RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 CCSO14618 274 aa9.03□□□□□ -0.96
ECM1-201ENST00000346569 PHF1O43189 567 aaPredicted RBP9.03□□□□□ -0.96
ECM1-201ENST00000346569 B3GALNT1O75752 331 aa9.03□□□□□ -0.96
ECM1-201ENST00000346569 RGS11O94810 467 aa9.03□□□□□ -0.96
ECM1-201ENST00000346569 COX6B1P14854 86 aa9.03□□□□□ -0.96
ECM1-201ENST00000346569 NKX2-5P52952 324 aaPredicted RBP9.03□□□□□ -0.96
ECM1-201ENST00000346569 ERVFRD-1P60508 538 aa9.03□□□□□ -0.96
ECM1-201ENST00000346569 LTC4SQ16873 150 aa9.03□□□□□ -0.96
ECM1-201ENST00000346569 CT45A1Q5HYN5 189 aa9.03□□□□□ -0.96
ECM1-201ENST00000346569 LY6G5BQ8NDX9 201 aa9.03□□□□□ -0.96
ECM1-201ENST00000346569 OR2T35Q8NGX2 323 aa9.03□□□□□ -0.96
ECM1-201ENST00000346569 CT45A3Q8NHU0 189 aa9.03□□□□□ -0.96
ECM1-201ENST00000346569 LHFPL5Q8TAF8 219 aa9.03□□□□□ -0.96
ECM1-201ENST00000346569 SEC22AQ96IW7 307 aa9.03□□□□□ -0.96
ECM1-201ENST00000346569 C18orf12Q96KH6 178 aa9.03□□□□□ -0.96
ECM1-201ENST00000346569 ZNF714Q96N38 554 aa9.03□□□□□ -0.96
ECM1-201ENST00000346569 C17orf98A8MV24 154 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 MPTX1A8MV57 137 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 H0Y980 276 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 IGHV4-39P01824 125 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 HOXB5P09067 269 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 CCL3L1P16619 93 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 DNASE1P24855 282 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 S100GP29377 79 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 GPR6P46095 362 aaPredicted RBP9.02□□□□□ -0.97
ECM1-201ENST00000346569 BRWD1-AS2P59051 145 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 Q3ZCU0 254 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 ZNF585BQ52M93 769 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 LYZL2Q7Z4W2 148 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 SELENOHQ8IZQ5 122 aaKnown RBP9.02□□□□□ -0.97
ECM1-201ENST00000346569 LGI3Q8N145 548 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 OR8B3Q8NGG8 313 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 H1FXQ92522 213 aaKnown RBP9.02□□□□□ -0.97
ECM1-201ENST00000346569 ABHD14BQ96IU4 210 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 OR10C1Q96KK4 312 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 HYLS1Q96M11 299 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 OR8B2Q96RD0 313 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 OR2D2Q9H210 308 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 GAL3ST2Q9H3Q3 398 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 SDHAF2Q9NX18 166 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 PSG11Q9UQ72 335 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 DCHS2Q6V1P9 2916 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 AKAP9Q99996 3911 aa9.02□□□□□ -0.97
ECM1-201ENST00000346569 AKAP6Q13023 2319 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 SLC31A2O15432 143 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 ST8SIA5O15466 376 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 TNFSF12O43508 249 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 PAX1P15863 534 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 RPL30P62888 115 aaKnown RBP9.01□□□□□ -0.97
ECM1-201ENST00000346569 CYCSP99999 105 aaKnown RBP9.01□□□□□ -0.97
ECM1-201ENST00000346569 PRAMEF5Q5TYX0 476 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 GGNBP1Q5YKI7 109 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 LAMTOR1Q6IAA8 161 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 GSG1LQ6UXU4 331 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 ZNF66Q6ZN08 573 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 C1orf229Q6ZS94 237 aaPredicted RBP9.01□□□□□ -0.97
ECM1-201ENST00000346569 SLC25A48Q6ZT89 311 aaKnown RBP9.01□□□□□ -0.97
ECM1-201ENST00000346569 ODF3L1Q8IXM7 274 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 ZNF596Q8TC21 504 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 IL22RA2Q969J5 263 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 C2orf50Q96LR7 162 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 ZNF251Q9BRH9 671 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 NMES1Q9C002 83 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 IFI27L2Q9H2X8 130 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 METTL8Q9H825 291 aaKnown RBP9.01□□□□□ -0.97
ECM1-201ENST00000346569 FAM212BQ9NTI7 297 aaPredicted RBP9.01□□□□□ -0.97
ECM1-201ENST00000346569 DOCK11Q5JSL3 2073 aa9.01□□□□□ -0.97
ECM1-201ENST00000346569 NOTCH2Q04721 2471 aa9□□□□□ -0.97
ECM1-201ENST00000346569 A0A087X0M5 115 aa9□□□□□ -0.97
ECM1-201ENST00000346569 TRAV14DV4A0A0A6YYC5 116 aa9□□□□□ -0.97
ECM1-201ENST00000346569 C13orf42A0A1B0GVH6 325 aa9□□□□□ -0.97
ECM1-201ENST00000346569 A0A1B0GX30 115 aa9□□□□□ -0.97
ECM1-201ENST00000346569 C5orf51A6NDU8 294 aa9□□□□□ -0.97
ECM1-201ENST00000346569 IGKV1-39P01597 117 aa9□□□□□ -0.97
ECM1-201ENST00000346569 IGHV3-7P01780 117 aa9□□□□□ -0.97
ECM1-201ENST00000346569 IGKV1D-39P04432 117 aa9□□□□□ -0.97
ECM1-201ENST00000346569 RAB7AP51149 207 aa9□□□□□ -0.97
ECM1-201ENST00000346569 LMO4P61968 165 aa9□□□□□ -0.97
ECM1-201ENST00000346569 SRPXP78539 464 aa9□□□□□ -0.97
ECM1-201ENST00000346569 LINC00311Q8N616 119 aa9□□□□□ -0.97
ECM1-201ENST00000346569 ZNF525Q8N782 197 aa9□□□□□ -0.97
ECM1-201ENST00000346569 TCTEX1D1Q8N7M0 179 aa9□□□□□ -0.97
ECM1-201ENST00000346569 C8orf31Q8N9H6 132 aa9□□□□□ -0.97
ECM1-201ENST00000346569 LEAP2Q969E1 77 aa9□□□□□ -0.97
ECM1-201ENST00000346569 CCL19Q99731 98 aa9□□□□□ -0.97
ECM1-201ENST00000346569 KCNS2Q9ULS6 477 aa9□□□□□ -0.97
ECM1-201ENST00000346569 TMED3Q9Y3Q3 217 aa9□□□□□ -0.97
ECM1-201ENST00000346569 FBN2P35556 2912 aa9□□□□□ -0.97
ECM1-201ENST00000346569 PPIAL4CA0A0B4J2A2 164 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 DUXBA0A1W2PPF3 345 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 LINC00473A8K010 186 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 RNF212BA8MTL3 300 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 FAM25EA8MYX2 175 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 C22orf46C9J442 243 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 IFNA21P01568 189 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 IGHV2-5P01817 119 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 RBP4P02753 201 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 PPIAL4GP0DN37 164 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 SLC25A4P12235 298 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 NFYBP25208 207 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms