RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 MRPS7Q9Y2R9 242 aaKnown RBP11.92□□□□□ -0.5
COL9A1-204ENST00000370496 COL6A5A8TX70 2615 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 TRBV6-7A0A0A0MS04 114 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 IGHV3-72A0A0B4J1Y9 119 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 TMEM89A2RUT3 159 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 ITGB1BP1O14713 200 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 RAB29O14966 203 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 LANCL1O43813 399 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 NDUFA7O95182 113 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 IGKV1D-33P01593 117 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 IGKV1-33P01594 117 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 FCER2P06734 321 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 SNRNP70P08621 437 aaKnown RBP11.91□□□□□ -0.5
COL9A1-204ENST00000370496 OR3A3P47888 321 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 CCBE1Q6UXH8 406 aaPredicted RBP11.91□□□□□ -0.5
COL9A1-204ENST00000370496 C12orf54Q6X4T0 127 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 SNX29P2Q8IUI4 249 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 LAX1Q8IWV1 398 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 ODF3L1Q8IXM7 274 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 GVQW1Q8N7I0 195 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 BEST4Q8NFU0 473 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 CFHR4Q92496 578 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 S1PR3Q99500 378 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 SLC25A33Q9BSK2 321 aa11.91□□□□□ -0.5
COL9A1-204ENST00000370496 C6orf62Q9GZU0 229 aaPredicted RBP11.91□□□□□ -0.5
COL9A1-204ENST00000370496 C11orf54Q9H0W9 315 aaPredicted RBP11.91□□□□□ -0.5
COL9A1-204ENST00000370496 RBM7Q9Y580 266 aaKnown RBP11.91□□□□□ -0.5
COL9A1-204ENST00000370496 CTXN2P0C2S0 81 aa11.9□□□□□ -0.5
COL9A1-204ENST00000370496 TMEM11P17152 192 aa11.9□□□□□ -0.5
COL9A1-204ENST00000370496 PRSS3P35030 304 aa11.9□□□□□ -0.5
COL9A1-204ENST00000370496 GPR12P47775 334 aa11.9□□□□□ -0.5
COL9A1-204ENST00000370496 RELBQ01201 579 aa11.9□□□□□ -0.5
COL9A1-204ENST00000370496 AWAT1Q58HT5 328 aa11.9□□□□□ -0.5
COL9A1-204ENST00000370496 FAM71F2Q6NXP2 309 aa11.9□□□□□ -0.5
COL9A1-204ENST00000370496 CNIH2Q6PI25 160 aa11.9□□□□□ -0.5
COL9A1-204ENST00000370496 ZNF833PQ6ZTB9 187 aa11.9□□□□□ -0.5
COL9A1-204ENST00000370496 C16orf82Q7Z2V1 217 aa11.9□□□□□ -0.5
COL9A1-204ENST00000370496 ABHD14BQ96IU4 210 aa11.9□□□□□ -0.5
COL9A1-204ENST00000370496 DCUN1D5Q9BTE7 237 aa11.9□□□□□ -0.5
COL9A1-204ENST00000370496 MRPL20Q9BYC9 149 aaKnown RBP11.9□□□□□ -0.5
COL9A1-204ENST00000370496 OR2D2Q9H210 308 aa11.9□□□□□ -0.5
COL9A1-204ENST00000370496 RANBP3Q9H6Z4 567 aaPredicted RBP11.9□□□□□ -0.5
COL9A1-204ENST00000370496 ZNF221Q9UK13 617 aa11.9□□□□□ -0.5
COL9A1-204ENST00000370496 OR2F2O95006 317 aa11.89□□□□□ -0.51
COL9A1-204ENST00000370496 MDKP21741 143 aaPredicted RBP11.89□□□□□ -0.51
COL9A1-204ENST00000370496 LSAMPQ13449 338 aa11.89□□□□□ -0.51
COL9A1-204ENST00000370496 RPL39P5Q59GN2 51 aa11.89□□□□□ -0.51
COL9A1-204ENST00000370496 ARSJQ5FYB0 599 aaPredicted RBP11.89□□□□□ -0.51
COL9A1-204ENST00000370496 Q6ZSV7 163 aa11.89□□□□□ -0.51
COL9A1-204ENST00000370496 HOGA1Q86XE5 327 aa11.89□□□□□ -0.51
COL9A1-204ENST00000370496 H1FOOQ8IZA3 346 aaPredicted RBP11.89□□□□□ -0.51
COL9A1-204ENST00000370496 GHITMQ9H3K2 345 aa11.89□□□□□ -0.51
COL9A1-204ENST00000370496 BEX1Q9HBH7 125 aa11.89□□□□□ -0.51
COL9A1-204ENST00000370496 RNF150Q9ULK6 438 aa11.89□□□□□ -0.51
COL9A1-204ENST00000370496 ZNF701M0R085 212 aaPredicted RBP11.88□□□□□ -0.51
COL9A1-204ENST00000370496 OR8U9P0C7N5 309 aa11.88□□□□□ -0.51
COL9A1-204ENST00000370496 COMPP49747 757 aaPredicted RBP11.88□□□□□ -0.51
COL9A1-204ENST00000370496 HABP2Q14520 560 aaPredicted RBP11.88□□□□□ -0.51
COL9A1-204ENST00000370496 FBLN7Q53RD9 439 aa11.88□□□□□ -0.51
COL9A1-204ENST00000370496 THNSL2Q86YJ6 484 aa11.88□□□□□ -0.51
COL9A1-204ENST00000370496 OR8U1Q8NH10 309 aa11.88□□□□□ -0.51
COL9A1-204ENST00000370496 MCFD2Q8NI22 146 aa11.88□□□□□ -0.51
COL9A1-204ENST00000370496 SNAPC3Q92966 411 aa11.88□□□□□ -0.51
COL9A1-204ENST00000370496 AGMATQ9BSE5 352 aa11.88□□□□□ -0.51
COL9A1-204ENST00000370496 SLIRPQ9GZT3 109 aaKnown RBP11.88□□□□□ -0.51
COL9A1-204ENST00000370496 TOLLIPQ9H0E2 274 aa11.88□□□□□ -0.51
COL9A1-204ENST00000370496 MIXL1Q9H2W2 232 aa11.88□□□□□ -0.51
COL9A1-204ENST00000370496 NECAP2Q9NVZ3 263 aa11.88□□□□□ -0.51
COL9A1-204ENST00000370496 MOB4Q9Y3A3 225 aa11.88□□□□□ -0.51
COL9A1-204ENST00000370496 A0A1B0GUS0 222 aa11.87□□□□□ -0.51
COL9A1-204ENST00000370496 FAM90A9PA6NNJ1 464 aa11.87□□□□□ -0.51
COL9A1-204ENST00000370496 CTDSP2O14595 271 aa11.87□□□□□ -0.51
COL9A1-204ENST00000370496 HLA-DQB1P01920 261 aa11.87□□□□□ -0.51
COL9A1-204ENST00000370496 NFYAP23511 347 aaPredicted RBP11.87□□□□□ -0.51
COL9A1-204ENST00000370496 CD1BP29016 333 aa11.87□□□□□ -0.51
COL9A1-204ENST00000370496 HNF4GQ14541 408 aa11.87□□□□□ -0.51
COL9A1-204ENST00000370496 RNASE12Q5GAN4 147 aaKnown RBP11.87□□□□□ -0.51
COL9A1-204ENST00000370496 OR2T10Q8NGZ9 312 aa11.87□□□□□ -0.51
COL9A1-204ENST00000370496 OR2T6Q8NHC8 308 aa11.87□□□□□ -0.51
COL9A1-204ENST00000370496 SPATA3Q8NHX4 192 aa11.87□□□□□ -0.51
COL9A1-204ENST00000370496 RBM14Q96PK6 669 aaKnown RBP11.87□□□□□ -0.51
COL9A1-204ENST00000370496 NABP2Q9BQ15 211 aa11.87□□□□□ -0.51
COL9A1-204ENST00000370496 SCPEP1Q9HB40 452 aa11.87□□□□□ -0.51
COL9A1-204ENST00000370496 ZNF736B4DX44 427 aaPredicted RBP11.86□□□□□ -0.51
COL9A1-204ENST00000370496 M0QZK8 103 aa11.86□□□□□ -0.51
COL9A1-204ENST00000370496 TSPAN9O75954 239 aa11.86□□□□□ -0.51
COL9A1-204ENST00000370496 TAS2R46P59540 309 aa11.86□□□□□ -0.51
COL9A1-204ENST00000370496 C3orf56Q8N813 242 aa11.86□□□□□ -0.51
COL9A1-204ENST00000370496 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.86□□□□□ -0.51
COL9A1-204ENST00000370496 C15orf40Q8WUR7 153 aa11.86□□□□□ -0.51
COL9A1-204ENST00000370496 DIRAS2Q96HU8 199 aa11.86□□□□□ -0.51
COL9A1-204ENST00000370496 EAF1Q96JC9 268 aaPredicted RBP11.86□□□□□ -0.51
COL9A1-204ENST00000370496 PRSS22Q9GZN4 317 aa11.86□□□□□ -0.51
COL9A1-204ENST00000370496 ANAPC10Q9UM13 185 aa11.86□□□□□ -0.51
COL9A1-204ENST00000370496 OR2W1Q9Y3N9 320 aa11.86□□□□□ -0.51
COL9A1-204ENST00000370496 CLPSL1A2RUU4 121 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 OR5H14A6NHG9 310 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 J3QRK9 145 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 M0R1X1 148 aa11.85□□□□□ -0.51
COL9A1-204ENST00000370496 SULT1C2O00338 296 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms