RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 LRRC37A5PQ49AS3 106 aa15.4■□□□□ 0.06
PTN-201ENST00000348225 LAMTOR1Q6IAA8 161 aa15.4■□□□□ 0.06
PTN-201ENST00000348225 SELENOHQ8IZQ5 122 aaKnown RBP15.4■□□□□ 0.06
PTN-201ENST00000348225 THAP6Q8TBB0 222 aa15.4■□□□□ 0.06
PTN-201ENST00000348225 RBPMSQ93062 196 aaKnown RBP15.4■□□□□ 0.06
PTN-201ENST00000348225 NEIL1Q96FI4 390 aaPredicted RBP15.4■□□□□ 0.06
PTN-201ENST00000348225 AGMATQ9BSE5 352 aa15.4■□□□□ 0.06
PTN-201ENST00000348225 ABHD14AQ9BUJ0 271 aa15.4■□□□□ 0.06
PTN-201ENST00000348225 RPUSD1Q9UJJ7 312 aaKnown RBP15.4■□□□□ 0.06
PTN-201ENST00000348225 RALYQ9UKM9 306 aaKnown RBP15.4■□□□□ 0.06
PTN-201ENST00000348225 BOLA1Q9Y3E2 137 aa15.4■□□□□ 0.06
PTN-201ENST00000348225 PET100P0DJ07 73 aa15.39■□□□□ 0.05
PTN-201ENST00000348225 SLC25A4P12235 298 aa15.39■□□□□ 0.05
PTN-201ENST00000348225 ZNF16P17020 682 aaPredicted RBP15.39■□□□□ 0.05
PTN-201ENST00000348225 PRAMEF5Q5TYX0 476 aa15.39■□□□□ 0.05
PTN-201ENST00000348225 C11orf87Q6NUJ2 197 aa15.39■□□□□ 0.05
PTN-201ENST00000348225 ZNF66Q6ZN08 573 aa15.39■□□□□ 0.05
PTN-201ENST00000348225 ABHD14BQ96IU4 210 aa15.39■□□□□ 0.05
PTN-201ENST00000348225 PLSCR3Q9NRY6 295 aa15.39■□□□□ 0.05
PTN-201ENST00000348225 SDHAF2Q9NX18 166 aa15.39■□□□□ 0.05
PTN-201ENST00000348225 GSKIPQ9P0R6 139 aa15.39■□□□□ 0.05
PTN-201ENST00000348225 MPC2O95563 127 aa15.39■□□□□ 0.05
PTN-201ENST00000348225 C4BPBP20851 252 aa15.39■□□□□ 0.05
PTN-201ENST00000348225 Q3ZCU0 254 aa15.39■□□□□ 0.05
PTN-201ENST00000348225 HEPN1Q6WQI6 88 aa15.39■□□□□ 0.05
PTN-201ENST00000348225 TCTEX1D1Q8N7M0 179 aa15.39■□□□□ 0.05
PTN-201ENST00000348225 HSD17B10Q99714 261 aaKnown RBP15.39■□□□□ 0.05
PTN-201ENST00000348225 SPIN2AQ99865 258 aa15.39■□□□□ 0.05
PTN-201ENST00000348225 SPIN2BQ9BPZ2 258 aa15.39■□□□□ 0.05
PTN-201ENST00000348225 MYO18BQ8IUG5 2567 aa15.38■□□□□ 0.05
PTN-201ENST00000348225 FLNCQ14315 2725 aa15.38■□□□□ 0.05
PTN-201ENST00000348225 A0A1W2PPH5 198 aa15.38■□□□□ 0.05
PTN-201ENST00000348225 OVOL3O00110 214 aa15.38■□□□□ 0.05
PTN-201ENST00000348225 CCL3L1P16619 93 aa15.38■□□□□ 0.05
PTN-201ENST00000348225 GPR6P46095 362 aaPredicted RBP15.38■□□□□ 0.05
PTN-201ENST00000348225 SRSF1Q07955 248 aaKnown RBP eCLIP15.38■□□□□ 0.05
PTN-201ENST00000348225 EIF4EBP1Q13541 118 aaPredicted RBP15.38■□□□□ 0.05
PTN-201ENST00000348225 ESCO2Q56NI9 601 aa15.38■□□□□ 0.05
PTN-201ENST00000348225 ZNF841Q6ZN19 808 aa15.38■□□□□ 0.05
PTN-201ENST00000348225 ZBTB8BQ8NAP8 495 aaPredicted RBP15.38■□□□□ 0.05
PTN-201ENST00000348225 IFI27L2Q9H2X8 130 aa15.38■□□□□ 0.05
PTN-201ENST00000348225 UBR5O95071 2799 aaPredicted RBP15.38■□□□□ 0.05
PTN-201ENST00000348225 FAM208BQ5VWN6 2430 aa15.38■□□□□ 0.05
PTN-201ENST00000348225 CHD6Q8TD26 2715 aa15.37■□□□□ 0.05
PTN-201ENST00000348225 USP9XQ93008 2570 aaPredicted RBP15.37■□□□□ 0.05
PTN-201ENST00000348225 ARPC5O15511 151 aa15.37■□□□□ 0.05
PTN-201ENST00000348225 COX6B1P14854 86 aa15.37■□□□□ 0.05
PTN-201ENST00000348225 RPA2P15927 270 aa15.37■□□□□ 0.05
PTN-201ENST00000348225 VDAC1P21796 283 aa15.37■□□□□ 0.05
PTN-201ENST00000348225 LGALSLQ3ZCW2 172 aaPredicted RBP15.37■□□□□ 0.05
PTN-201ENST00000348225 TMEM65Q6PI78 240 aa15.37■□□□□ 0.05
PTN-201ENST00000348225 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.37■□□□□ 0.05
PTN-201ENST00000348225 C5orf30Q96GV9 206 aa15.37■□□□□ 0.05
PTN-201ENST00000348225 FAM212BQ9NTI7 297 aaPredicted RBP15.37■□□□□ 0.05
PTN-201ENST00000348225 GAB2Q9UQC2 676 aa15.37■□□□□ 0.05
PTN-201ENST00000348225 L7N2F9 121 aa15.36■□□□□ 0.05
PTN-201ENST00000348225 CLDN1O95832 211 aa15.36■□□□□ 0.05
PTN-201ENST00000348225 ZNF134P52741 427 aa15.36■□□□□ 0.05
PTN-201ENST00000348225 IL15RAQ13261 267 aa15.36■□□□□ 0.05
PTN-201ENST00000348225 BTNL3Q6UXE8 466 aa15.36■□□□□ 0.05
PTN-201ENST00000348225 ZNF546Q86UE3 836 aa15.36■□□□□ 0.05
PTN-201ENST00000348225 ZNF439Q8NDP4 499 aa15.36■□□□□ 0.05
PTN-201ENST00000348225 TCTEX1D2Q8WW35 142 aa15.36■□□□□ 0.05
PTN-201ENST00000348225 LEAP2Q969E1 77 aa15.36■□□□□ 0.05
PTN-201ENST00000348225 CCL19Q99731 98 aa15.36■□□□□ 0.05
PTN-201ENST00000348225 ZFP57Q9NU63 452 aa15.36■□□□□ 0.05
PTN-201ENST00000348225 RAB29O14966 203 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 MMP23AO75900 390 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 IGHV3-7P01780 117 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 S100A10P60903 97 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 SMCO1Q147U7 214 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 CT45A1Q5HYN5 189 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 WDR25Q64LD2 544 aaPredicted RBP15.35■□□□□ 0.05
PTN-201ENST00000348225 THOC7Q6I9Y2 204 aaKnown RBP15.35■□□□□ 0.05
PTN-201ENST00000348225 CT45A3Q8NHU0 189 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 RNASE11Q8TAA1 199 aaKnown RBP15.35■□□□□ 0.05
PTN-201ENST00000348225 GON7Q9BXV9 100 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 SLA2Q9H6Q3 261 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 PATZ1Q9HBE1 687 aaKnown RBP15.35■□□□□ 0.05
PTN-201ENST00000348225 MBD2Q9UBB5 411 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 SLC31A2O15432 143 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 NDUFS7O75251 213 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 GNG10P50151 68 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 RAB32Q13637 225 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 PRSS54Q6PEW0 395 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 SLC25A48Q6ZT89 311 aaKnown RBP15.35■□□□□ 0.05
PTN-201ENST00000348225 IGFBPL1Q8WX77 278 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 MFFQ9GZY8 342 aa15.35■□□□□ 0.05
PTN-201ENST00000348225 YLPM1P49750 1951 aaKnown RBP15.34■□□□□ 0.05
PTN-201ENST00000348225 M0R1X1 148 aa15.34■□□□□ 0.05
PTN-201ENST00000348225 ATG12O94817 140 aa15.34■□□□□ 0.05
PTN-201ENST00000348225 CXCL2P19875 107 aa15.34■□□□□ 0.05
PTN-201ENST00000348225 DLX6P56179 175 aa15.34■□□□□ 0.05
PTN-201ENST00000348225 GNB2P62879 340 aa15.34■□□□□ 0.05
PTN-201ENST00000348225 RPL30P62888 115 aaKnown RBP15.34■□□□□ 0.05
PTN-201ENST00000348225 NMSQ5H8A3 153 aa15.34■□□□□ 0.05
PTN-201ENST00000348225 SPAG16Q8N0X2 631 aa15.34■□□□□ 0.05
PTN-201ENST00000348225 C8orf46Q8TAG6 207 aa15.34■□□□□ 0.05
PTN-201ENST00000348225 CD300LFQ8TDQ1 290 aa15.34■□□□□ 0.05
PTN-201ENST00000348225 LSM10Q969L4 123 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms