RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 DUXBA0A1W2PPF3 345 aa17.26■□□□□ 0.35
COL13A1-202ENST00000357811 TRGC2P03986 189 aa17.26■□□□□ 0.35
COL13A1-202ENST00000357811 CD200P41217 278 aa17.26■□□□□ 0.35
COL13A1-202ENST00000357811 PPP1CBP62140 327 aa17.26■□□□□ 0.35
COL13A1-202ENST00000357811 FGFRL1Q8N441 504 aa17.26■□□□□ 0.35
COL13A1-202ENST00000357811 OR52L2PQ8NGH6 319 aa17.26■□□□□ 0.35
COL13A1-202ENST00000357811 RAB40CQ96S21 281 aa17.26■□□□□ 0.35
COL13A1-202ENST00000357811 SSX3Q99909 188 aa17.26■□□□□ 0.35
COL13A1-202ENST00000357811 RTL8AQ9BWD3 113 aa17.26■□□□□ 0.35
COL13A1-202ENST00000357811 TOLLIPQ9H0E2 274 aa17.26■□□□□ 0.35
COL13A1-202ENST00000357811 TMPRSS5Q9H3S3 457 aa17.26■□□□□ 0.35
COL13A1-202ENST00000357811 RBMXL2O75526 392 aaKnown RBP17.25■□□□□ 0.35
COL13A1-202ENST00000357811 SRSF7Q16629 238 aaKnown RBP eCLIP17.25■□□□□ 0.35
COL13A1-202ENST00000357811 SPNS3Q6ZMD2 512 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 ZNF525Q8N782 197 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 CNEP1R1Q8N9A8 125 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 RCC1LQ96I51 464 aaKnown RBP17.25■□□□□ 0.35
COL13A1-202ENST00000357811 ZPBPQ9BS86 351 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 UNKLQ9H9P5 680 aaKnown RBP17.25■□□□□ 0.35
COL13A1-202ENST00000357811 DMRT1Q9Y5R6 373 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 A0A1B0GW64 132 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 IGHV3-13P01766 116 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 IGHV3-7P01780 117 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 TBC1D28Q2M2D7 210 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 DEFB123Q8N688 67 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 RBMXL1Q96E39 390 aaKnown RBP17.25■□□□□ 0.35
COL13A1-202ENST00000357811 MEGF10Q96KG7 1140 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 YPEL4Q96NS1 127 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 OR2D2Q9H210 308 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 CLN8Q9UBY8 286 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 HSPB1P04792 205 aaKnown RBP17.25■□□□□ 0.35
COL13A1-202ENST00000357811 MMP9P14780 707 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 BMP5P22003 454 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 ZNF880Q6PDB4 577 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 ZNF383Q8NA42 475 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 CDH20Q9HBT6 801 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 DOK5Q9P104 306 aa17.25■□□□□ 0.35
COL13A1-202ENST00000357811 TRGV5A0A0B4J1U4 118 aa17.24■□□□□ 0.35
COL13A1-202ENST00000357811 BTBD17A6NE02 478 aa17.24■□□□□ 0.35
COL13A1-202ENST00000357811 KLRC4-KLRK1H3BQV0 150 aa17.24■□□□□ 0.35
COL13A1-202ENST00000357811 MPV17P39210 176 aa17.24■□□□□ 0.35
COL13A1-202ENST00000357811 ZNF497Q6ZNH5 498 aa17.24■□□□□ 0.35
COL13A1-202ENST00000357811 DMRTC2Q8IXT2 367 aaPredicted RBP17.24■□□□□ 0.35
COL13A1-202ENST00000357811 IL22RA2Q969J5 263 aa17.24■□□□□ 0.35
COL13A1-202ENST00000357811 CABLES2Q9BTV7 478 aa17.24■□□□□ 0.35
COL13A1-202ENST00000357811 DDA1Q9BW61 102 aa17.24■□□□□ 0.35
COL13A1-202ENST00000357811 LOC102723971A0A1B0GUV8 181 aa17.24■□□□□ 0.35
COL13A1-202ENST00000357811 SMPD2O60906 423 aa17.24■□□□□ 0.35
COL13A1-202ENST00000357811 UBE2NP61088 152 aaKnown RBP17.24■□□□□ 0.35
COL13A1-202ENST00000357811 RPL30P62888 115 aaKnown RBP17.24■□□□□ 0.35
COL13A1-202ENST00000357811 SRSF6Q13247 344 aaKnown RBP17.24■□□□□ 0.35
COL13A1-202ENST00000357811 KDF1Q8NAX2 398 aaPredicted RBP17.24■□□□□ 0.35
COL13A1-202ENST00000357811 S100PBPQ96BU1 408 aa17.24■□□□□ 0.35
COL13A1-202ENST00000357811 ABHD14BQ96IU4 210 aa17.24■□□□□ 0.35
COL13A1-202ENST00000357811 C19orf67A6NJJ6 358 aa17.23■□□□□ 0.35
COL13A1-202ENST00000357811 PSG7Q13046 419 aa17.23■□□□□ 0.35
COL13A1-202ENST00000357811 NECAP1Q8NC96 275 aa17.23■□□□□ 0.35
COL13A1-202ENST00000357811 MRGPRDQ8TDS7 321 aa17.23■□□□□ 0.35
COL13A1-202ENST00000357811 TMEM9BQ9NQ34 198 aa17.23■□□□□ 0.35
COL13A1-202ENST00000357811 HBE1P02100 147 aa17.23■□□□□ 0.35
COL13A1-202ENST00000357811 ZDHHC16Q969W1 377 aa17.23■□□□□ 0.35
COL13A1-202ENST00000357811 TREM2Q9NZC2 230 aa17.23■□□□□ 0.35
COL13A1-202ENST00000357811 KLF13Q9Y2Y9 288 aaPredicted RBP17.23■□□□□ 0.35
COL13A1-202ENST00000357811 IFITM10A6NMD0 228 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 PRAMEF6Q5VXH4 476 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 FAM90A2PQ658T7 463 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 GPR87Q9BY21 358 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 RBKSQ9H477 322 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 SLC25A22Q9H936 323 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 MSL2Q9HCI7 577 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 IGKV1D-33P01593 117 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 IGKV1-33P01594 117 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 CEACAM1P13688 526 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 GABRA2P47869 451 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 OR8G1Q15617 311 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 PYY3Q5JQD4 70 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 DCTN5Q9BTE1 182 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 PKIBQ9C010 78 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 INTS1Q8N201 2190 aaKnown RBP17.22■□□□□ 0.35
COL13A1-202ENST00000357811 BCL2P10415 239 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 IGHV1-2P23083 117 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 IL2RGP31785 369 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 FABP6P51161 128 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 KHDC3LQ587J8 217 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 GATAD1Q8WUU5 269 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 NANOS1Q8WY41 292 aaKnown RBP17.22■□□□□ 0.35
COL13A1-202ENST00000357811 POM121Q96HA1 1249 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 GP6Q9HCN6 339 aa17.22■□□□□ 0.35
COL13A1-202ENST00000357811 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.21■□□□□ 0.35
COL13A1-202ENST00000357811 SH2D1BO14796 132 aa17.21■□□□□ 0.35
COL13A1-202ENST00000357811 PPIHO43447 177 aaKnown RBP17.21■□□□□ 0.35
COL13A1-202ENST00000357811 HAND1O96004 215 aa17.21■□□□□ 0.35
COL13A1-202ENST00000357811 CD46P15529 392 aa17.21■□□□□ 0.35
COL13A1-202ENST00000357811 SLC38A11Q08AI6 406 aa17.21■□□□□ 0.35
COL13A1-202ENST00000357811 LIN7CQ9NUP9 197 aaKnown RBP17.21■□□□□ 0.35
COL13A1-202ENST00000357811 METRNQ9UJH8 293 aa17.21■□□□□ 0.35
COL13A1-202ENST00000357811 DMXL2Q8TDJ6 3036 aa17.21■□□□□ 0.35
COL13A1-202ENST00000357811 MAP1LC3B2A6NCE7 125 aa17.21■□□□□ 0.35
COL13A1-202ENST00000357811 MDH2P40926 338 aaKnown RBP17.21■□□□□ 0.35
COL13A1-202ENST00000357811 ZNF766Q5HY98 468 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms