RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 NINJ1Q92982 152 aa10.43□□□□□ -0.74
PTPN7-202ENST00000367279 PFDN5Q99471 154 aa10.43□□□□□ -0.74
PTPN7-202ENST00000367279 SSX3Q99909 188 aa10.43□□□□□ -0.74
PTPN7-202ENST00000367279 CABLES2Q9BTV7 478 aa10.43□□□□□ -0.74
PTPN7-202ENST00000367279 RBKSQ9H477 322 aa10.43□□□□□ -0.74
PTPN7-202ENST00000367279 LRP5LA4QPB2 252 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 HIST1H2BKO60814 126 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 ZNF737O75373 536 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 HIST1H2BJP06899 126 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 HOXB1P14653 301 aaPredicted RBP10.42□□□□□ -0.74
PTPN7-202ENST00000367279 HOXA5P20719 270 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 HIST1H2BOP23527 126 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 HIST1H2BBP33778 126 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 HIST1H2BDP58876 126 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 HIST1H2BCP62807 126 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 MRPL49Q13405 166 aaKnown RBP10.42□□□□□ -0.74
PTPN7-202ENST00000367279 HIST2H2BEQ16778 126 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.42□□□□□ -0.74
PTPN7-202ENST00000367279 DHRS13Q6UX07 377 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 HIST1H2BHQ93079 126 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 HIST1H2BNQ99877 126 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 HIST1H2BMQ99879 126 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 SMIM7Q9BQ49 75 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 POLDIP2Q9Y2S7 368 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 ICE1Q9Y2F5 2266 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 IFNA1P01562 189 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 FABP4P15090 132 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 WDR25Q64LD2 544 aaPredicted RBP10.42□□□□□ -0.74
PTPN7-202ENST00000367279 S100PBPQ96BU1 408 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 ZPBPQ9BS86 351 aa10.42□□□□□ -0.74
PTPN7-202ENST00000367279 TNRC6BQ9UPQ9 1833 aaKnown RBP10.41□□□□□ -0.74
PTPN7-202ENST00000367279 KIAA1324LA8MWY0 1029 aaPredicted RBP10.41□□□□□ -0.74
PTPN7-202ENST00000367279 CLDN34H7C241 214 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 PPIHO43447 177 aaKnown RBP10.41□□□□□ -0.74
PTPN7-202ENST00000367279 AGFG2O95081 481 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 IGLV2-14P01704 120 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 TRGC1P0CF51 173 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 DEFA4P12838 97 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 TDGF1P13385 188 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 CDX1P47902 265 aaPredicted RBP10.41□□□□□ -0.74
PTPN7-202ENST00000367279 LINC00205P59089 165 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 FAM90A2PQ658T7 463 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 ZNF383Q8NA42 475 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 MRGPRDQ8TDS7 321 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 PKIBQ9C010 78 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 FAM234AQ9H0X4 552 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 GAB2Q9UQC2 676 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 KLF13Q9Y2Y9 288 aaPredicted RBP10.41□□□□□ -0.74
PTPN7-202ENST00000367279 A0A087WWC5 75 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 CD46P15529 392 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 DPPA3Q6W0C5 159 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 C1QL4Q86Z23 238 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 FRZBQ92765 325 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 BCL2L2Q92843 193 aaPredicted RBP10.41□□□□□ -0.74
PTPN7-202ENST00000367279 SNX22Q96L94 193 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 YPEL4Q96NS1 127 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 SIRT7Q9NRC8 400 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 RP1L1Q8IWN7 2480 aaPredicted RBP10.41□□□□□ -0.74
PTPN7-202ENST00000367279 TRGV5A0A0B4J1U4 118 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 A0A1W2PNU3 283 aaPredicted RBP10.41□□□□□ -0.74
PTPN7-202ENST00000367279 TNFSF15O95150 251 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 HAND1O96004 215 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 IGHV3-13P01766 116 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 IGHV3-7P01780 117 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 LRRC75BQ2VPJ9 315 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 TMEM41BQ5BJD5 291 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 PYY3Q5JQD4 70 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 ZNF497Q6ZNH5 498 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 TAF15Q92804 592 aaKnown RBP eCLIP10.41□□□□□ -0.74
PTPN7-202ENST00000367279 LSM10Q969L4 123 aaKnown RBP10.41□□□□□ -0.74
PTPN7-202ENST00000367279 WDYHV1Q96HA8 205 aa10.41□□□□□ -0.74
PTPN7-202ENST00000367279 WDR61Q9GZS3 305 aaKnown RBP10.41□□□□□ -0.74
PTPN7-202ENST00000367279 CISD1Q9NZ45 108 aaKnown RBP10.41□□□□□ -0.74
PTPN7-202ENST00000367279 TNRC6AQ8NDV7 1962 aaKnown RBP10.41□□□□□ -0.74
PTPN7-202ENST00000367279 NBEAQ8NFP9 2946 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 LY86O95711 162 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 PGA5P0DJD9 388 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 GTF3AQ92664 365 aaKnown RBP10.4□□□□□ -0.74
PTPN7-202ENST00000367279 ZDHHC16Q969W1 377 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 GALMQ96C23 342 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 VAX2Q9UIW0 290 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 HEATR1Q9H583 2144 aaKnown RBP10.4□□□□□ -0.74
PTPN7-202ENST00000367279 IFITM10A6NMD0 228 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 PSPNO60542 156 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 SOD3P08294 240 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 FGF7P21781 194 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 EDDM3AQ14507 147 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 FIP1L1Q6UN15 594 aaKnown RBP10.4□□□□□ -0.74
PTPN7-202ENST00000367279 MOB1BQ7L9L4 216 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 OR4F5Q8NH21 305 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 GATAD1Q8WUU5 269 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 EDARADDQ8WWZ3 215 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 OR4F4Q96R69 305 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 IER2Q9BTL4 223 aa10.4□□□□□ -0.74
PTPN7-202ENST00000367279 COLQQ9Y215 455 aaPredicted RBP10.4□□□□□ -0.74
PTPN7-202ENST00000367279 TMEM265A0A087WTH1 108 aa10.39□□□□□ -0.75
PTPN7-202ENST00000367279 PIGBOS1A0A0B4J2F0 54 aa10.39□□□□□ -0.75
PTPN7-202ENST00000367279 LNP1A1A4G5 178 aa10.39□□□□□ -0.75
PTPN7-202ENST00000367279 SMCO3A2RU48 225 aa10.39□□□□□ -0.75
PTPN7-202ENST00000367279 RNF212BA8MTL3 300 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms