RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 PIEZO1Q92508 2521 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 FRYQ5TBA9 3013 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 TGIF2-C20orf24A0A0A6YYL0 155 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 A0A1W2PRG6 482 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 RIIAD1A6NNX1 92 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 C17orf51A8MQB3 221 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 BLOC1S5-TXNDC5H3BN57 136 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.19□□□□□ -1.9
MCF2-203ENST00000370576 GNGT2O14610 69 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 PPIHO43447 177 aaKnown RBP3.19□□□□□ -1.9
MCF2-203ENST00000370576 TTRP02766 147 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 METTL15P1P0C7V9 234 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 S100A7P31151 101 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 OR3A2P47893 321 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 EIF4EBP1Q13541 118 aaPredicted RBP3.19□□□□□ -1.9
MCF2-203ENST00000370576 UBE2NLQ5JXB2 153 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 HES3Q5TGS1 186 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 C19orf35Q6ZS72 473 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 SMIM20Q8N5G0 67 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 SLC30A7Q8NEW0 376 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 OR52L1Q8NGH7 329 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 APH1AQ96BI3 265 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 TIMD4Q96H15 378 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 METTL17Q9H7H0 456 aaPredicted RBP3.19□□□□□ -1.9
MCF2-203ENST00000370576 RETNQ9HD89 108 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 MED29Q9NX70 200 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 TVP23BQ9NYZ1 205 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 PPP4R1LQ9P1A2 415 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 BRWD1Q9NSI6 2320 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 A0A0A6YYD4 124 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 A0A1W2PRE2 83 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 VWC2LB2RUY7 222 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 H7C417 338 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 HLA-DOBP13765 273 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 ZNF14P17017 642 aaPredicted RBP3.19□□□□□ -1.9
MCF2-203ENST00000370576 F2RP25116 425 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 DLX6P56179 175 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 GRB2P62993 217 aaKnown RBP3.19□□□□□ -1.9
MCF2-203ENST00000370576 Q499Y3 187 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 ZNF787Q6DD87 383 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 CMTM1Q8IZ96 169 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 OR56B4Q8NH76 319 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 NEIL3Q8TAT5 605 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 ZNF417Q8TAU3 575 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 STOML3Q8TAV4 291 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 SRSF12Q8WXF0 261 aaKnown RBP3.19□□□□□ -1.9
MCF2-203ENST00000370576 ZNF486Q96H40 463 aaPredicted RBP3.19□□□□□ -1.9
MCF2-203ENST00000370576 Q96M85 177 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 ZNF587Q96SQ5 575 aaPredicted RBP3.19□□□□□ -1.9
MCF2-203ENST00000370576 GALNT9Q9HCQ5 603 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 TMEM38BQ9NVV0 291 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 TMED3Q9Y3Q3 217 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 DOCK7Q96N67 2140 aa3.19□□□□□ -1.9
MCF2-203ENST00000370576 OR5H15A6NDH6 313 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 SH2D1BO14796 132 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 RAMP1O60894 148 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 MMP23AO75900 390 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 SOX14O95416 240 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 IGKV3-15P01624 115 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 PFN1P07737 140 aaKnown RBP3.18□□□□□ -1.9
MCF2-203ENST00000370576 CSF3P09919 207 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 ACSM4P0C7M7 580 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 KLF3P57682 345 aaPredicted RBP3.18□□□□□ -1.9
MCF2-203ENST00000370576 RRAS2P62070 204 aaPredicted RBP3.18□□□□□ -1.9
MCF2-203ENST00000370576 SURF2Q15527 256 aaPredicted RBP3.18□□□□□ -1.9
MCF2-203ENST00000370576 KLK9Q2XQG4 91 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 LEMD1Q68G75 181 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 DOLPP1Q86YN1 238 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 MTURNQ8N3F0 131 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 OR4F5Q8NH21 305 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 DCHS1Q96JQ0 3298 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 SMIM8Q96KF7 97 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 SIGLEC12Q96PQ1 595 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 GINS3Q9BRX5 216 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 TTTY12Q9BZ98 90 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 ULBP3Q9BZM4 244 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 B3GAT2Q9NPZ5 323 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 SLC7A10Q9NS82 523 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 SPRR3Q9UBC9 169 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 KLK9Q9UKQ9 250 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 DHDHQ9UQ10 334 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 OR5H14A6NHG9 310 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 IFITM5A6NNB3 132 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 MPTX1A8MV57 137 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 M0R129 80 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 SLC17A2O00624 439 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 PAX6P26367 422 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 HTR1DP28221 377 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 TNFSF8P32971 234 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 TGFBR1P36897 503 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 OR3A4PP47883 348 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 TGFBR3Q03167 851 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 ECH1Q13011 328 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 RAB35Q15286 201 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 TMEM255AQ5JRV8 349 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 WDR38Q5JTN6 314 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 ZNF660Q6AZW8 331 aaPredicted RBP3.18□□□□□ -1.9
MCF2-203ENST00000370576 WDR82Q6UXN9 313 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 LINC01551Q86U37 167 aa3.18□□□□□ -1.9
MCF2-203ENST00000370576 LHFPL1Q86WI0 220 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms