSBP3-204ENST00000371320 TIMM23BQ5SRD1 257 aa24.18■■□□□ 1.46
SSBP3-204ENST00000371320 TRAT1Q6PIZ9 186 aa24.18■■□□□ 1.46
SSBP3-204ENST00000371320 TUBA4BQ9H853 241 aa24.18■■□□□ 1.46
SSBP3-204ENST00000371320 HSPB7Q9UBY9 170 aa24.18■■□□□ 1.46
SSBP3-204ENST00000371320 DMXL1Q9Y485 3027 aa24.17■■□□□ 1.46
SSBP3-204ENST00000371320 P0C879 139 aa24.17■■□□□ 1.46
SSBP3-204ENST00000371320 LRRC75BQ2VPJ9 315 aa24.17■■□□□ 1.46
SSBP3-204ENST00000371320 Q6ZS92 163 aa24.17■■□□□ 1.46
SSBP3-204ENST00000371320 DCTN5Q9BTE1 182 aa24.17■■□□□ 1.46
SSBP3-204ENST00000371320 EGLN1Q9GZT9 426 aa24.17■■□□□ 1.46
SSBP3-204ENST00000371320 FAM215AQ9Y5M1 114 aa24.17■■□□□ 1.46
SSBP3-204ENST00000371320 PUS1Q9Y606 427 aaKnown RBP eCLIP24.17■■□□□ 1.46
SSBP3-204ENST00000371320 SVILO95425 2214 aa24.17■■□□□ 1.46
SSBP3-204ENST00000371320 FOLR2P14207 255 aa24.17■■□□□ 1.46
SSBP3-204ENST00000371320 BRWD1-AS2P59051 145 aa24.17■■□□□ 1.46
SSBP3-204ENST00000371320 ICAM4Q14773 271 aa24.17■■□□□ 1.46
SSBP3-204ENST00000371320 ZNF506Q5JVG8 444 aa24.17■■□□□ 1.46
SSBP3-204ENST00000371320 TCTEX1D1Q8N7M0 179 aa24.17■■□□□ 1.46
SSBP3-204ENST00000371320 HIST1H2BAQ96A08 127 aa24.17■■□□□ 1.46
SSBP3-204ENST00000371320 PSMG3Q9BT73 122 aaPredicted RBP24.17■■□□□ 1.46
SSBP3-204ENST00000371320 DEFB108AA8MXU0 73 aa24.16■■□□□ 1.46
SSBP3-204ENST00000371320 SRRM5B3KS81 715 aa24.16■■□□□ 1.46
SSBP3-204ENST00000371320 SCAF4O95104 1147 aaKnown RBP24.16■■□□□ 1.46
SSBP3-204ENST00000371320 SRP19P09132 144 aaKnown RBP24.16■■□□□ 1.46
SSBP3-204ENST00000371320 OR8U8P0C7N1 319 aa24.16■■□□□ 1.46
SSBP3-204ENST00000371320 PAX5Q02548 391 aa24.16■■□□□ 1.46
SSBP3-204ENST00000371320 RPRMLQ8N4K4 120 aa24.16■■□□□ 1.46
SSBP3-204ENST00000371320 CLDND2Q8NHS1 167 aa24.16■■□□□ 1.46
SSBP3-204ENST00000371320 CTNNBIP1Q9NSA3 81 aaPredicted RBP24.16■■□□□ 1.46
SSBP3-204ENST00000371320 PSG11Q9UQ72 335 aa24.16■■□□□ 1.46
SSBP3-204ENST00000371320 TRAV1-1A0A0B4J248 108 aa24.15■■□□□ 1.46
SSBP3-204ENST00000371320 LRRC30A6NM36 301 aa24.15■■□□□ 1.46
SSBP3-204ENST00000371320 C15orf65H3BRN8 121 aa24.15■■□□□ 1.46
SSBP3-204ENST00000371320 ZNF737O75373 536 aa24.15■■□□□ 1.46
SSBP3-204ENST00000371320 HTD2P86397 168 aa24.15■■□□□ 1.46
SSBP3-204ENST00000371320 RTP5Q14D33 572 aa24.15■■□□□ 1.46
SSBP3-204ENST00000371320 ZNF66Q6ZN08 573 aa24.15■■□□□ 1.46
SSBP3-204ENST00000371320 RPRMQ9NS64 109 aa24.15■■□□□ 1.46
SSBP3-204ENST00000371320 IGKV1D-17A0A075B6S4 117 aa24.15■■□□□ 1.46
SSBP3-204ENST00000371320 ODAMA1E959 279 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms