RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 IER3IP1Q9Y5U9 82 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 FAM87AP0C7U9 286 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 ERVK11-1P61568 191 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 KLRF1Q9NZS2 232 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 MAP2P11137 1827 aaKnown RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM238C9JI98 176 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 SP1P08047 785 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 PI3P19957 117 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 DLX2Q07687 328 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-207ENST00000367255 DUSP13Q9UII6 198 aa3.27□□□□□ -1.89
SYNE1-207ENST00000367255 AHCTF1Q8WYP5 2266 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 DIRC3C9JPN6 131 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 SRD5A2P31213 254 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 TBC1D28Q2M2D7 210 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 TEX43Q6ZNM6 134 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 RNF152Q8N8N0 203 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 SLC25A37Q9NYZ2 338 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 TSPAN13O95857 204 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 SLC25A35Q3KQZ1 300 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF324BQ6AW86 544 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF324O75467 553 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-207ENST00000367255 CAPZBP47756 277 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 MRPL2Q5T653 305 aaKnown RBP3.26□□□□□ -1.89
SYNE1-207ENST00000367255 FAM27BQ5VT28 67 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 COQ2Q96H96 371 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 EAF1Q96JC9 268 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-207ENST00000367255 CD5LO43866 347 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 FCGR3AP08637 254 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 IGFBP4P22692 258 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 FABP5Q01469 135 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 PRTFDC1Q9NRG1 225 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 RARRES3Q9UL19 164 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 SLC25A18Q9H1K4 315 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 FGF21Q9NSA1 209 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 SPINK4O60575 86 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 COX20Q5RI15 118 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 GFI1BQ5VTD9 330 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 CLUHP3Q96NS8 147 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 MYOM1P52179 1685 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 A0A1W2PPC4 97 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM267Q0VDI3 215 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-207ENST00000367255 FNDC7Q5VTL7 733 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 SLC16A11Q8NCK7 471 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 C3orf80F5H4A9 247 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 ELNP15502 786 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 CST9LP1Q5W188 147 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 FAM103A1Q9BTL3 118 aaKnown RBP3.26□□□□□ -1.89
SYNE1-207ENST00000367255 V9GYY9 64 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 CMC4P56277 68 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-207ENST00000367255 TSKUQ8WUA8 353 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF430Q9H8G1 570 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-207ENST00000367255 M0R135 149 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF799Q96GE5 643 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 KIR2DL5BA0A0G2JN68 375 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 KIR2DL5BA0A0G2JPC4 375 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 A0A0J9YXY3 114 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 DPRXA6NFQ7 191 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 CD3DP04234 171 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 PPP1CCP36873 323 aaKnown RBP3.26□□□□□ -1.89
SYNE1-207ENST00000367255 RPL30P62888 115 aaKnown RBP3.26□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF252P-AS1Q0IIN9 211 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 LINC00303Q3SY05 128 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 KIR2DL5AQ8N109 375 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 INSL5Q9Y5Q6 135 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 NME2P1O60361 137 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 C10orf111Q8N326 155 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 NDUFC2-KCTD14E9PQ53 114 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 SNRPNP63162 240 aaKnown RBP3.26□□□□□ -1.89
SYNE1-207ENST00000367255 NMNAT3Q96T66 252 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 SDHCQ99643 169 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-207ENST00000367255 TIAF1O95411 115 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 IDSB3KWA1 339 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 SPINT1O43278 529 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 UTF1Q5T230 341 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 IL21Q9HBE4 155 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 KLRC4-KLRK1H3BQV0 150 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 CDAP32320 146 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 WBP2Q969T9 261 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 PXMP4Q9Y6I8 212 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 PLPP3O14495 311 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 IGHV2-70P01814 119 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 YPEL3P61236 119 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-207ENST00000367255 ATP23Q9Y6H3 246 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 INS-IGF2F8WCM5 200 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 COX7A2P2O60397 106 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 HIGD1BQ9P298 99 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 MOSPD3O75425 235 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 LINC01551Q86U37 167 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 RPEQ96AT9 228 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 RNF115Q9Y4L5 304 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 SPTAN1Q13813 2472 aaKnown RBP3.26□□□□□ -1.89
SYNE1-207ENST00000367255 ETV2O00321 342 aaPredicted RBP3.26□□□□□ -1.89
SYNE1-207ENST00000367255 IFITM3Q01628 133 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 GAB4Q2WGN9 574 aa3.26□□□□□ -1.89
SYNE1-207ENST00000367255 C3orf85A0A1B0GTC6 90 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 MYADML2A6NDP7 307 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 FSTL3O95633 263 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 PAPPAQ13219 1627 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 IGHV2OR16-5A0A0B4J2B6 119 aa3.25□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM189A5PLL7 270 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms