RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 IGKV1-16P04430 117 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 NQO1P15559 274 aaKnown RBP1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 CXCL2P19875 107 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 AGTR1P30556 359 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 RWDD2BP57060 319 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 TSPEAR-AS2P59090 65 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 FGF12P61328 243 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 HERVK_113P63121 156 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 SKP1P63208 163 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 SLC35A2P78381 396 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 DEFB103AP81534 67 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 ZNF117Q03924 483 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 TMEM267Q0VDI3 215 aaPredicted RBP1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 LRRC26Q2I0M4 334 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 HLA-DRB5Q30154 266 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 TMEM176BQ3YBM2 270 aaPredicted RBP1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 PCOTHQ58A44 107 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 LGALS9CQ6DKI2 356 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 CLEC6AQ6EIG7 209 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 RASL11AQ6T310 242 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 ATP5L2Q7Z4Y8 100 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 OR4C16Q8NGL9 310 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 ERMNQ8TAM6 284 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 STOML3Q8TAV4 291 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 SMIM12Q96EX1 92 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 ABHD14BQ96IU4 210 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 TBX5Q99593 518 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 CHMP4BQ9H444 224 aaKnown RBP1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 FAM206AQ9NX38 181 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 PUS1Q9Y606 427 aaKnown RBP eCLIP1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 STRCP1A6NGW2 1772 aa1.31□□□□□ -2.2
ECHDC1-201ENST00000368287 SLIT2O94813 1529 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 SCN9AQ15858 1988 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 DAPL1A0PJW8 107 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 LINC00862A6NCI5 91 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 OVOL1O14753 267 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 MRASO14807 208 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 COCHO43405 550 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 TRAPPC3O43617 180 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 IGLV3-27P01718 113 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 ATP5G1P05496 136 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 PET100P0DJ07 73 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 IFI30P13284 250 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 SLC25A16P16260 332 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 CXCL3P19876 107 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 F8A1P23610 371 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 CRYBB3P26998 211 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 CASQ1P31415 396 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 CD151P48509 253 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 EXOC3L4Q17RC7 722 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 TBC1D28Q2M2D7 210 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 KRTAP13-4Q3LI77 160 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 DNAL1Q4LDG9 190 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 CCDC112Q8NEF3 446 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 OR10A6Q8NH74 314 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 DNAJB3Q8WWF6 145 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 RBP7Q96R05 134 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 CDCA4Q9BXL8 241 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 MROQ9BYG7 248 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 TTTY12Q9BZ98 90 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 METTL9Q9H1A3 318 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 IMP3Q9NV31 184 aaKnown RBP1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 TP53TG1Q9Y2A0 90 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 FIS1Q9Y3D6 152 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 SNX10Q9Y5X0 201 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 SLX4Q8IY92 1834 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 NAV1Q8NEY1 1877 aa1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 NYNRINQ9P2P1 1898 aaKnown RBP1.3□□□□□ -2.2
ECHDC1-201ENST00000368287 IGHV3-73A0A0B4J1V6 119 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 KNCNA6PVL3 124 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 ATP8B1O43520 1251 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 STK16O75716 305 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 HBZP02008 142 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 CCL3P10147 92 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 OPRM1P35372 400 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 CRATP43155 626 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 LPAR6P43657 344 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 SERPINB10P48595 397 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 CDK9P50750 372 aaKnown RBP1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 HPCAP84074 193 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 ACSBG2Q5FVE4 666 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 LCN8Q6JVE9 175 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 SCGB1D4Q6XE38 83 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 PACRGLQ8N7B6 248 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 OR52E4Q8NGH9 312 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 OR51H1Q8NH63 302 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 C16orf78Q8WTQ4 265 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 MGLLQ99685 303 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 C7orf50Q9BRJ6 194 aaKnown RBP1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 ZNF426Q9BUY5 554 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 OR51B6Q9H340 312 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 UBQLN4Q9NRR5 601 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 NPATQ14207 1427 aa1.29□□□□□ -2.2
ECHDC1-201ENST00000368287 MUC21A0A0G2JKD1 596 aa1.28□□□□□ -2.2
ECHDC1-201ENST00000368287 MUC21A0A140T8X8 626 aa1.28□□□□□ -2.2
ECHDC1-201ENST00000368287 TINCRA0A1B0GVN0 87 aa1.28□□□□□ -2.2
ECHDC1-201ENST00000368287 GOLGA6L10A6NI86 522 aa1.28□□□□□ -2.2
ECHDC1-201ENST00000368287 FNDC10F2Z333 226 aa1.28□□□□□ -2.2
ECHDC1-201ENST00000368287 CCRL2O00421 344 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms