RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 A0A0B4J2A0 478 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 C3orf85A0A1B0GTC6 90 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 C17orf98A8MV24 154 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 LIPFP07098 398 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 RAB7AP51149 207 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 LMO4P61968 165 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 C2orf68Q2NKX9 166 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 SP6Q3SY56 376 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 ZNF439Q8NDP4 499 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 SUCNR1Q9BXA5 334 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 PRR13Q9NZ81 148 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 SHPKQ9UHJ6 478 aa12.81□□□□□ -0.36
CTSA-202ENST00000354880 ARHGAP32A7KAX9 2087 aa12.8□□□□□ -0.36
CTSA-202ENST00000354880 DBX1A6NMT0 343 aa12.8□□□□□ -0.36
CTSA-202ENST00000354880 GOSR2O14653 212 aa12.8□□□□□ -0.36
CTSA-202ENST00000354880 SLC31A2O15432 143 aa12.8□□□□□ -0.36
CTSA-202ENST00000354880 IGHV1-8P0DP01 117 aa12.8□□□□□ -0.36
CTSA-202ENST00000354880 DSCR9P59020 149 aa12.8□□□□□ -0.36
CTSA-202ENST00000354880 TMEM187Q14656 261 aa12.8□□□□□ -0.36
CTSA-202ENST00000354880 CT45A1Q5HYN5 189 aa12.8□□□□□ -0.36
CTSA-202ENST00000354880 HIST2H2BCQ6DN03 193 aa12.8□□□□□ -0.36
CTSA-202ENST00000354880 C11orf42Q8N5U0 333 aa12.8□□□□□ -0.36
CTSA-202ENST00000354880 CT45A3Q8NHU0 189 aa12.8□□□□□ -0.36
CTSA-202ENST00000354880 GLYATL2Q8WU03 294 aa12.8□□□□□ -0.36
CTSA-202ENST00000354880 FYTTD1Q96QD9 318 aaKnown RBP12.8□□□□□ -0.36
CTSA-202ENST00000354880 TP53RKQ96S44 253 aa12.8□□□□□ -0.36
CTSA-202ENST00000354880 IFI27L2Q9H2X8 130 aa12.8□□□□□ -0.36
CTSA-202ENST00000354880 SDHAF2Q9NX18 166 aa12.8□□□□□ -0.36
CTSA-202ENST00000354880 VWC2LB2RUY7 222 aa12.79□□□□□ -0.36
CTSA-202ENST00000354880 RBP4P02753 201 aa12.79□□□□□ -0.36
CTSA-202ENST00000354880 HNRNPCP07910 306 aaKnown RBP eCLIP12.79□□□□□ -0.363e-8■■■■□ 24.7
CTSA-202ENST00000354880 F2RP25116 425 aa12.79□□□□□ -0.36
CTSA-202ENST00000354880 GPR12P47775 334 aa12.79□□□□□ -0.36
CTSA-202ENST00000354880 GNG10P50151 68 aa12.79□□□□□ -0.36
CTSA-202ENST00000354880 Q3ZCU0 254 aa12.79□□□□□ -0.36
CTSA-202ENST00000354880 OR51H1Q8NH63 302 aa12.79□□□□□ -0.36
CTSA-202ENST00000354880 C5orf30Q96GV9 206 aa12.79□□□□□ -0.36
CTSA-202ENST00000354880 ZNF436Q9C0F3 470 aaPredicted RBP12.79□□□□□ -0.36
CTSA-202ENST00000354880 FASNP49327 2511 aaKnown RBP12.79□□□□□ -0.36
CTSA-202ENST00000354880 MED13LQ71F56 2210 aa12.79□□□□□ -0.36
CTSA-202ENST00000354880 A0A1W2PPE3 182 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 LIAT1Q6ZQX7 453 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 SLC25A48Q6ZT89 311 aaKnown RBP12.78□□□□□ -0.36
CTSA-202ENST00000354880 TMEM222Q9H0R3 208 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 ONECUT1Q9UBC0 465 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 SESN1Q9Y6P5 492 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 NAV2Q8IVL1 2488 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 IGHV4-30-2A0A087WSY4 118 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 A0A087X0M5 115 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 A0A1B0GX30 115 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 hCG_1809904A0A1W2PP81 198 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 A0A1W2PPE2 198 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 A0A1W2PR64 198 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 A0A1W2PRV1 198 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 KIAA1324LA8MWY0 1029 aaPredicted RBP12.78□□□□□ -0.36
CTSA-202ENST00000354880 A8MXK9 166 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 H0Y980 276 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 B3GALNT1O75752 331 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 SIX6O95475 246 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 HLA-GP17693 338 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 ZFP36P26651 326 aaKnown RBP12.78□□□□□ -0.36
CTSA-202ENST00000354880 H2BFSP57053 126 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 TCTE3Q8IZS6 198 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 OR5M8Q8NGP6 311 aa12.78□□□□□ -0.36
CTSA-202ENST00000354880 MSI2Q96DH6 328 aaKnown RBP12.78□□□□□ -0.36
CTSA-202ENST00000354880 BEX4Q9NWD9 120 aaPredicted RBP12.78□□□□□ -0.36
CTSA-202ENST00000354880 RNF212BA8MTL3 300 aa12.77□□□□□ -0.37
CTSA-202ENST00000354880 BOLA2-SMG1P6H3BVE0 249 aa12.77□□□□□ -0.37
CTSA-202ENST00000354880 CCSO14618 274 aa12.77□□□□□ -0.37
CTSA-202ENST00000354880 RAB29O14966 203 aa12.77□□□□□ -0.37
CTSA-202ENST00000354880 OR2A4O95047 310 aa12.77□□□□□ -0.37
CTSA-202ENST00000354880 DNASE1P24855 282 aa12.77□□□□□ -0.37
CTSA-202ENST00000354880 SRPXP78539 464 aa12.77□□□□□ -0.37
CTSA-202ENST00000354880 EIF4EBP1Q13541 118 aaPredicted RBP12.77□□□□□ -0.37
CTSA-202ENST00000354880 BTNL3Q6UXE8 466 aa12.77□□□□□ -0.37
CTSA-202ENST00000354880 LRTM2Q8N967 370 aa12.77□□□□□ -0.37
CTSA-202ENST00000354880 OR2A7Q96R45 310 aa12.77□□□□□ -0.37
CTSA-202ENST00000354880 CHIAQ9BZP6 476 aa12.77□□□□□ -0.37
CTSA-202ENST00000354880 TMEM133Q9H2Q1 129 aa12.77□□□□□ -0.37
CTSA-202ENST00000354880 RAB18Q9NP72 206 aa12.77□□□□□ -0.37
CTSA-202ENST00000354880 LIN7CQ9NUP9 197 aaKnown RBP12.77□□□□□ -0.37
CTSA-202ENST00000354880 PIPOXQ9P0Z9 390 aa12.77□□□□□ -0.37
CTSA-202ENST00000354880 GAB2Q9UQC2 676 aa12.77□□□□□ -0.37
CTSA-202ENST00000354880 IGHV4-61A0A0C4DH41 118 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 PROP1O75360 226 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 UCP1P25874 307 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 LCN2P80188 198 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 CATR1Q13166 79 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 CLEC12BQ2HXU8 276 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 DEFB113Q30KQ7 82 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 DCAF12L2Q5VW00 463 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 ZNF66Q6ZN08 573 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 LGI3Q8N145 548 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 LYG1Q8N1E2 194 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 C8orf31Q8N9H6 132 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.76□□□□□ -0.37
CTSA-202ENST00000354880 DMRTB1Q96MA1 342 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 HSD17B10Q99714 261 aaKnown RBP12.76□□□□□ -0.37
CTSA-202ENST00000354880 SAA2-SAA4A0A096LPE2 208 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 FAM25EA8MYX2 175 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms