RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 TCRBP04435 133 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 PGAM2P15259 253 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 GATA3P23771 443 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 GNRHRP30968 328 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 UCP3P55916 312 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 RGS21Q2M5E4 152 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 Q3ZCU0 254 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 LINC00311Q8N616 119 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 C8orf31Q8N9H6 132 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 DUSP18Q8NEJ0 188 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 OR11H6Q8NGC7 330 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 ENKURQ8TC29 256 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 EDARADDQ8WWZ3 215 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 UPRTQ96BW1 309 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 GPHA2Q96T91 129 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 OR2D2Q9H210 308 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 HEXA-AS1Q9H8Q6 139 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 GPR132Q9UNW8 380 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 RBM7Q9Y580 266 aaKnown RBP15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 HIVEP1P15822 2718 aa15.45■□□□□ 0.06
CHMP4A-201ENST00000347519 CENPVL3A0A0U1RRI6 287 aa15.44■□□□□ 0.06
CHMP4A-201ENST00000347519 ODF3BA8MYP8 253 aa15.44■□□□□ 0.06
CHMP4A-201ENST00000347519 PTTG1O95997 202 aa15.44■□□□□ 0.06
CHMP4A-201ENST00000347519 RBMS2Q15434 407 aaKnown RBP15.44■□□□□ 0.06
CHMP4A-201ENST00000347519 KLF17Q5JT82 389 aaPredicted RBP15.44■□□□□ 0.06
CHMP4A-201ENST00000347519 ZNF626Q68DY1 528 aa15.44■□□□□ 0.06
CHMP4A-201ENST00000347519 ZNF818PQ6ZRF7 136 aa15.44■□□□□ 0.06
CHMP4A-201ENST00000347519 LYG1Q8N1E2 194 aa15.44■□□□□ 0.06
CHMP4A-201ENST00000347519 OR4P4Q8NGL7 312 aa15.44■□□□□ 0.06
CHMP4A-201ENST00000347519 RTBDNQ9BSG5 229 aaPredicted RBP15.44■□□□□ 0.06
CHMP4A-201ENST00000347519 RSRP1Q9BUV0 290 aa15.44■□□□□ 0.06
CHMP4A-201ENST00000347519 KCNS2Q9ULS6 477 aa15.44■□□□□ 0.06
CHMP4A-201ENST00000347519 ACANP16112 2415 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 TRAV6A0A075B6T7 132 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 TOR1AO14656 332 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 ARPC1BO15143 372 aaKnown RBP15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 ARG1P05089 322 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 IGHV4-38-2P0DP08 117 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 RIPPLY3P57055 190 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 DIAPH2-AS1Q14236 149 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 HLA-DRB5Q30154 266 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 RPL39P5Q59GN2 51 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 RUSC1-AS1Q66K80 236 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 NCR3LG1Q68D85 454 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 DRAM1Q8N682 238 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 ADAD2Q8NCV1 583 aaKnown RBP15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 C18orf12Q96KH6 178 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 SMR3AQ99954 134 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 SLC25A21Q9BQT8 299 aaPredicted RBP15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 ZNF251Q9BRH9 671 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 C20orf85Q9H1P6 137 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 C5orf66Q9H5L9 145 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 SDHAF2Q9NX18 166 aa15.43■□□□□ 0.06
CHMP4A-201ENST00000347519 SAA2-SAA4A0A096LPE2 208 aa15.42■□□□□ 0.06
CHMP4A-201ENST00000347519 J3QLI3 93 aa15.42■□□□□ 0.06
CHMP4A-201ENST00000347519 SAA2P0DJI9 122 aaPredicted RBP15.42■□□□□ 0.06
CHMP4A-201ENST00000347519 RAB7AP51149 207 aa15.42■□□□□ 0.06
CHMP4A-201ENST00000347519 LINC00205P59089 165 aa15.42■□□□□ 0.06
CHMP4A-201ENST00000347519 OXA1LQ15070 435 aa15.42■□□□□ 0.06
CHMP4A-201ENST00000347519 PHLDA2Q53GA4 152 aa15.42■□□□□ 0.06
CHMP4A-201ENST00000347519 CCBE1Q6UXH8 406 aaPredicted RBP15.42■□□□□ 0.06
CHMP4A-201ENST00000347519 LHFPL4Q7Z7J7 247 aa15.42■□□□□ 0.06
CHMP4A-201ENST00000347519 ZDHHC22Q8N966 263 aa15.42■□□□□ 0.06
CHMP4A-201ENST00000347519 BEND2Q8NDZ0 799 aa15.42■□□□□ 0.06
CHMP4A-201ENST00000347519 C17orf50Q8WW18 174 aa15.42■□□□□ 0.06
CHMP4A-201ENST00000347519 TMEM230Q96A57 120 aa15.42■□□□□ 0.06
CHMP4A-201ENST00000347519 NUDT15Q9NV35 164 aa15.42■□□□□ 0.06
CHMP4A-201ENST00000347519 SOX21Q9Y651 276 aaPredicted RBP15.42■□□□□ 0.06
CHMP4A-201ENST00000347519 TRAV40A0A0B4J280 105 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 LY6LH3BQJ8 138 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 CD5LO43866 347 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 CTSDP07339 412 aaPredicted RBP15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 PAX6P26367 422 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 GPR12P47775 334 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 UBE2E1P51965 193 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 PRRX1P54821 245 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 RAB25P57735 213 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 EIF4EBP1Q13541 118 aaPredicted RBP15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 SLC38A6Q8IZM9 456 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 CENPSQ8N2Z9 138 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 ZNF645Q8N7E2 425 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 OR10X1Q8NGY0 326 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 CHPT1Q8WUD6 406 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 ST6GALNAC6Q969X2 333 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 RBMXL1Q96E39 390 aaKnown RBP15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 AJUBAQ96IF1 538 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 TMUB1Q9BVT8 246 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 BEX2Q9BXY8 128 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 BEX1Q9HBH7 125 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 NUBP2Q9Y5Y2 271 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 SVEP1Q4LDE5 3571 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 CSPG4Q6UVK1 2322 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 C2CD3Q4AC94 2353 aa15.41■□□□□ 0.06
CHMP4A-201ENST00000347519 IGHV1-69DA0A0B4J2H0 117 aa15.4■□□□□ 0.06
CHMP4A-201ENST00000347519 BUB1B-PAK6H3BSN5 160 aa15.4■□□□□ 0.06
CHMP4A-201ENST00000347519 TNFSF12O43508 249 aa15.4■□□□□ 0.06
CHMP4A-201ENST00000347519 IGHV1-69P01742 117 aa15.4■□□□□ 0.06
CHMP4A-201ENST00000347519 RLN1P04808 185 aa15.4■□□□□ 0.06
CHMP4A-201ENST00000347519 H2AFB2P0C5Z0 115 aa15.4■□□□□ 0.06
CHMP4A-201ENST00000347519 VSIG10L2P0DP72 767 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms