RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 F8VVB4 439 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 F8VWA3 439 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 FABP7O15540 132 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 TUSC2O75896 110 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 OR2A4O95047 310 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 IGHV1-46P01743 117 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 HLA-AP01891 365 aaKnown RBP5.73□□□□□ -1.49
VPS13A-201ENST00000355766 C1QBP02746 253 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 OR4A8P0C604 315 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 OR4E1P0C645 316 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 GSTT2P0CG29 244 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 DAOP14920 347 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 ZNF44P15621 663 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 GLRA1P23415 457 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 ZBTB25P24278 435 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 RND3P61587 244 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 HLA-DRB3P79483 266 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 TNFAIP6P98066 277 aaPredicted RBP5.73□□□□□ -1.49
VPS13A-201ENST00000355766 SRSF4Q08170 494 aaKnown RBP5.73□□□□□ -1.49
VPS13A-201ENST00000355766 DHRS2Q13268 280 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 ZFP69Q49AA0 526 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 SCGB2B2Q4G0G5 96 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 C4orf46Q504U0 113 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 DMRTC1Q5HYR2 192 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 AADACL3Q5VUY0 350 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 TEX36Q5VZQ5 186 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 FAAP20Q6NZ36 180 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 LYG2Q86SG7 212 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 TEX29Q8N6K0 151 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 CCDC71LQ8N9Z2 235 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 MRPL30Q8TCC3 161 aaKnown RBP5.73□□□□□ -1.49
VPS13A-201ENST00000355766 NEK7Q8TDX7 302 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 NTN5Q8WTR8 489 aaPredicted RBP5.73□□□□□ -1.49
VPS13A-201ENST00000355766 MRGPRFQ96AM1 343 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 GALNT14Q96FL9 552 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 SDSLQ96GA7 329 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 HYLS1Q96M11 299 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 OR2A7Q96R45 310 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 PHB2Q99623 299 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 RANBP3Q9H6Z4 567 aaPredicted RBP5.73□□□□□ -1.49
VPS13A-201ENST00000355766 TMEM165Q9HC07 324 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 CHMP1AQ9HD42 196 aaPredicted RBP5.73□□□□□ -1.49
VPS13A-201ENST00000355766 HIF1ANQ9NWT6 349 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 C1orf123Q9NWV4 160 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 RNF7Q9UBF6 113 aa5.73□□□□□ -1.49
VPS13A-201ENST00000355766 C14orf166Q9Y224 244 aaKnown RBP5.73□□□□□ -1.49
VPS13A-201ENST00000355766 TRBV6-7A0A0A0MS04 114 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 hCG_1807616A0A1W2PRN6 198 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 H0YL77 283 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.72□□□□□ -1.49
VPS13A-201ENST00000355766 MGST3O14880 152 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 NDUFA2O43678 99 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 ZNF737O75373 536 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 SLC22A5O76082 557 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 PMP2P02689 132 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 GRPP07492 148 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 MSMBP08118 114 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 IRF2P14316 349 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 ANXA7P20073 488 aaKnown RBP5.72□□□□□ -1.49
VPS13A-201ENST00000355766 C4BPBP20851 252 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 S100GP29377 79 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 HERV-K104P61576 105 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 FGL1Q08830 312 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 HMGN3Q15651 99 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 C21orf62-AS1Q17RA5 79 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 LY6G6FQ5SQ64 297 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 LIN54Q6MZP7 749 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 Q6YL49 198 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 KCTD9Q7L273 389 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 ZNF561Q8N587 486 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 GCSAMQ8N6F7 178 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 LRTM2Q8N967 370 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 OR5D13Q8NGL4 314 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 OR5M8Q8NGP6 311 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 COQ8AQ8NI60 647 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 LRRC29Q8WV35 223 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 SNX22Q96L94 193 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 ZNF436Q9C0F3 470 aaPredicted RBP5.72□□□□□ -1.49
VPS13A-201ENST00000355766 RAB1BQ9H0U4 201 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 WDR13Q9H1Z4 485 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 C5orf66Q9H5L9 145 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 UNKLQ9H9P5 680 aaKnown RBP5.72□□□□□ -1.49
VPS13A-201ENST00000355766 SAP30LQ9HAJ7 183 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 LPAR2Q9HBW0 351 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 RAB18Q9NP72 206 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 KCNIP1Q9NZI2 227 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 ZNF69Q9UC07 566 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 ZNF222Q9UK12 451 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 FLVCR2Q9UPI3 526 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 VSIG4Q9Y279 399 aa5.72□□□□□ -1.49
VPS13A-201ENST00000355766 LOC105371242A0A075B767 164 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 DUXBA0A1W2PPF3 345 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 C9orf170A2RU37 121 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 OOEPA6NGQ2 149 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 K7N7A8 449 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 ITGB1BP1O14713 200 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 SFT2D2O95562 160 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 PPYP01298 95 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 ZNF728P0DKX0 622 aa5.71□□□□□ -1.5
VPS13A-201ENST00000355766 GZMHP20718 246 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms