RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 OR10G9Q8NGN4 311 aa11.29□□□□□ -0.6
IFT88-202ENST00000351808 OR10G7Q8NGN6 311 aa11.29□□□□□ -0.6
IFT88-202ENST00000351808 IGKV1D-13A0A0B4J2D9 117 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 LOC102725191A0A1B0GVB3 256 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 IGKV1-13P0DP09 117 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 HNRNPA2B1P22626 353 aaKnown RBP11.28□□□□□ -0.6
IFT88-202ENST00000351808 APOBEC3AP31941 199 aaPredicted RBP11.28□□□□□ -0.6
IFT88-202ENST00000351808 ATP5G3P48201 142 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 HBG1P69891 147 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 HBG2P69892 147 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 SPANXN5Q5MJ07 72 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 H1FNTQ75WM6 255 aaPredicted RBP11.28□□□□□ -0.6
IFT88-202ENST00000351808 ZDHHC23Q8IYP9 409 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 SLC39A11Q8N1S5 342 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 PNRC2Q9NPJ4 139 aaKnown RBP11.28□□□□□ -0.6
IFT88-202ENST00000351808 CCL28Q9NRJ3 127 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 SOHLH2Q9NX45 425 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 NOTCH4Q99466 2003 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 TMEM131Q92545 1883 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 F5H5K5 113 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 TMPRSS2O15393 492 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 IGLL1P15814 213 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 NTF3P20783 257 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 WASP42768 502 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 CARD17Q5XLA6 110 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 VWA1Q6PCB0 445 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 ASCL4Q6XD76 172 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 WDR5BQ86VZ2 330 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 OR10G8Q8NGN5 311 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 NEUROG1Q92886 237 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 CLEC7AQ9BXN2 247 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 WASHC3Q9Y3C0 194 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 C5orf42Q9H799 3197 aa11.28□□□□□ -0.6
IFT88-202ENST00000351808 TRBV20OR9-2A0A075B6H5 130 aa11.27□□□□□ -0.6
IFT88-202ENST00000351808 SYNGR2O43760 224 aa11.27□□□□□ -0.6
IFT88-202ENST00000351808 CA2P00918 260 aa11.27□□□□□ -0.6
IFT88-202ENST00000351808 OR2M7Q8NG81 312 aa11.27□□□□□ -0.6
IFT88-202ENST00000351808 ST6GALNAC6Q969X2 333 aa11.27□□□□□ -0.6
IFT88-202ENST00000351808 KCNS1Q96KK3 526 aa11.27□□□□□ -0.6
IFT88-202ENST00000351808 PNO1Q9NRX1 252 aaKnown RBP11.27□□□□□ -0.6
IFT88-202ENST00000351808 SELENOKQ9Y6D0 94 aa11.27□□□□□ -0.6
IFT88-202ENST00000351808 G3V3Y1 287 aa11.27□□□□□ -0.61
IFT88-202ENST00000351808 ZNF324O75467 553 aaPredicted RBP11.27□□□□□ -0.61
IFT88-202ENST00000351808 S1PR2O95136 353 aa11.27□□□□□ -0.61
IFT88-202ENST00000351808 CLDN15P56746 228 aa11.27□□□□□ -0.61
IFT88-202ENST00000351808 IGLV3-21P80748 117 aaPredicted RBP11.27□□□□□ -0.61
IFT88-202ENST00000351808 PSG9Q00887 426 aa11.27□□□□□ -0.61
IFT88-202ENST00000351808 FAM58AQ8N1B3 248 aa11.27□□□□□ -0.61
IFT88-202ENST00000351808 DIDO1Q9BTC0 2240 aaKnown RBP11.27□□□□□ -0.61
IFT88-202ENST00000351808 A0A1W2PP55 124 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 RAB29O14966 203 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 SPINK4O60575 86 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 DHRS3O75911 302 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 IGHG1P01857 330 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 PRSS12P56730 875 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 ARF1P84077 181 aaKnown RBP11.26□□□□□ -0.61
IFT88-202ENST00000351808 CFAP161Q6P656 301 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 VASH2Q86V25 355 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 BORCS7Q96B45 105 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 GMPPAQ96IJ6 420 aaPredicted RBP11.26□□□□□ -0.61
IFT88-202ENST00000351808 COL4A6Q14031 1691 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 RANBP2P49792 3224 aaKnown RBP11.26□□□□□ -0.61
IFT88-202ENST00000351808 NUDT3O95989 172 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 TIMP3P35625 211 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 CCR5P51681 352 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 FUT6P51993 359 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 ARF6P62330 175 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 BATF2Q8N1L9 274 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 PATE1Q8WXA2 126 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 PP6455Q8WZ26 134 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 ZNF442Q9H7R0 627 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 CACNG5Q9UF02 275 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 MED12Q93074 2177 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 TRAV9-2A0A087WT02 112 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 SLC31A1O15431 190 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 OR7C2O60412 319 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 ADH1BP00325 375 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 LGALS7P47929 136 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 CLRN1P58418 232 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 SLC38A11Q08AI6 406 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 FAM71F2Q6NXP2 309 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 OR5D13Q8NGL4 314 aa11.26□□□□□ -0.61
IFT88-202ENST00000351808 KIAA1549Q9HCM3 1950 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 IGKV1-27A0A075B6S5 117 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 PRSS38A1L453 326 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 OTOL1A6NHN0 477 aaPredicted RBP11.25□□□□□ -0.61
IFT88-202ENST00000351808 SLC22A20A6NK97 555 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 PIAS2O75928 621 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 C17orf99Q6UX52 265 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 OR51H1Q8NH63 302 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 OCC1Q8TAD7 63 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 SGCZQ96LD1 299 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 HRASLS2Q9NWW9 162 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 NAT8BQ9UHF3 227 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 CD207Q9UJ71 328 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 TRAV8-6A0A0B4J262 113 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 MUC21A0A0G2JKD1 596 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 MUC21A0A140T8X8 626 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 C2orf72A6NCS6 295 aa11.25□□□□□ -0.61
IFT88-202ENST00000351808 C17orf112F2Z3M2 114 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms