RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 DAZAP2Q15038 168 aaPredicted RBP13.05□□□□□ -0.32
LMNA-201ENST00000347559 MCEMP1Q8IX19 187 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 DEFB119Q8N690 84 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 ADPRHL1Q8NDY3 354 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 CADM4Q8NFZ8 388 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 PTPRSQ13332 1948 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 CBY3A6NI87 242 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 RBFOX2O43251 390 aaKnown RBP eCLIP13.04□□□□□ -0.325e-8■■■□□ 15.8
LMNA-201ENST00000347559 IGKV1-39P01597 117 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 IGKV1D-39P04432 117 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 IGHV4-34P06331 123 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 MNX1P50219 401 aaPredicted RBP13.04□□□□□ -0.32
LMNA-201ENST00000347559 GNB1P62873 340 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 DEFB133Q30KQ1 61 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 ACSF3Q4G176 576 aaPredicted RBP13.04□□□□□ -0.32
LMNA-201ENST00000347559 STARD4Q96DR4 205 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 MRPL18Q9H0U6 180 aaKnown RBP13.04□□□□□ -0.32
LMNA-201ENST00000347559 KCNS2Q9ULS6 477 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 RNF24Q9Y225 148 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 NKX6-3A6NJ46 265 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 CA3P07451 260 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 BLKP51451 505 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 APH1AQ96BI3 265 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 CCDC74BQ96LY2 380 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 REPIN1Q9BWE0 567 aaKnown RBP13.04□□□□□ -0.32
LMNA-201ENST00000347559 LAMTOR2Q9Y2Q5 125 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 CBR3O75828 277 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 IGKV1-5P01602 117 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 TFF3Q07654 80 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.04□□□□□ -0.32
LMNA-201ENST00000347559 ATOH7Q8N100 152 aa13.04□□□□□ -0.32
LMNA-201ENST00000347559 F6UZH7 168 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 HS3ST1O14792 307 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 TUSC2O75896 110 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 ERASQ7Z444 233 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 LYG1Q8N1E2 194 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 RDH5Q92781 318 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 KLHDC7BQ96G42 594 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 SFRP2Q96HF1 295 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 ALKBH3Q96Q83 286 aaPredicted RBP13.03□□□□□ -0.32
LMNA-201ENST00000347559 ALKBH7Q9BT30 221 aaPredicted RBP13.03□□□□□ -0.32
LMNA-201ENST00000347559 CFAP54Q96N23 3096 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 KIR2DS1A0A191URI9 304 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 FCN1O00602 326 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 SPINK4O60575 86 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 SERPINA7P05543 415 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 FRMD6-AS1P0C7T7 363 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 PMCHP20382 165 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 S100A7P31151 101 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 KIR2DS4P43632 304 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 COMPP49747 757 aaPredicted RBP13.03□□□□□ -0.32
LMNA-201ENST00000347559 LHX2P50458 406 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 KIR2DS1Q14954 304 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 OR4B1Q8NGF8 309 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 ZNF296Q8WUU4 475 aaPredicted RBP13.03□□□□□ -0.32
LMNA-201ENST00000347559 OR5P3Q8WZ94 311 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 WNT10AQ9GZT5 417 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 ABCA7Q8IZY2 2146 aa13.03□□□□□ -0.32
LMNA-201ENST00000347559 SLC17A3O00476 420 aa13.02□□□□□ -0.32
LMNA-201ENST00000347559 MLNRO43193 412 aa13.02□□□□□ -0.32
LMNA-201ENST00000347559 B4GALT1P15291 398 aa13.02□□□□□ -0.32
LMNA-201ENST00000347559 COX5AP20674 150 aa13.02□□□□□ -0.32
LMNA-201ENST00000347559 IER3P46695 156 aa13.02□□□□□ -0.32
LMNA-201ENST00000347559 KLF3P57682 345 aaPredicted RBP13.02□□□□□ -0.32
LMNA-201ENST00000347559 OR1F12Q8NHA8 337 aa13.02□□□□□ -0.32
LMNA-201ENST00000347559 ZNF586Q9NXT0 402 aa13.02□□□□□ -0.32
LMNA-201ENST00000347559 KRASP01116 189 aa13.02□□□□□ -0.33
LMNA-201ENST00000347559 FOXL1Q12952 345 aa13.02□□□□□ -0.33
LMNA-201ENST00000347559 SSPNQ14714 243 aa13.02□□□□□ -0.33
LMNA-201ENST00000347559 ITGB1BP1O14713 200 aa13.02□□□□□ -0.33
LMNA-201ENST00000347559 WDR1O75083 606 aa13.02□□□□□ -0.33
LMNA-201ENST00000347559 ZNF32P17041 273 aa13.02□□□□□ -0.33
LMNA-201ENST00000347559 CRYGSP22914 178 aa13.02□□□□□ -0.33
LMNA-201ENST00000347559 C20orf204Q6ZNR8 217 aa13.02□□□□□ -0.33
LMNA-201ENST00000347559 Q6ZSR3 168 aa13.02□□□□□ -0.33
LMNA-201ENST00000347559 IL23AQ9NPF7 189 aa13.02□□□□□ -0.33
LMNA-201ENST00000347559 UQCR10Q9UDW1 63 aa13.02□□□□□ -0.33
LMNA-201ENST00000347559 OR2W1Q9Y3N9 320 aa13.02□□□□□ -0.33
LMNA-201ENST00000347559 FER1L5A0AVI2 2057 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 SIRPB1O00241 398 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 AMTP48728 403 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 ATP6V1FQ16864 119 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 GCSAMLQ5JQS6 135 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 C10orf128Q5T292 105 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 OR2M3Q8NG83 312 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 CLDN23Q96B33 292 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 OR1A1Q9P1Q5 309 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 CLN8Q9UBY8 286 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 ATP23Q9Y6H3 246 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 TRAV38-1A0A0B4J264 116 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 HYPMO75409 117 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 GABRG2P18507 467 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 CCNOP22674 350 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 OR1D5P58170 312 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 RNPS1Q15287 305 aaKnown RBP13.01□□□□□ -0.33
LMNA-201ENST00000347559 KIAA1644Q3SXP7 199 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 SPINK9Q5DT21 86 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 AGBL5Q8NDL9 886 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 OR4C5Q8NGB2 326 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 MTIF3Q9H2K0 278 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms