RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 CHD3Q12873 2000 aaKnown RBP13.29□□□□□ -0.28
LRP8-202ENST00000347547 TRBV6-6A0A0A6YYG2 114 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 C20orf202A1L168 122 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 C1QTNF9BB2RNN3 333 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 C11orf94C9JXX5 98 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 KRASP01116 189 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 CD33P20138 364 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 CTRLP40313 264 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 CDKN1BP46527 198 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 KLF3P57682 345 aaPredicted RBP13.29□□□□□ -0.28
LRP8-202ENST00000347547 SPANXN5Q5MJ07 72 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 LEMD1Q68G75 181 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 OR10G3Q8NGC4 313 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 OR51H1Q8NH63 302 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 KLHDC7BQ96G42 594 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 ZDHHC11Q9H8X9 412 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 FOXJ2Q9P0K8 574 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 TRBV11-1A0A0K0K1C0 115 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 NKX6-3A6NJ46 265 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 NDUFB8O95169 186 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 SERPINA7P05543 415 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 COX5AP20674 150 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 IGFBP4P22692 258 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 ARL4DP49703 201 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 FGF12P61328 243 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 TLE1Q04724 770 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 Q0VG73 95 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 SGMS2Q8NHU3 365 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 VN1R17PQ8TDU5 208 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 GMPPAQ96IJ6 420 aaPredicted RBP13.29□□□□□ -0.28
LRP8-202ENST00000347547 CIB3Q96Q77 187 aaPredicted RBP13.29□□□□□ -0.28
LRP8-202ENST00000347547 TMEM147Q9BVK8 224 aa13.29□□□□□ -0.28
LRP8-202ENST00000347547 NPIPA2E9PIF3 369 aa13.28□□□□□ -0.28
LRP8-202ENST00000347547 NPIPA3F8WFD2 350 aa13.28□□□□□ -0.28
LRP8-202ENST00000347547 HMGB3O15347 200 aaKnown RBP13.28□□□□□ -0.28
LRP8-202ENST00000347547 SERF1AO75920 110 aa13.28□□□□□ -0.28
LRP8-202ENST00000347547 PRSS12P56730 875 aa13.28□□□□□ -0.28
LRP8-202ENST00000347547 RNASE8Q8TDE3 154 aaKnown RBP13.28□□□□□ -0.28
LRP8-202ENST00000347547 SFRP2Q96HF1 295 aa13.28□□□□□ -0.28
LRP8-202ENST00000347547 RNF2Q99496 336 aa13.28□□□□□ -0.28
LRP8-202ENST00000347547 SPEGQ15772 3267 aa13.28□□□□□ -0.28
LRP8-202ENST00000347547 GRIFINA4D1Z8 144 aa13.28□□□□□ -0.28
LRP8-202ENST00000347547 MPLP40238 635 aa13.28□□□□□ -0.28
LRP8-202ENST00000347547 GNB1P62873 340 aa13.28□□□□□ -0.28
LRP8-202ENST00000347547 SHISA6Q6ZSJ9 500 aa13.28□□□□□ -0.28
LRP8-202ENST00000347547 LRP11Q86VZ4 500 aa13.28□□□□□ -0.28
LRP8-202ENST00000347547 PIGCQ92535 297 aa13.28□□□□□ -0.28
LRP8-202ENST00000347547 F6UZH7 168 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 CBR3O75828 277 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 CRISP2P16562 243 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 SSPNQ14714 243 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 FFAR4Q5NUL3 377 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 TCF23Q7RTU1 214 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 Q8N976 141 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 CLDN23Q96B33 292 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 PATZ1Q9HBE1 687 aaKnown RBP13.27□□□□□ -0.29
LRP8-202ENST00000347547 KCNIP2Q9NS61 270 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 NPIPB11E5RHQ5 1161 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 TOMM40O96008 361 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 BCL3P20749 454 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 C1orf174Q8IYL3 243 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 ZIC4Q8N9L1 334 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 OR5T1Q8NG75 326 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 SPSB4Q96A44 273 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 ZNF837Q96EG3 531 aaPredicted RBP13.27□□□□□ -0.29
LRP8-202ENST00000347547 UQCR10Q9UDW1 63 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 MMP17Q9ULZ9 603 aa13.27□□□□□ -0.29
LRP8-202ENST00000347547 IGLV3-12A0A075B6K2 115 aa13.26□□□□□ -0.29
LRP8-202ENST00000347547 CCL25O15444 150 aa13.26□□□□□ -0.29
LRP8-202ENST00000347547 C1QTNF9P0C862 333 aa13.26□□□□□ -0.29
LRP8-202ENST00000347547 STPG4Q8N801 248 aa13.26□□□□□ -0.29
LRP8-202ENST00000347547 KCNE4Q8WWG9 221 aa13.26□□□□□ -0.29
LRP8-202ENST00000347547 PHF7Q9BWX1 381 aaPredicted RBP13.26□□□□□ -0.29
LRP8-202ENST00000347547 ZNF703Q9H7S9 590 aaPredicted RBP13.26□□□□□ -0.29
LRP8-202ENST00000347547 IGLV3-19P01714 112 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 CD38P28907 300 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 MMDQ15546 238 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 ZNF585BQ52M93 769 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 OR1K1Q8NGR3 316 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 LMX1AQ8TE12 382 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 MDFIC2A0A1B0GVS7 189 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 DEGS1O15121 323 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 IGLV2-14P01704 120 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 PTTG1IPP53801 180 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 FOXL2P58012 376 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 OR1D5P58170 312 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 VWC2Q2TAL6 325 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 FAM69BQ5VUD6 431 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 OR8G2PQ6IF36 304 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 TXNDC17Q9BRA2 123 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 LIN7CQ9NUP9 197 aaKnown RBP13.25□□□□□ -0.29
LRP8-202ENST00000347547 TMEM38BQ9NVV0 291 aa13.25□□□□□ -0.29
LRP8-202ENST00000347547 RBFOX2O43251 390 aaKnown RBP eCLIP13.24□□□□□ -0.297e-7■■■■■ 98.8
LRP8-202ENST00000347547 DKK1O94907 266 aa13.24□□□□□ -0.29
LRP8-202ENST00000347547 OR5G3P0C626 314 aa13.24□□□□□ -0.29
LRP8-202ENST00000347547 KITLGP21583 273 aa13.24□□□□□ -0.29
LRP8-202ENST00000347547 TRIP6Q15654 476 aaKnown RBP13.24□□□□□ -0.29
LRP8-202ENST00000347547 ZNF586Q9NXT0 402 aa13.24□□□□□ -0.29
LRP8-202ENST00000347547 ERRFI1Q9UJM3 462 aaPredicted RBP13.24□□□□□ -0.29
LRP8-202ENST00000347547 FBXL7Q9UJT9 491 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms