RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 OXA1LQ15070 435 aa11.25□□□□□ -0.61
SEC13-202ENST00000350697 CENPSQ8N2Z9 138 aa11.25□□□□□ -0.61
SEC13-202ENST00000350697 POC5Q8NA72 575 aa11.25□□□□□ -0.61
SEC13-202ENST00000350697 OR10J5Q8NHC4 309 aa11.25□□□□□ -0.61
SEC13-202ENST00000350697 EDARADDQ8WWZ3 215 aa11.25□□□□□ -0.61
SEC13-202ENST00000350697 CHIAQ9BZP6 476 aa11.25□□□□□ -0.61
SEC13-202ENST00000350697 TOLLIPQ9H0E2 274 aa11.25□□□□□ -0.61
SEC13-202ENST00000350697 VPREB3Q9UKI3 123 aa11.25□□□□□ -0.61
SEC13-202ENST00000350697 TRBV6-7A0A0A0MS04 114 aa11.24□□□□□ -0.61
SEC13-202ENST00000350697 HSD17B6O14756 317 aa11.24□□□□□ -0.61
SEC13-202ENST00000350697 CTDSPLO15194 276 aa11.24□□□□□ -0.61
SEC13-202ENST00000350697 CTXN2P0C2S0 81 aa11.24□□□□□ -0.61
SEC13-202ENST00000350697 BRS3P32247 399 aa11.24□□□□□ -0.61
SEC13-202ENST00000350697 ZNF137PP52743 207 aa11.24□□□□□ -0.61
SEC13-202ENST00000350697 ZNF816Q0VGE8 651 aaPredicted RBP11.24□□□□□ -0.61
SEC13-202ENST00000350697 Q6ZNX1 250 aa11.24□□□□□ -0.61
SEC13-202ENST00000350697 HOGA1Q86XE5 327 aa11.24□□□□□ -0.61
SEC13-202ENST00000350697 SNX29P2Q8IUI4 249 aa11.24□□□□□ -0.61
SEC13-202ENST00000350697 LYG1Q8N1E2 194 aa11.24□□□□□ -0.61
SEC13-202ENST00000350697 GVQW1Q8N7I0 195 aa11.24□□□□□ -0.61
SEC13-202ENST00000350697 BEST4Q8NFU0 473 aa11.24□□□□□ -0.61
SEC13-202ENST00000350697 FAM216AQ8WUB2 273 aa11.24□□□□□ -0.61
SEC13-202ENST00000350697 GCDHQ92947 438 aaPredicted RBP11.24□□□□□ -0.61
SEC13-202ENST00000350697 ST6GALNAC6Q969X2 333 aa11.24□□□□□ -0.61
SEC13-202ENST00000350697 ANXA10Q9UJ72 324 aa11.24□□□□□ -0.61
SEC13-202ENST00000350697 COL6A5A8TX70 2615 aa11.23□□□□□ -0.61
SEC13-202ENST00000350697 GAPDHP04406 335 aaKnown RBP11.23□□□□□ -0.61
SEC13-202ENST00000350697 LPLP06858 475 aa11.23□□□□□ -0.61
SEC13-202ENST00000350697 RAB13P51153 203 aa11.23□□□□□ -0.61
SEC13-202ENST00000350697 IFITM3Q01628 133 aa11.23□□□□□ -0.61
SEC13-202ENST00000350697 ASAH1Q13510 395 aa11.23□□□□□ -0.61
SEC13-202ENST00000350697 DIAPH2-AS1Q14236 149 aa11.23□□□□□ -0.61
SEC13-202ENST00000350697 MZT2BQ6NZ67 158 aa11.23□□□□□ -0.61
SEC13-202ENST00000350697 OR8H3Q8N146 312 aa11.23□□□□□ -0.61
SEC13-202ENST00000350697 PIFOQ8TCI5 191 aa11.23□□□□□ -0.61
SEC13-202ENST00000350697 TMEM158Q8WZ71 300 aa11.23□□□□□ -0.61
SEC13-202ENST00000350697 SDHCQ99643 169 aaPredicted RBP11.23□□□□□ -0.61
SEC13-202ENST00000350697 GINS4Q9BRT9 223 aa11.23□□□□□ -0.61
SEC13-202ENST00000350697 PARP12Q9H0J9 701 aaKnown RBP11.23□□□□□ -0.61
SEC13-202ENST00000350697 C11orf54Q9H0W9 315 aaPredicted RBP11.23□□□□□ -0.61
SEC13-202ENST00000350697 IFI27L2Q9H2X8 130 aa11.23□□□□□ -0.61
SEC13-202ENST00000350697 GHITMQ9H3K2 345 aa11.23□□□□□ -0.61
SEC13-202ENST00000350697 SCPEP1Q9HB40 452 aa11.23□□□□□ -0.61
SEC13-202ENST00000350697 IFT46Q9NQC8 304 aa11.23□□□□□ -0.61
SEC13-202ENST00000350697 RDH8Q9NYR8 311 aa11.23□□□□□ -0.61
SEC13-202ENST00000350697 A0A1W2PPI3 338 aa11.22□□□□□ -0.61
SEC13-202ENST00000350697 MEIS3P1A6NDR6 274 aa11.22□□□□□ -0.61
SEC13-202ENST00000350697 SULT1C2O00338 296 aa11.22□□□□□ -0.61
SEC13-202ENST00000350697 ST8SIA5O15466 376 aa11.22□□□□□ -0.61
SEC13-202ENST00000350697 TXNL1O43396 289 aa11.22□□□□□ -0.61
SEC13-202ENST00000350697 GPR137BO60478 399 aa11.22□□□□□ -0.61
SEC13-202ENST00000350697 ARPC4P59998 168 aa11.22□□□□□ -0.61
SEC13-202ENST00000350697 RPL15P61313 204 aaKnown RBP11.22□□□□□ -0.61
SEC13-202ENST00000350697 KRTAP24-1Q3LI83 254 aa11.22□□□□□ -0.61
SEC13-202ENST00000350697 GPX8Q8TED1 209 aa11.22□□□□□ -0.61
SEC13-202ENST00000350697 RTN4IP1Q8WWV3 396 aaPredicted RBP11.22□□□□□ -0.61
SEC13-202ENST00000350697 AGMATQ9BSE5 352 aa11.22□□□□□ -0.61
SEC13-202ENST00000350697 PIPOXQ9P0Z9 390 aa11.22□□□□□ -0.61
SEC13-202ENST00000350697 PITPNC1Q9UKF7 332 aa11.22□□□□□ -0.61
SEC13-202ENST00000350697 ANAPC10Q9UM13 185 aa11.22□□□□□ -0.61
SEC13-202ENST00000350697 TCF19Q9Y242 345 aa11.22□□□□□ -0.61
SEC13-202ENST00000350697 FBN1P35555 2871 aaKnown RBP11.21□□□□□ -0.61
SEC13-202ENST00000350697 TIMM23O14925 209 aa11.21□□□□□ -0.61
SEC13-202ENST00000350697 RAB29O14966 203 aa11.21□□□□□ -0.61
SEC13-202ENST00000350697 GSTZ1O43708 216 aaPredicted RBP11.21□□□□□ -0.61
SEC13-202ENST00000350697 LANCL1O43813 399 aa11.21□□□□□ -0.61
SEC13-202ENST00000350697 REG1BP48304 166 aa11.21□□□□□ -0.61
SEC13-202ENST00000350697 AP3S2P59780 193 aa11.21□□□□□ -0.61
SEC13-202ENST00000350697 LY6EQ16553 131 aa11.21□□□□□ -0.61
SEC13-202ENST00000350697 LIAT1Q6ZQX7 453 aa11.21□□□□□ -0.61
SEC13-202ENST00000350697 TGIF2LXQ8IUE1 241 aa11.21□□□□□ -0.61
SEC13-202ENST00000350697 ODF3L1Q8IXM7 274 aa11.21□□□□□ -0.61
SEC13-202ENST00000350697 H1FOOQ8IZA3 346 aaPredicted RBP11.21□□□□□ -0.61
SEC13-202ENST00000350697 SNAPC3Q92966 411 aa11.21□□□□□ -0.61
SEC13-202ENST00000350697 SAA2-SAA4A0A096LPE2 208 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 IGHV1-3A0A0C4DH29 117 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 FAM181BA6NEQ2 426 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 CENPXA8MT69 81 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 FCER2P06734 321 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 SAA2P0DJI9 122 aaPredicted RBP11.2□□□□□ -0.62
SEC13-202ENST00000350697 NAT1P18440 290 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 HABP2Q14520 560 aaPredicted RBP11.2□□□□□ -0.62
SEC13-202ENST00000350697 BAK1Q16611 211 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 FAM71F2Q6NXP2 309 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 ZNF833PQ6ZTB9 187 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 MOB3BQ86TA1 216 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 DRAM1Q8N682 238 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.2□□□□□ -0.62
SEC13-202ENST00000350697 OR56B4Q8NH76 319 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 DEDD2Q8WXF8 326 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 CFHR4Q92496 578 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 ABHD1Q96SE0 405 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 S1PR3Q99500 378 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 C7orf50Q9BRJ6 194 aaKnown RBP11.2□□□□□ -0.62
SEC13-202ENST00000350697 THAP7Q9BT49 309 aaPredicted RBP11.2□□□□□ -0.62
SEC13-202ENST00000350697 RAB18Q9NP72 206 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 NECAP2Q9NVZ3 263 aa11.2□□□□□ -0.62
SEC13-202ENST00000350697 A6NDX4 124 aa11.19□□□□□ -0.62
SEC13-202ENST00000350697 FAM90A9PA6NNJ1 464 aa11.19□□□□□ -0.62
SEC13-202ENST00000350697 RNF212BA8MTL3 300 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms